VAB
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C8 | C9 | sing | 1.37Å | 1.39Å | Aromatic |
C8 | C7 | doub | 1.41Å | 1.40Å | Aromatic |
C9 | C10 | doub | 1.39Å | 1.40Å | Aromatic |
C11 | C10 | sing | 1.38Å | 1.40Å | Aromatic |
C11 | C12 | doub | 1.39Å | 1.38Å | Aromatic |
C7 | C12 | sing | 1.40Å | 1.40Å | Aromatic |
C7 | N6 | sing | 1.35Å | 1.40Å | Aromatic |
C10 | N14 | sing | 1.40Å | 1.42Å | |
C12 | S13 | sing | 1.76Å | 1.74Å | Aromatic |
C5 | N6 | doub | 1.29Å | 1.29Å | Aromatic |
C5 | S13 | sing | 1.76Å | 1.75Å | Aromatic |
C5 | S4 | sing | 1.76Å | 1.75Å | |
C1 | C2 | doub | 1.31Å | 1.27Å | |
C2 | C3 | sing | 1.51Å | 1.52Å | |
C15 | C17 | sing | 1.51Å | 1.50Å | |
C15 | N14 | sing | 1.35Å | 1.37Å | |
C15 | O16 | doub | 1.21Å | 1.24Å | |
C19 | C18 | sing | 1.51Å | 1.49Å | |
C19 | O20 | doub | 1.21Å | 1.22Å | |
C19 | O21 | sing | 1.34Å | 1.31Å | |
C3 | S4 | sing | 1.81Å | 1.83Å | |
C17 | C18 | sing | 1.53Å | 1.53Å | |
C8 | H8 | sing | 1.08Å | 1.08Å | |
C9 | H9 | sing | 1.08Å | 1.08Å | |
C11 | H11 | sing | 1.08Å | 1.08Å | |
N14 | H14 | sing | 0.97Å | 1.00Å | |
C1 | H11C | sing | 1.08Å | 1.08Å | |
C1 | H12C | sing | 1.08Å | 1.08Å | |
C2 | H2 | sing | 1.08Å | 1.08Å | |
C3 | H31C | sing | 1.09Å | 1.10Å | |
C3 | H32C | sing | 1.09Å | 1.10Å | |
C17 | H171 | sing | 1.09Å | 1.10Å | |
C17 | H172 | sing | 1.09Å | 1.10Å | |
C18 | H181 | sing | 1.09Å | 1.10Å | |
C18 | H182 | sing | 1.09Å | 1.10Å | |
O21 | H21 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C9 | C8 | C7 | 119.7° | 120.5° |
C8 | C9 | C10 | 120.8° | 120.6° |
C9 | C8 | H8 | 120.2° | 119.7° |
C8 | C9 | H9 | 119.6° | 119.7° |
C8 | C7 | C12 | 118.7° | 118.5° |
C8 | C7 | N6 | 126.3° | 128.6° |
C7 | C8 | H8 | 120.1° | 119.8° |
C9 | C10 | C11 | 119.9° | 119.8° |
C9 | C10 | N14 | 120.2° | 120.1° |
C10 | C9 | H9 | 119.6° | 119.7° |
C10 | C11 | C12 | 118.8° | 120.1° |
C11 | C10 | N14 | 119.9° | 120.1° |
C10 | C11 | H11 | 120.6° | 119.9° |
C11 | C12 | C7 | 122.1° | 120.4° |
C11 | C12 | S13 | 128.2° | 131.1° |
C12 | C11 | H11 | 120.6° | 119.9° |
C12 | C7 | N6 | 115.0° | 112.8° |
C7 | C12 | S13 | 109.6° | 108.4° |
C7 | N6 | C5 | 110.3° | 117.8° |
C10 | N14 | C15 | 127.2° | 120.0° |
C10 | N14 | H14 | 116.4° | 120.0° |
C12 | S13 | C5 | 88.4° | 90.4° |
N6 | C5 | S13 | 116.7° | 110.4° |
N6 | C5 | S4 | 122.3° | 124.8° |
S13 | C5 | S4 | 121.0° | 124.8° |
C5 | S4 | C3 | 104.4° | 100.0° |
C1 | C2 | C3 | 125.0° | 120.0° |
C2 | C1 | H11C | 120.0° | 120.0° |
C2 | C1 | H12C | 120.0° | 120.0° |
C1 | C2 | H2 | 117.4° | 120.0° |
C2 | C3 | S4 | 113.0° | 109.5° |
