Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

V6P

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O06C04sing1.36Å1.41Å
C04C09doub1.39Å1.39ÅAromatic
C04C01sing1.39Å1.39ÅAromatic
C09C07sing1.38Å1.39ÅAromatic
C13C14doub1.38Å1.38ÅAromatic
C13C10sing1.38Å1.39ÅAromatic
C01C02doub1.39Å1.39ÅAromatic
C14C12sing1.38Å1.39ÅAromatic
C10C05doub1.39Å1.40ÅAromatic
C12C11doub1.38Å1.38ÅAromatic
C07C08doub1.38Å1.39ÅAromatic
C02C08sing1.39Å1.39ÅAromatic
C02O03sing1.36Å1.41Å
C05C11sing1.39Å1.39ÅAromatic
C05O03sing1.36Å1.41Å
C01H1sing1.08Å1.08Å
C07H2sing1.08Å1.08Å
C08H3sing1.08Å1.08Å
C09H4sing1.08Å1.08Å
C10H5sing1.08Å1.08Å
C11H6sing1.08Å1.08Å
C12H7sing1.08Å1.08Å
C13H8sing1.08Å1.08Å
C14H9sing1.08Å1.08Å
O06H10sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O06C04C09121.2°120.0°
O06C04C01119.0°120.1°
C04O06H10109.5°113.9°
C09C04C01119.8°119.9°
C04C09C07119.7°120.1°
C04C09H4120.1°120.0°
C04C01C02121.2°119.9°
C04C01H1119.4°120.0°
C09C07C08120.0°120.1°
C09C07H2120.0°120.0°
C07C09H4120.2°120.0°
C14C13C10119.3°120.1°
C13C14C12120.8°120.1°
C14C13H8120.3°120.0°
C13C14H9119.6°119.9°
C13C10C05120.6°119.9°
C13C10H5119.7°120.0°
C10C13H8120.4°119.9°
C01C02C08118.5°120.0°
C01C02O03120.9°120.0°
C02C01H1119.4°120.1°
C14C12C11119.6°120.0°
C14C12H7120.2°120.0°
C12C14H9119.6°120.0°
C10C05C11118.9°119.9°
C10C05O03121.2°120.0°
C05C10H5119.7°120.1°
C12C11C05120.8°119.9°
C12C11H6119.6°120.0°
C11C12H7120.2°120.0°
C07C08C02120.8°120.0°
C08C07H2120.0°119.9°
C07C08H3119.6°120.0°
C08C02O03120.7°120.0°
C02C08H3119.6°120.0°
C02O03C05114.0°118.0°
C11C05O03119.9°120.1°
C05C11H6119.6°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O06C04C09C01179.8°179.9°
O06C04C09C07179.6°179.5°
O06C04C01C02179.5°180.0°
O06C04C01H10.5°0.3°
O06C04C09H40.4°0.1°
C04C09C07H4180.0°179.5°
C09C04C01C020.8°0.1°
C04C09C07C080.6°0.8°
C09C04C01H1179.3°179.8°
C04C09C07H2179.4°179.8°
C09C04O06H10180.0°90.0°
C01C04C09C070.6°0.5°
C04C01C02H1180.0°179.7°
C04C01C02C080.9°0.4°
C04C01C02O03179.7°179.7°
C01C04C09H4179.4°180.0°
C01C04O06H100.2°90.0°
C09C07C08H2180.0°179.5°
C09C07C08C020.7°0.5°
C09C07C08H3179.2°179.5°
C14C13C10H8180.0°179.1°
C13C14C12H9180.0°179.2°
C14C13C10C051.3°0.5°
C13C14C12C110.6°0.5°
C14C13C10H5178.7°179.4°
C13C14C12H7179.4°179.4°
C10C13C14C120.9°0.8°
C13C10C05H5180.0°179.9°
C13C10C05C111.3°0.0°
C13C10C05O03179.3°179.7°
C10C13C14H9179.1°180.0°
C01C02C08C070.9°0.1°
C01C02C08O03179.4°179.9°
C01C02O03C0541.1°0.4°
C01C02C08H3179.1°180.0°
C14C12C11H7180.0°179.9°
C14C12C11C050.6°0.1°
C14C12C11H6179.4°180.0°
C12C14C13H8179.1°179.9°
C10C05C11C121.0°0.3°
C10C05O03C0288.5°90.1°
C10C05C11O03178.1°179.7°
C10C05C11H6179.0°179.7°
C05C10C13H8178.7°179.7°
C12C11C05H6180.0°180.0°
C12C11C05O03179.0°180.0°
C11C12C14H9179.4°179.7°
C07C08C02H3180.0°179.9°
C07C08C02O03179.7°180.0°
C08C07C09H4179.4°179.7°
C08C02O03C05139.5°179.7°
C08C02C01H1179.2°180.0°
C02C08C07H2179.2°180.0°
C02O03C05C1193.5°90.2°
O03C02C01H10.2°0.0°
O03C02C08H30.3°0.0°
C11C05C10H5178.7°180.0°
C05C11C12H7179.4°180.0°
O03C05C10H50.7°0.4°
O03C05C11H61.0°0.0°
H2C07C08H30.8°0.0°
H2C07C09H40.7°0.2°
H5C10C13H81.3°0.3°
H6C11C12H70.6°0.1°
H7C12C14H90.6°0.2°
H8C13C14H90.9°0.9°

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon