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V5Q

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C46C47sing1.53Å1.58Å
C46N08sing1.47Å1.40Å
C47C05sing1.51Å1.55Å
N08C07sing1.47Å1.37Å
N08C09sing1.47Å1.29Å
C07C06sing1.51Å1.51Å
C26O25sing1.43Å1.42Å
C05C06doub1.38Å1.32ÅAromatic
C05C04sing1.39Å1.46ÅAromatic
C06C48sing1.39Å1.46ÅAromatic
C16C15doub1.38Å1.39ÅAromatic
C16C11sing1.38Å1.39ÅAromatic
C09C10sing1.53Å1.54Å
C04C03doub1.38Å1.39ÅAromatic
C10C11sing1.51Å1.53Å
C15C14sing1.39Å1.39ÅAromatic
O25C24sing1.36Å1.43Å
C48C49doub1.38Å1.40ÅAromatic
C11C12doub1.38Å1.39ÅAromatic
O28C27sing1.36Å1.41Å
O28C29sing1.43Å1.40Å
C24C27doub1.39Å1.40ÅAromatic
C24C23sing1.38Å1.41ÅAromatic
C27C30sing1.39Å1.40ÅAromatic
C03C49sing1.39Å1.38ÅAromatic
C03O02sing1.36Å1.44Å
C23C22doub1.39Å1.40ÅAromatic
C49O50sing1.36Å1.43Å
N21N17sing1.41Å1.36ÅAromatic
N21C20doub1.32Å1.36ÅAromatic
O34C33doub1.21Å1.19Å
C30C31doub1.39Å1.41ÅAromatic
C14N17sing1.40Å1.48Å
C14C13doub1.39Å1.39ÅAromatic
C22C31sing1.40Å1.40ÅAromatic
C22C20sing1.48Å1.58Å
O02C01sing1.43Å1.42Å
C31N32sing1.40Å1.48Å
C12C13sing1.38Å1.39ÅAromatic
N17N18sing1.29Å1.34ÅAromatic
C33N32sing1.35Å1.46Å
C33C35sing1.51Å1.53Å
C20N19sing1.34Å1.36ÅAromatic
O50C51sing1.43Å1.41Å
C35O41sing1.43Å1.47Å
C35C36sing1.54Å1.50Å
O41C40sing1.35Å1.52Å
N18N19doub1.29Å1.37ÅAromatic
C36C37sing1.52Å1.43Å
C40C42doub1.39Å1.41ÅAromatic
C40C39sing1.40Å1.41ÅAromatic
C37C39sing1.47Å1.48Å
C37O38doub1.21Å1.19Å
C42C43sing1.38Å1.40ÅAromatic
C39C45doub1.40Å1.42ÅAromatic
C43C44doub1.39Å1.42ÅAromatic
C45C44sing1.38Å1.40ÅAromatic
C10H1sing1.09Å1.10Å
C10H2sing1.09Å1.10Å
C13H3sing1.08Å1.08Å
C15H4sing1.08Å1.08Å
C26H5sing1.09Å1.10Å
C26H6sing1.09Å1.10Å
C26H7sing1.09Å1.10Å
C01H8sing1.09Å1.10Å
C01H9sing1.09Å1.10Å
C01H10sing1.09Å1.10Å
C04H11sing1.08Å1.08Å
C07H12sing1.09Å1.10Å
C07H13sing1.09Å1.10Å
C09H14sing1.09Å1.10Å
C09H15sing1.09Å1.10Å
C12H16sing1.08Å1.08Å
C16H17sing1.08Å1.08Å
C23H18sing1.08Å1.08Å
C29H19sing1.09Å1.10Å
C29H20sing1.09Å1.10Å
C29H21sing1.09Å1.10Å
C30H22sing1.08Å1.08Å
C35H23sing1.09Å1.10Å
C36H24sing1.09Å1.10Å
C36H25sing1.09Å1.10Å
C42H26sing1.08Å1.08Å
C43H27sing1.08Å1.08Å
C44H28sing1.08Å1.08Å
C45H29sing1.08Å1.08Å
C46H30sing1.09Å1.10Å
C46H31sing1.09Å1.10Å