C3 | C2 | H2 | 117.5° | 120.0° |
C2 | C3 | H31C | 108.6° | 109.5° |
C2 | C3 | H32C | 108.6° | 109.5° |
C17 | C15 | N14 | 114.8° | 120.0° |
C17 | C15 | O16 | 122.2° | 120.0° |
C15 | C17 | C18 | 112.8° | 109.5° |
C15 | C17 | H171 | 108.6° | 109.4° |
C15 | C17 | H172 | 108.6° | 109.5° |
N14 | C15 | O16 | 123.0° | 120.0° |
C15 | N14 | H14 | 116.4° | 120.0° |
C18 | C19 | O20 | 118.4° | 120.0° |
C18 | C19 | O21 | 120.0° | 120.0° |
C19 | C18 | C17 | 115.1° | 109.5° |
C19 | C18 | H181 | 108.0° | 109.5° |
C19 | C18 | H182 | 108.0° | 109.5° |
O20 | C19 | O21 | 121.6° | 120.0° |
C19 | O21 | H21 | 109.5° | 116.9° |
S4 | C3 | H31C | 108.6° | 109.5° |
S4 | C3 | H32C | 108.6° | 109.5° |
C18 | C17 | H171 | 108.6° | 109.5° |
C18 | C17 | H172 | 108.6° | 109.5° |
C17 | C18 | H181 | 108.1° | 109.5° |
C17 | C18 | H182 | 108.1° | 109.5° |
H11C | C1 | H12C | 120.0° | 119.9° |
H31C | C3 | H32C | 109.4° | 109.5° |
H171 | C17 | H172 | 109.5° | 109.5° |
H181 | C18 | H182 | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C9 | C8 | C7 | H8 | 180.0° | 179.7° |
C8 | C9 | C10 | H9 | 180.0° | 180.0° |
C8 | C9 | C10 | C11 | 0.2° | 0.0° |
C9 | C8 | C7 | C12 | 0.1° | 0.0° |
C9 | C8 | C7 | N6 | 179.9° | 180.0° |
C8 | C9 | C10 | N14 | 179.6° | 180.0° |
C7 | C8 | C9 | C10 | 0.3° | 0.0° |
C8 | C7 | C12 | C11 | 0.1° | 0.0° |
C8 | C7 | C12 | N6 | 180.0° | 180.0° |
C8 | C7 | C12 | S13 | 179.6° | 180.0° |
C8 | C7 | N6 | C5 | 179.7° | 180.0° |
C7 | C8 | C9 | H9 | 179.7° | 180.0° |
C9 | C10 | C11 | N14 | 179.8° | 180.0° |
C9 | C10 | C11 | C12 | 0.1° | 0.0° |
C9 | C10 | N14 | C15 | 135.2° | 144.9° |
C10 | C9 | C8 | H8 | 179.7° | 179.7° |
C9 | C10 | C11 | H11 | 179.9° | 179.9° |
C9 | C10 | N14 | H14 | 44.8° | 35.0° |
C10 | C11 | C12 | H11 | 180.0° | 179.9° |
C10 | C11 | C12 | C7 | 0.2° | 0.0° |
C10 | C11 | C12 | S13 | 179.4° | 180.0° |
C11 | C10 | N14 | C15 | 44.5° | 35.1° |
C11 | C10 | C9 | H9 | 179.8° | 180.0° |
C11 | C10 | N14 | H14 | 135.5° | 144.9° |
C11 | C12 | C7 | S13 | 179.7° | 180.0° |
C11 | C12 | C7 | N6 | 179.9° | 180.0° |
C12 | C11 | C10 | N14 | 179.9° | 180.0° |
C11 | C12 | S13 | C5 | 180.0° | 180.0° |
C12 | C7 | N6 | C5 | 0.3° | 0.0° |
C7 | C12 | S13 | C5 | 0.3° | 0.1° |
C12 | C7 | C8 | H8 | 179.9° | 179.7° |
C7 | C12 | C11 | H11 | 179.8° | 179.9° |
N6 | C7 | C12 | S13 | 0.4° | 0.0° |
C7 | N6 | C5 | S13 | 0.1° | 0.0° |
C7 | N6 | C5 | S4 | 179.7° | 180.0° |
N6 | C7 | C8 | H8 | 0.1° | 0.3° |
C10 | N14 | C15 | C17 | 178.6° | 175.3° |
C10 | N14 | C15 | H14 | 180.0° | 180.0° |
C10 | N14 | C15 | O16 | 0.8° | 4.6° |
