Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

V6Q

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N10C8sing1.47Å1.47Å
C8C3sing1.51Å1.50Å
C3C2doub1.38Å1.39ÅAromatic
C3C4sing1.39Å1.40ÅAromatic
C2C1sing1.38Å1.38ÅAromatic
O7C4sing1.36Å1.37Å
O7C9sing1.43Å1.42Å
C4C5doub1.39Å1.39ÅAromatic
C1C6doub1.38Å1.38ÅAromatic
C5C6sing1.38Å1.38ÅAromatic
C1H1sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C5H3sing1.08Å1.08Å
C6H4sing1.08Å1.08Å
C8H5sing1.09Å1.10Å
C8H6sing1.09Å1.10Å
C9H7sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C9H9sing1.09Å1.10Å
N10H10sing1.01Å1.00Å
N10H11sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N10C8C3112.3°109.5°
N10C8H5108.8°109.5°
N10C8H6108.8°109.4°
C8N10H10109.5°111.0°
C8N10H11109.5°111.0°
C8C3C2121.4°120.0°
C8C3C4120.4°120.1°
C3C8H5108.8°109.5°
C3C8H6108.8°109.4°
C2C3C4118.2°119.9°
C3C2C1121.0°120.1°
C3C2H2119.5°120.0°
C3C4O7115.1°120.0°
C3C4C5120.8°119.9°
C2C1C6119.9°120.1°
C2C1H1120.1°120.0°
C1C2H2119.5°120.0°
C4O7C9117.4°117.0°
O7C4C5124.0°120.1°
O7C9H7109.5°109.5°
O7C9H8109.5°109.5°
O7C9H9109.5°109.5°
C4C5C6119.7°119.9°
C4C5H3120.2°120.0°
C1C6C5120.5°120.1°
C6C1H1120.1°119.9°
C1C6H4119.8°120.0°
C6C5H3120.2°120.0°
C5C6H4119.7°119.9°
H5C8H6109.5°109.5°
H7C9H8109.5°109.5°
H7C9H9109.5°109.5°
H8C9H9109.4°109.4°
H10N10H11109.4°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N10C8C3H5120.4°120.0°
N10C8C3H6120.4°119.9°
N10C8C3C293.5°100.1°
N10C8C3C486.2°80.0°
N10C8H5H6118.7°119.9°
C8N10H10H11120.0°124.0°
C8C3C2C4179.7°179.9°
C8C3C2C1179.9°180.0°
C8C3C4O70.1°0.1°
C8C3C4C5179.6°180.0°
C8C3C2H20.1°0.0°
C3C8H5H6118.7°120.0°
C3C8N10H10180.0°56.1°
C3C8N10H1160.0°179.9°
C3C2C1H2180.0°180.0°
C2C3C4O7179.8°180.0°
C2C3C4C50.2°0.1°
C3C2C1C60.3°0.0°
C3C2C1H1179.7°179.8°
C2C3C8H526.9°20.0°
C2C3C8H6146.1°140.0°
C4C3C2C10.2°0.1°
C3C4O7C5179.6°179.9°
C3C4O7C9179.6°180.0°
C3C4C5C60.3°0.1°
C4C3C2H2179.8°180.0°
C3C4C5H3179.7°180.0°
C4C3C8H5153.3°160.0°
C4C3C8H634.2°40.0°
C2C1C6H1180.0°179.8°
C2C1C6C50.2°0.0°
C2C1C6H4179.8°179.8°
O7C4C5C6179.9°179.9°
O7C4C5H30.1°0.1°
C4O7C9H7180.0°60.0°
C4O7C9H860.0°60.0°
C4O7C9H960.0°180.0°
C9O7C4C50.7°0.1°
O7C9H7H8120.0°120.0°
O7C9H7H9120.0°120.0°
O7C9H8H9120.0°120.0°
C4C5C6C10.1°0.0°
C4C5C6H3180.0°180.0°
C4C5C6H4179.9°179.7°
C1C6C5H4180.0°179.7°
C6C1C2H2179.6°180.0°
C1C6C5H3179.9°179.9°
C5C6C1H1179.8°179.8°
H1C1C2H20.4°0.2°
H1C1C6H40.2°0.0°
H3C5C6H40.1°0.2°
H5C8N10H1059.6°64.0°
H5C8N10H1160.4°60.0°
H6C8N10H1059.6°176.0°
H6C8N10H11179.6°60.0°
H7C9H8H9120.0°120.0°

220760

PDB entries from 2024-06-05

PDB statisticsPDBj update infoContact PDBjnumon