C47H32sing1.09Å1.10Å
C47H33sing1.09Å1.10Å
C48H34sing1.08Å1.08Å
C51H35sing1.09Å1.10Å
C51H36sing1.09Å1.10Å
C51H37sing1.09Å1.10Å
N32H39sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C47C46N08112.1°108.5°
C46C47C05112.5°110.0°
C47C46H30108.8°109.6°
C47C46H31108.8°109.6°
C46C47H32108.7°109.4°
C46C47H33108.7°109.4°
C46N08C07110.9°110.2°
C46N08C09112.1°111.0°
N08C46H30108.8°109.6°
N08C46H31108.8°109.7°
C47C05C06120.1°121.6°
C47C05C04119.8°118.4°
C05C47H32108.7°109.4°
C05C47H33108.7°109.4°
C07N08C09107.8°111.0°
N08C07C06111.1°110.5°
N08C07H12109.0°109.2°
N08C07H13109.0°109.2°
N08C09C10114.5°109.5°
N08C09H14108.2°109.4°
N08C09H15108.2°109.5°
C07C06C05119.6°121.8°
C07C06C48120.3°118.3°
C06C07H12109.0°109.3°
C06C07H13109.1°109.3°
C26O25C24113.3°117.0°
O25C26H5109.5°109.4°
O25C26H6109.5°109.4°
O25C26H7109.5°109.5°
C06C05C04120.1°120.0°
C05C06C48120.0°119.8°
C05C04C03120.0°120.4°
C05C04H11120.1°119.8°
C06C48C49119.8°120.4°
C06C48H34120.0°119.8°
C15C16C11119.7°120.1°
C16C15C14119.9°119.9°
C16C15H4120.0°120.1°
C15C16H17120.2°119.9°
C16C11C10120.0°119.9°
C16C11C12120.3°120.2°
C11C16H17120.1°120.0°
C09C10C11109.4°109.4°
C09C10H1109.5°109.5°
C09C10H2109.5°109.5°
C10C09H14108.2°109.5°
C10C09H15108.2°109.5°
C04C03C49120.2°119.6°
C04C03O02119.6°120.2°
C03C04H11120.0°119.8°
C10C11C12119.6°119.9°
C11C10H1109.5°109.5°
C11C10H2109.5°109.5°
C15C14N17119.9°120.1°
C15C14C13120.3°119.8°
C14C15H4120.0°120.0°
O25C24C27120.6°119.9°
O25C24C23119.3°119.9°
C48C49C03119.9°119.7°
C48C49O50120.0°120.1°
C49C48H34120.1°119.8°
C11C12C13119.9°120.0°
C11C12H16120.1°119.9°
C27O28C29113.5°117.0°
O28C27C24120.1°119.9°
O28C27C30119.9°119.9°
O28C29H19109.5°109.4°
O28C29H20109.5°109.5°
O28C29H21109.5°109.5°
C27C24C23120.0°120.2°
C24C27C30120.0°120.2°
C24C23C22120.0°119.9°
C24C23H18120.0°120.1°
C27C30C31120.0°120.0°
C27C30H22120.0°120.0°
C49C03O02120.2°120.2°
C03C49O50120.1°120.1°
C03O02C01113.6°117.0°
C23C22C31120.1°119.9°
C23C22C20119.1°120.1°
C22C23H18120.0°120.0°
C49O50C51114.2°117.0°
N17N21C20107.7°105.9°
N21N17C14125.6°126.4°
N21N17N18108.8°107.1°
N21C20C22125.9°126.3°
N21C20N19108.0°107.4°
O34C33N32120.5°120.0°
O34C33C35119.9°120.0°
C30C31C22119.8°119.9°
C30C31N32120.5°120.1°
C31C30H22120.0°120.0°