N14 | C10 | C9 | H9 | 0.4° | 0.0° |
N14 | C10 | C11 | H11 | 0.2° | 0.0° |
C12 | S13 | C5 | N6 | 0.1° | 0.1° |
C12 | S13 | C5 | S4 | 179.9° | 180.0° |
S13 | C12 | C11 | H11 | 0.5° | 0.0° |
N6 | C5 | S13 | S4 | 179.8° | 179.9° |
N6 | C5 | S4 | C3 | 165.7° | 0.0° |
S13 | C5 | S4 | C3 | 14.1° | 180.0° |
C5 | S4 | C3 | C2 | 149.5° | 180.0° |
C5 | S4 | C3 | H31C | 90.0° | 60.0° |
C5 | S4 | C3 | H32C | 28.9° | 60.0° |
C1 | C2 | C3 | H2 | 180.0° | 179.9° |
C1 | C2 | C3 | S4 | 151.3° | 115.0° |
C2 | C1 | H11C | H12C | 180.0° | 180.0° |
C1 | C2 | C3 | H31C | 88.2° | 125.0° |
C1 | C2 | C3 | H32C | 30.7° | 5.0° |
C2 | C3 | S4 | H31C | 120.6° | 120.0° |
C2 | C3 | S4 | H32C | 120.5° | 120.0° |
C3 | C2 | C1 | H11C | 0.0° | 180.0° |
C3 | C2 | C1 | H12C | 180.0° | 0.0° |
C2 | C3 | H31C | H32C | 118.4° | 120.0° |
C17 | C15 | N14 | O16 | 179.4° | 180.0° |
C15 | C17 | C18 | C19 | 158.1° | 180.0° |
C15 | C17 | C18 | H171 | 120.5° | 120.0° |
C15 | C17 | C18 | H172 | 120.5° | 120.0° |
C17 | C15 | N14 | H14 | 1.4° | 4.6° |
C15 | C17 | H171 | H172 | 118.5° | 119.9° |
C15 | C17 | C18 | H181 | 37.3° | 60.0° |
C15 | C17 | C18 | H182 | 81.1° | 60.0° |
N14 | C15 | C17 | C18 | 117.1° | 180.0° |
N14 | C15 | C17 | H171 | 122.4° | 60.0° |
N14 | C15 | C17 | H172 | 3.5° | 59.9° |
O16 | C15 | C17 | C18 | 63.5° | 0.0° |
O16 | C15 | N14 | H14 | 179.2° | 175.4° |
O16 | C15 | C17 | H171 | 57.0° | 120.0° |
O16 | C15 | C17 | H172 | 176.0° | 120.0° |
C18 | C19 | O20 | O21 | 179.7° | 179.9° |
C19 | C18 | C17 | H181 | 120.8° | 120.0° |
C19 | C18 | C17 | H182 | 120.8° | 120.0° |
C19 | C18 | C17 | H171 | 37.6° | 60.0° |
C19 | C18 | C17 | H172 | 81.4° | 60.0° |
C19 | C18 | H181 | H182 | 117.4° | 120.0° |
C18 | C19 | O21 | H21 | 179.8° | 180.0° |
O20 | C19 | C18 | C17 | 123.2° | 0.0° |
O20 | C19 | C18 | H181 | 116.0° | 120.1° |
O20 | C19 | C18 | H182 | 2.3° | 120.0° |
O20 | C19 | O21 | H21 | 0.0° | 0.1° |
O21 | C19 | C18 | C17 | 57.1° | 180.0° |
O21 | C19 | C18 | H181 | 63.7° | 60.0° |
O21 | C19 | C18 | H182 | 177.9° | 59.9° |
S4 | C3 | C2 | H2 | 28.7° | 65.1° |
S4 | C3 | H31C | H32C | 118.4° | 120.0° |
C18 | C17 | H171 | H172 | 118.5° | 120.1° |
C17 | C18 | H181 | H182 | 117.5° | 120.0° |
H8 | C8 | C9 | H9 | 0.3° | 0.3° |
H11C | C1 | C2 | H2 | 180.0° | 0.0° |
H12C | C1 | C2 | H2 | 0.0° | 179.9° |
H2 | C2 | C3 | H31C | 91.8° | 55.0° |
H2 | C2 | C3 | H32C | 149.3° | 175.0° |
H171 | C17 | C18 | H181 | 83.2° | 60.0° |
H171 | C17 | C18 | H182 | 158.4° | 180.0° |
H172 | C17 | C18 | H181 | 157.8° | 180.0° |
H172 | C17 | C18 | H182 | 39.4° | 60.0° |