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VAB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C8C9sing1.37Å1.39ÅAromatic
C8C7doub1.41Å1.40ÅAromatic
C9C10doub1.39Å1.40ÅAromatic
C11C10sing1.38Å1.40ÅAromatic
C11C12doub1.39Å1.38ÅAromatic
C7C12sing1.40Å1.40ÅAromatic
C7N6sing1.35Å1.40ÅAromatic
C10N14sing1.40Å1.42Å
C12S13sing1.76Å1.74ÅAromatic
C5N6doub1.29Å1.29ÅAromatic
C5S13sing1.76Å1.75ÅAromatic
C5S4sing1.76Å1.75Å
C1C2doub1.31Å1.27Å
C2C3sing1.51Å1.52Å
C15C17sing1.51Å1.50Å
C15N14sing1.35Å1.37Å
C15O16doub1.21Å1.24Å
C19C18sing1.51Å1.49Å
C19O20doub1.21Å1.22Å
C19O21sing1.34Å1.31Å
C3S4sing1.81Å1.83Å
C17C18sing1.53Å1.53Å
C8H8sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C11H11sing1.08Å1.08Å
N14H14sing0.97Å1.00Å
C1H11Csing1.08Å1.08Å
C1H12Csing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C3H31Csing1.09Å1.10Å
C3H32Csing1.09Å1.10Å
C17H171sing1.09Å1.10Å
C17H172sing1.09Å1.10Å
C18H181sing1.09Å1.10Å
C18H182sing1.09Å1.10Å
O21H21sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C9C8C7119.7°120.5°
C8C9C10120.8°120.6°
C9C8H8120.2°119.7°
C8C9H9119.6°119.7°
C8C7C12118.7°118.5°
C8C7N6126.3°128.6°
C7C8H8120.1°119.8°
C9C10C11119.9°119.8°
C9C10N14120.2°120.1°
C10C9H9119.6°119.7°
C10C11C12118.8°120.1°
C11C10N14119.9°120.1°
C10C11H11120.6°119.9°
C11C12C7122.1°120.4°
C11C12S13128.2°131.1°
C12C11H11120.6°119.9°
C12C7N6115.0°112.8°
C7C12S13109.6°108.4°
C7N6C5110.3°117.8°
C10N14C15127.2°120.0°
C10N14H14116.4°120.0°
C12S13C588.4°90.4°
N6C5S13116.7°110.4°
N6C5S4122.3°124.8°
S13C5S4121.0°124.8°
C5S4C3104.4°100.0°
C1C2C3125.0°120.0°
C2C1H11C120.0°120.0°
C2C1H12C120.0°120.0°
C1C2H2117.4°120.0°
C2C3S4113.0°109.5°
C3C2H2117.5°120.0°
C2C3H31C108.6°109.5°
C2C3H32C108.6°109.5°
C17C15N14114.8°120.0°
C17C15O16122.2°120.0°
C15C17C18112.8°109.5°
C15C17H171108.6°109.4°
C15C17H172108.6°109.5°
N14C15O16123.0°120.0°
C15N14H14116.4°120.0°
C18C19O20118.4°120.0°
C18C19O21120.0°120.0°
C19C18C17115.1°109.5°
C19C18H181108.0°109.5°
C19C18H182108.0°109.5°
O20C19O21121.6°120.0°
C19O21H21109.5°116.9°
S4C3H31C108.6°109.5°
S4C3H32C108.6°109.5°
C18C17H171108.6°109.5°
C18C17H172108.6°109.5°
C17C18H181108.1°109.5°
C17C18H182108.1°109.5°
H11CC1H12C120.0°119.9°
H31CC3H32C109.4°109.5°
H171C17H172109.5°109.5°
H181C18H182109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C9C8C7H8180.0°179.7°
C8C9C10H9180.0°180.0°
C8C9C10C110.2°0.0°