N17C14C13119.9°120.1°
C14N17N18125.6°126.5°
C14C13C12119.8°120.0°
C14C13H3120.1°120.0°
C31C22C20120.8°120.1°
C22C31N32119.7°120.1°
C22C20N19126.2°126.3°
O02C01H8109.5°109.4°
O02C01H9109.5°109.4°
O02C01H10109.5°109.5°
C31N32C33120.9°120.0°
C31N32H39119.5°120.0°
C12C13H3120.1°120.0°
C13C12H16120.0°120.0°
N17N18N19107.7°109.8°
N32C33C35119.6°120.0°
C33N32H39119.5°120.0°
C33C35O41119.6°109.4°
C33C35C36120.1°109.5°
C33C35H2393.0°109.5°
C20N19N18107.9°109.8°
O50C51H35109.5°109.5°
O50C51H36109.5°109.5°
O50C51H37109.5°109.5°
O41C35C36119.4°109.4°
C35O41C40112.8°118.7°
O41C35H2393.2°109.5°
C35C36C37118.3°107.1°
C36C35H2393.1°109.6°
C35C36H24107.2°109.9°
C35C36H25107.2°109.9°
O41C40C42119.9°120.0°
O41C40C39120.3°120.8°
C36C37C39119.0°116.5°
C36C37O38120.4°121.7°
C37C36H24107.2°109.9°
C37C36H25107.2°109.9°
C42C40C39119.8°119.2°
C40C42C43120.0°120.0°
C40C42H26120.0°120.0°
C40C39C37120.8°119.0°
C40C39C45120.3°120.3°
C39C37O38120.6°121.8°
C37C39C45118.9°120.7°
C42C43C44120.2°120.7°
C43C42H26120.0°119.9°
C42C43H27119.9°119.7°
C39C45C44119.7°119.6°
C39C45H29120.2°120.2°
C43C44C45120.0°120.2°
C44C43H27119.9°119.6°
C43C44H28120.0°119.9°
C45C44H28120.0°119.9°
C44C45H29120.1°120.2°
H1C10H2109.4°109.5°
H5C26H6109.5°109.5°
H5C26H7109.5°109.5°
H6C26H7109.5°109.5°
H8C01H9109.5°109.4°
H8C01H10109.5°109.5°
H9C01H10109.4°109.5°
H12C07H13109.5°109.3°
H14C09H15109.5°109.5°
H19C29H20109.4°109.5°
H19C29H21109.5°109.5°
H20C29H21109.5°109.5°
H24C36H25109.5°110.0°
H30C46H31109.5°109.8°
H32C47H33109.5°109.3°
H35C51H36109.5°109.5°
H35C51H37109.5°109.5°
H36C51H37109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C47C46N08H30120.4°119.7°
C47C46N08H31120.4°119.7°
C46C47C05H32120.4°120.1°
C46C47C05H33120.5°120.2°
C47C46N08C0759.7°71.2°
C47C46N08C0960.9°165.4°
C46C47C05C065.7°17.1°
C46C47C05C04174.4°163.1°
C47C46H30H31118.8°120.5°
C46C47H32H33118.6°119.8°
N08C46C47C0523.0°50.4°
C46N08C07C09123.1°123.4°
C46N08C07C0666.0°52.6°
C46N08C09C1040.2°170.0°
C46N08C07H12173.8°172.9°
C46N08C07H1354.3°67.6°
C46N08C09H14160.9°50.0°
C46N08C09H1580.6°70.0°
N08C46H30H31118.8°120.5°
N08C46C47H32143.5°170.6°
N08C46C47H3397.4°69.7°
C47C05C06C070.3°0.8°
C47C05C06C04179.9°179.7°
C47C05C06C48179.9°179.4°
