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V5S

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
COsing1.43Å1.17Å
C4C3doub1.38Å1.39ÅAromatic
C4C5sing1.38Å1.38ÅAromatic
C3C2sing1.39Å1.40ÅAromatic
BRC5sing1.89Å1.91Å
C2C7doub1.39Å1.40ÅAromatic
C5C6doub1.38Å1.38ÅAromatic
C7C6sing1.38Å1.39ÅAromatic
C2Nsing1.40Å1.48Å
CH10sing1.09Å1.10Å
CH11sing1.09Å1.10Å
OHsing0.97Å0.95Å
C4H7sing1.08Å1.08Å
C3H6sing1.08Å1.08Å
C6H8sing1.08Å1.08Å
C7H9sing1.08Å1.08Å
C1H13sing1.09Å1.10Å
C1H4sing1.09Å1.10Å
NH1sing0.97Å1.00Å
NC1sing1.47Å1.44Å
C1Csing1.53Å1.46Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OCH10111.0°109.4°
OCH11111.0°109.5°
COH109.5°114.0°
OCC1103.1°109.5°
C3C4C5119.6°120.1°
C4C3C2121.0°119.9°
C3C4H7120.2°120.0°
C4C3H6119.5°120.0°
C4C5BR119.3°119.9°
C4C5C6120.8°120.1°
C5C4H7120.2°119.9°
C3C2C7118.1°119.9°
C3C2N122.0°120.0°
C2C3H6119.5°120.1°
BRC5C6119.9°119.9°
C2C7C6120.9°119.9°
C7C2N119.9°120.1°
C2C7H9119.6°120.1°
C5C6C7119.4°120.1°
C5C6H8120.3°120.0°
C7C6H8120.3°120.0°
C6C7H9119.6°120.0°
C2NH1105.3°120.1°
C2NC1125.5°120.0°
H10CH11109.5°109.5°
H10CC1111.0°109.5°
H11CC1111.0°109.5°
H13C1H4109.5°109.4°
H13C1N117.9°109.4°
H13C1C117.8°109.5°
H4C1N117.9°109.5°
H4C1C117.8°109.5°
H1NC1105.3°119.9°
NC1C72.1°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OCH10H11122.9°120.0°
OCH10C1114.1°120.0°
OCH11C1114.1°120.0°
OCC1H1331.8°55.0°
OCC1H4166.6°175.0°
OCC1N80.8°65.0°
C3C4C5H7180.0°180.0°
C4C3C2H6180.0°179.9°
C3C4C5BR176.8°179.9°
C4C3C2C75.6°0.2°
C3C4C5C60.8°0.3°
C4C3C2N174.9°180.0°
C5C4C3C23.9°0.0°
C4C5BRC6177.5°179.7°
C4C5C6C73.5°0.3°
C5C4C3H6176.1°180.0°
C4C5C6H8176.4°179.8°
C3C2C7N179.6°179.7°
C3C2C7C62.7°0.2°
C2C3C4H7176.1°180.0°
C3C2C7H9177.2°179.7°
C3C2NH1107.7°0.0°
C3C2NC114.5°179.7°
BRC5C6C7174.0°179.9°
BRC5C4H73.2°0.0°
BRC5C6H86.1°0.0°
C2C7C6C51.7°0.1°
C2C7C6H9180.0°179.9°
C7C2C3H6174.5°179.7°
C2C7C6H8178.2°180.0°
C7C2NH172.8°179.8°
C7C2NC1165.1°0.6°
C5C6C7H8180.0°179.9°
C6C5C4H7179.3°179.7°
C5C6C7H9178.3°180.0°
C6C7C2N177.7°179.9°
NC2C3H65.1°0.0°
NC2C7H92.4°0.0°
C2NC1H13157.1°60.3°
C2NC1H422.3°59.6°
C2NH1C1134.4°179.6°
C2NC1C90.3°179.7°
H10CH11C1122.9°120.0°
H10COH61.0°60.0°
H10CC1H13150.8°175.0°
H10CC1H474.4°65.1°
H10CC1N38.2°55.0°
H11COH61.0°60.0°
H11CC1H1387.2°65.0°
H11CC1H447.6°54.9°
H11CC1N160.2°175.0°
HOCC1180.0°180.0°
H7C4C3H63.9°0.0°
H8C6C7H91.7°0.1°
H13C1H4N138.3°119.9°
H13C1H4C138.3°120.0°
H13C1NH180.7°120.1°
H13C1NC112.6°120.0°
H4C1NH1144.4°120.0°
H4C1NC112.6°120.1°
H1NC1C31.9°0.1°

225946

PDB entries from 2024-10-09

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