C9C8C7C120.1°0.0°
C9C8C7N6179.9°180.0°
C8C9C10N14179.6°180.0°
C7C8C9C100.3°0.0°
C8C7C12C110.1°0.0°
C8C7C12N6180.0°180.0°
C8C7C12S13179.6°180.0°
C8C7N6C5179.7°180.0°
C7C8C9H9179.7°180.0°
C9C10C11N14179.8°180.0°
C9C10C11C120.1°0.0°
C9C10N14C15135.2°144.9°
C10C9C8H8179.7°179.7°
C9C10C11H11179.9°179.9°
C9C10N14H1444.8°35.0°
C10C11C12H11180.0°179.9°
C10C11C12C70.2°0.0°
C10C11C12S13179.4°180.0°
C11C10N14C1544.5°35.1°
C11C10C9H9179.8°180.0°
C11C10N14H14135.5°144.9°
C11C12C7S13179.7°180.0°
C11C12C7N6179.9°180.0°
C12C11C10N14179.9°180.0°
C11C12S13C5180.0°180.0°
C12C7N6C50.3°0.0°
C7C12S13C50.3°0.1°
C12C7C8H8179.9°179.7°
C7C12C11H11179.8°179.9°
N6C7C12S130.4°0.0°
C7N6C5S130.1°0.0°
C7N6C5S4179.7°180.0°
N6C7C8H80.1°0.3°
C10N14C15C17178.6°175.3°
C10N14C15H14180.0°180.0°
C10N14C15O160.8°4.6°
N14C10C9H90.4°0.0°
N14C10C11H110.2°0.0°
C12S13C5N60.1°0.1°
C12S13C5S4179.9°180.0°
S13C12C11H110.5°0.0°
N6C5S13S4179.8°179.9°
N6C5S4C3165.7°0.0°
S13C5S4C314.1°180.0°
C5S4C3C2149.5°180.0°
C5S4C3H31C90.0°60.0°
C5S4C3H32C28.9°60.0°
C1C2C3H2180.0°179.9°
C1C2C3S4151.3°115.0°
C2C1H11CH12C180.0°180.0°
C1C2C3H31C88.2°125.0°
C1C2C3H32C30.7°5.0°
C2C3S4H31C120.6°120.0°
C2C3S4H32C120.5°120.0°
C3C2C1H11C0.0°180.0°
C3C2C1H12C180.0°0.0°
C2C3H31CH32C118.4°120.0°
C17C15N14O16179.4°180.0°
C15C17C18C19158.1°180.0°
C15C17C18H171120.5°120.0°
C15C17C18H172120.5°120.0°
C17C15N14H141.4°4.6°
C15C17H171H172118.5°119.9°
C15C17C18H18137.3°60.0°
C15C17C18H18281.1°60.0°
N14C15C17C18117.1°180.0°
N14C15C17H171122.4°60.0°
N14C15C17H1723.5°59.9°
O16C15C17C1863.5°0.0°
O16C15N14H14179.2°175.4°
O16C15C17H17157.0°120.0°
O16C15C17H172176.0°120.0°
C18C19O20O21179.7°179.9°
C19C18C17H181120.8°120.0°
C19C18C17H182120.8°120.0°
C19C18C17H17137.6°60.0°
C19C18C17H17281.4°60.0°
C19C18H181H182117.4°120.0°
C18C19O21H21179.8°180.0°
O20C19C18C17123.2°0.0°
O20C19C18H181116.0°120.1°
O20C19C18H1822.3°120.0°
O20C19O21H210.0°0.1°
O21C19C18C1757.1°180.0°
O21C19C18H18163.7°60.0°
O21C19C18H182177.9°59.9°
S4C3C2H228.7°65.1°
S4C3H31CH32C118.4°120.0°
C18C17H171H172118.5°120.1°
C17C18H181H182117.5°120.0°
H8C8C9H90.3°0.3°
H11CC1C2H2180.0°0.0°
H12CC1C2H20.0°179.9°
H2C2C3H31C91.8°55.0°
H2C2C3H32C149.3°175.0°
H171C17C18H18183.2°60.0°
H171C17C18H182158.4°180.0°
H172C17C18H181157.8°180.0°
H172C17C18H18239.4°60.0°

221716

PDB entries from 2024-06-26

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