C47C05C04C03179.9°179.4°
C47C05C04H110.1°0.5°
C05C47C46H30143.4°69.3°
C05C47C46H3197.4°170.2°
C05C47H32H33118.6°119.7°
N08C07C06H12120.2°120.2°
N08C07C06H13120.2°120.2°
N08C07C06C0535.0°17.9°
N08C07C06C48144.6°162.4°
C07N08C09C10162.5°67.0°
N08C07H12H13119.2°119.4°
C07N08C09H1476.8°173.0°
C07N08C09H1541.8°53.0°
C07N08C46H30179.9°48.5°
C07N08C46H3160.7°169.1°
C09N08C07C0657.2°176.1°
N08C09C10H14120.7°119.9°
N08C09C10H15120.8°120.0°
N08C09C10C11106.9°180.0°
N08C09C10H113.1°60.0°
N08C09C10H2133.1°60.1°
C09N08C07H1263.1°63.7°
C09N08C07H13177.4°55.8°
N08C09H14H15117.7°120.0°
C09N08C46H3059.5°74.9°
C09N08C46H31178.7°45.7°
C07C06C05C48179.6°179.7°
C07C06C05C04179.8°179.4°
C07C06C48C49179.8°179.5°
C06C07H12H13119.3°119.6°
C07C06C48H340.2°0.4°
C26O25C24C27120.8°180.0°
C26O25C24C2358.9°0.2°
O25C26H5H6120.0°119.9°
O25C26H5H7120.0°120.0°
O25C26H6H7120.0°120.0°
C06C05C04C030.0°0.3°
C05C06C48C490.2°0.2°
C06C05C04H11180.0°179.8°
C05C06C07H12155.2°138.1°
C05C06C07H1385.2°102.3°
C06C05C47H32114.7°137.3°
C06C05C47H33126.2°103.1°
C05C06C48H34179.8°179.9°
C04C05C06C480.2°0.3°
C05C04C03H11180.0°179.9°
C05C04C03C490.1°0.1°
C05C04C03O02179.9°179.7°
C04C05C47H3265.2°43.0°
C04C05C47H3353.9°76.7°
C06C48C49H34180.0°179.9°
C06C48C49C030.1°0.0°
C06C48C49O50179.8°179.7°
C48C06C07H1224.4°42.2°
C48C06C07H1395.2°77.4°
C15C16C11H17180.0°179.7°
C15C16C11C10179.5°179.8°
C16C15C14H4180.0°179.9°
C15C16C11C120.5°0.3°
C16C15C14N17179.8°180.0°
C16C15C14C130.1°0.1°
C16C11C10C09117.2°90.1°
C16C11C10C12179.1°179.9°
C11C16C15C140.2°0.3°
C16C11C12C130.4°0.0°
C16C11C10H12.8°149.9°
C16C11C10H2122.8°29.9°
C11C16C15H4179.8°179.7°
C16C11C12H16179.6°179.9°
C09C10C11H1120.0°120.0°
C09C10C11H2120.0°120.0°
C09C10C11C1261.9°90.0°
C09C10H1H2120.0°120.0°
C10C09H14H15117.7°120.0°
C04C03C49C480.1°0.0°
C04C03C49O02179.8°179.9°
C04C03C49O50180.0°179.6°
C04C03O02C0152.3°0.1°
C10C11C12C13179.5°179.9°
C11C10H1H2120.1°120.0°
C11C10C09H14132.4°60.0°
C11C10C09H1513.9°60.0°
C10C11C12H160.5°0.0°
C10C11C16H170.4°0.1°
C15C14N17N2110.2°179.5°
C15C14N17C13179.7°180.0°
C15C14C13C120.1°0.4°
C15C14N17N18169.5°0.0°
C15C14C13H3179.9°180.0°
C14C15C16H17179.8°180.0°
O25C24C27O280.3°0.2°
O25C24C27C23179.7°179.8°
O25C24C27C30179.9°180.0°
O25C24C23C22179.9°179.8°
C24O25C26H5180.0°180.0°
C24O25C26H660.0°60.1°
C24O25C26H760.0°60.0°
O25C24C23H180.1°0.3°
C48C49C03O50179.9°179.6°
C48C49C03O02179.9°179.9°
C48C49O50C51132.3°0.3°
C11C12C13C140.2°0.3°
C11C12C13H16180.0°180.0°
C12C11C10H1178.1°30.0°
C12C11C10H258.1°150.0°
C11C12C13H3179.9°179.9°
C12C11C16H17179.5°180.0°
O28C27C24C30179.8°179.7°
O28C27C24C23180.0°180.0°
O28C27C30C31179.9°179.8°
C27O28C29H19180.0°180.0°
C27O28C29H2060.0°60.1°
C27O28C29H2160.0°60.0°
O28C27C30H220.1°0.2°
C29O28C27C2497.5°180.0°
C29O28C27C3082.3°0.2°
O28C29H19H20120.0°119.9°
O28C29H19H21120.0°120.0°
O28C29H20H21120.0°120.0°
C27C24C23C220.1°0.0°
C24C27C30C310.1°0.5°
C27C24C23H18179.9°179.9°
C24C27C30H22179.9°180.0°
C23C24C27C300.2°0.2°
C24C23C22H18180.0°180.0°
C24C23C22C310.1°0.1°
C24C23C22C20179.7°179.7°
C27C30C31H22180.0°179.5°
C27C30C31C220.2°0.5°
C27C30C31N32179.8°179.4°
C49C03O02C01127.5°180.0°
C03C49O50C5147.7°179.9°
C49C03C04H11179.9°180.0°
C03C49C48H34179.9°180.0°
O02C03C49O500.2°0.2°
C03O02C01H8180.0°60.1°
C03O02C01H960.0°180.0°
C03O02C01H1060.0°59.9°
O02C03C04H110.1°0.2°
C23C22C20N2141.0°5.0°
C23C22C31C300.2°0.2°
C23C22C31C20179.6°179.8°
C23C22C31N32179.9°179.7°
C23C22C20N19138.4°175.3°
O50C49C48H340.2°0.4°
C49O50C51H35180.0°60.0°
C49O50C51H3660.0°180.0°
C49O50C51H3760.0°60.0°
N21N17C14N18179.7°179.5°
N21N17C14C13170.0°0.5°
N17N21C20C22179.6°179.7°
N17N21C20N190.1°0.0°
N21N17N18N190.1°0.4°
C20N21N17C14179.7°179.8°
N21C20C22C31139.4°174.8°
N21C20C22N19179.4°179.6°
C20N21N17N180.0°0.2°
N21C20N19N180.2°0.3°
O34C33N32C310.2°5.4°
O34C33N32C35179.7°180.0°
O34C33C35O41140.6°5.0°
O34C33C35C3650.1°114.8°
O34C33C35H2345.2°125.0°
O34C33N32H39179.8°174.7°
C30C31C22N32179.6°179.9°
C30C31C22C20179.9°180.0°
C30C31N32C3324.3°34.6°
C30C31N32H39155.7°145.3°
N17C14C13C12179.8°179.7°
C14N17N18N19179.9°180.0°
N17C14C13H30.2°0.1°
N17C14C15H40.2°0.0°
C14C13C12H3180.0°179.6°
C13C14N17N1810.3°180.0°
C13C14C15H4179.9°180.0°
C14C13C12H16179.9°179.7°
C22C31N32C33155.3°145.3°
C31C22C20N1941.2°4.9°
C31C22C23H18179.9°179.9°
C22C31C30H22179.9°180.0°
C22C31N32H3924.7°34.8°
C20C22C31N320.5°0.1°
C22C20N19N18179.7°180.0°
C20C22C23H180.3°0.3°
O02C01H8H9120.0°119.9°
O02C01H8H10120.0°120.1°
O02C01H9H10120.0°120.1°
C31N32C33H39180.0°179.9°
C31N32C33C35179.6°174.6°
N32C31C30H220.2°0.1°
N17N18N19C200.2°0.4°
N32C33C35O4139.1°175.0°
N32C33C35C36130.1°65.1°
N32C33C35H23134.5°55.0°
C33C35O41C36169.3°119.9°
C33C35O41H2395.3°120.0°
C33C35C36H2395.3°120.1°
C33C35O41C40134.7°172.6°
C33C35C36C37149.4°178.7°
C33C35C36H2489.4°61.9°
C33C35C36H2528.1°59.3°
C35C33N32H390.5°5.4°
O50C51H35H36120.0°120.0°
O50C51H35H37120.0°120.0°
O50C51H36H37120.0°120.0°
O41C35C36H2395.4°120.0°
O41C35C36C3719.9°58.8°
C35O41C40C42154.9°157.8°
C35O41C40C3924.9°22.5°
O41C35C36H24101.3°178.2°
O41C35C36H25141.2°60.6°
C36C35O41C4034.7°52.7°
C35C36C37H24121.2°119.4°
C35C36C37H25121.3°119.4°
C35C36C37C396.8°40.1°
C35C36C37O38173.2°139.9°
C35C36H24H25116.0°121.1°
O41C40C42C39179.8°179.7°
O41C40C39C370.1°0.8°
O41C40C42C43179.9°179.4°
O41C40C39C45179.9°179.3°
C40O41C35H23130.0°67.4°
O41C40C42H260.1°0.5°
C36C37C39C4016.8°12.1°
C36C37C39O38180.0°180.0°
C36C37C39C45163.2°167.9°
C37C36C35H23115.3°61.3°
C37C36H24H25116.0°121.2°
C42C40C39C37179.9°179.5°
C40C42C43H26180.0°179.9°
C42C40C39C450.1°0.4°
C40C42C43C440.1°0.1°
C40C42C43H27179.9°179.9°
C40C39C37C45180.0°179.9°
C40C39C37O38163.2°167.8°
C39C40C42C430.2°0.3°
C40C39C45C440.0°0.2°
C39C40C42H26179.8°179.8°
C40C39C45H29180.0°179.8°
C37C39C45C44180.0°179.7°
C39C37C36H24128.0°159.5°
C39C37C36H25114.5°79.3°
C37C39C45H290.0°0.3°
O38C37C39C4516.8°12.1°
O38C37C36H2452.0°20.5°
O38C37C36H2565.5°100.8°
C42C43C44H27180.0°180.0°
C42C43C44C450.0°0.1°
C42C43C44H28180.0°179.9°
C39C45C44C430.0°0.0°
C39C45C44H29180.0°180.0°
C39C45C44H28180.0°179.9°
C43C44C45H28180.0°180.0°
C44C43C42H26179.9°180.0°
C43C44C45H29180.0°180.0°
C45C44C43H27180.0°179.9°
H1C10C09H14107.6°60.0°
H1C10C09H15133.9°180.0°
H2C10C09H1412.4°180.0°
H2C10C09H15106.1°60.0°
H3C13C12H160.1°0.1°
H4C15C16H170.2°0.0°
H5C26H6H7120.0°120.0°
H8C01H9H10120.0°120.0°
H19C29H20H21120.0°120.1°
H23C35C36H245.9°58.2°
H23C35C36H25123.4°179.4°
H26C42C43H270.1°0.0°
H27C43C44H280.0°0.1°
H28C44C45H290.0°0.1°
H30C46C47H3296.1°50.8°
H30C46C47H3323.0°170.6°
H31C46C47H3223.1°69.7°
H31C46C47H33142.2°50.0°
H35C51H36H37120.0°120.0°

248335

PDB entries from 2026-01-28

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