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V5C

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N2C10trip1.14Å1.15Å
C10C9sing1.47Å1.45Å
C9C8sing1.53Å1.55Å
C7N1sing1.47Å1.46Å
C8N1sing1.47Å1.47Å
N1C6sing1.35Å1.40Å
C6Odoub1.22Å1.22Å
C6C5sing1.42Å1.48Å
C5C4doub1.35Å1.33Å
C4C2sing1.47Å1.45Å
C2C3doub1.37Å1.37ÅAromatic
C2Nsing1.34Å1.41ÅAromatic
C3Ssing1.71Å1.70ÅAromatic
NC1doub1.29Å1.31ÅAromatic
SC1sing1.71Å1.75ÅAromatic
C1Csing1.51Å1.47Å
C7H1sing1.09Å1.10Å
C7H2sing1.09Å1.10Å
C7H3sing1.09Å1.10Å
C8H4sing1.09Å1.10Å
C8H5sing1.09Å1.10Å
C9H6sing1.09Å1.10Å
C9H7sing1.09Å1.10Å
C5H8sing1.08Å1.08Å
C4H9sing1.08Å1.08Å
C3H10sing1.08Å1.08Å
CH11sing1.09Å1.10Å
CH12sing1.09Å1.10Å
CH13sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N2C10C9179.2°180.0°
C10C9C8110.4°109.5°
C10C9H6109.2°109.5°
C10C9H7109.2°109.5°
C9C8N1108.8°109.5°
C9C8H4109.6°109.5°
C9C8H5109.6°109.5°
C8C9H6109.2°109.5°
C8C9H7109.3°109.4°
C7N1C8117.0°120.0°
C7N1C6120.8°120.0°
N1C7H1109.5°109.5°
N1C7H2109.5°109.5°
N1C7H3109.4°109.5°
C8N1C6122.2°120.0°
N1C8H4109.6°109.5°
N1C8H5109.6°109.4°
N1C6O119.3°120.0°
N1C6C5118.0°120.0°
OC6C5122.7°120.0°
C6C5C4119.2°120.0°
C6C5H8120.4°120.0°
C5C4C2123.8°120.0°
C4C5H8120.4°120.0°
C5C4H9118.1°120.0°
C4C2C3125.9°123.3°
C4C2N119.3°123.3°
C2C4H9118.1°120.0°
C3C2N114.6°113.4°
C2C3S111.5°108.7°
C2C3H10124.3°125.7°
C2NC1109.5°115.9°
C3SC189.0°91.2°
SC3H10124.2°125.6°
NC1S115.4°110.8°
NC1C123.6°124.6°
SC1C121.0°124.6°
C1CH11109.5°109.4°
C1CH12109.5°109.4°
C1CH13109.5°109.4°
H1C7H2109.5°109.5°
H1C7H3109.4°109.5°
H2C7H3109.5°109.4°
H4C8H5109.5°109.5°
H6C9H7109.5°109.4°
H11CH12109.5°109.5°
H11CH13109.4°109.5°
H12CH13109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N2C10C9C8161.9°172.7°
N2C10C9H678.0°52.6°
N2C10C9H741.7°67.3°
C10C9C8H6120.1°120.0°
C10C9C8H7120.1°120.0°
C10C9C8N1158.5°180.0°
C10C9C8H438.6°60.0°
C10C9C8H581.6°60.1°
C10C9H6H7119.6°120.0°
C9C8N1C738.8°90.3°
C9C8N1H4119.9°120.1°
C9C8N1H5119.9°120.0°
C9C8N1C6140.6°90.0°
C9C8H4H5120.3°120.0°
C8C9H6H7119.6°120.0°
C7N1C8C6179.4°179.7°
C7N1C6O0.6°180.0°
C7N1C6C5179.8°0.0°
N1C7H1H2120.0°120.0°
N1C7H1H3120.0°120.0°
N1C7H2H3120.0°120.0°
C7N1C8H481.1°29.8°
C7N1C8H5158.7°149.7°
C8N1C6O178.8°0.3°
C8N1C6C50.8°179.8°
C8N1C7H1180.0°89.7°
C8N1C7H260.0°30.3°
C8N1C7H360.0°150.2°
N1C8H4H5120.3°119.9°
N1C8C9H681.4°60.0°
N1C8C9H738.4°60.0°
N1C6OC5179.6°179.9°
N1C6C5C496.1°180.0°
C6N1C7H10.6°90.0°
C6N1C7H2119.4°150.0°
C6N1C7H3120.6°30.1°
C6N1C8H499.5°150.0°
C6N1C8H520.7°30.0°
N1C6C5H883.9°0.0°
OC6C5C484.3°0.1°
OC6C5H895.6°180.0°
C6C5C4H8180.0°180.0°
C6C5C4C2179.8°180.0°
C6C5C4H90.1°0.0°
C5C4C2H9180.0°180.0°
C5C4C2C32.1°180.0°
C5C4C2N172.7°0.1°
C4C2C3N175.0°179.9°
C4C2C3S174.1°180.0°
C4C2NC1174.2°179.8°
C2C4C5H80.2°0.0°
C4C2C3H105.9°0.2°
C2C3SH10180.0°179.8°
C3C2NC11.2°0.1°
C2C3SC10.4°0.2°
C3C2C4H9177.9°0.0°
NC2C3S0.9°0.1°
C2NC1S0.9°0.3°
C2NC1C177.8°180.0°
NC2C4H97.3°179.9°
NC2C3H10179.1°179.9°
C3SC1N0.3°0.3°
C3SC1C178.4°180.0°
NC1SC178.7°179.7°
NC1CH110.0°90.0°
NC1CH12120.0°149.9°
NC1CH13120.0°30.0°
C1SC3H10179.6°180.0°
SC1CH11178.6°90.3°
SC1CH1258.5°29.7°
SC1CH1361.4°149.7°
C1CH11H12120.0°120.0°
C1CH11H13120.0°119.9°
C1CH12H13120.0°119.9°
H1C7H2H3120.0°120.0°
H4C8C9H6158.7°NaN°
H4C8C9H781.5°60.0°
H5C8C9H638.5°60.0°
H5C8C9H7158.3°180.0°
H8C5C4H9179.9°180.0°
H11CH12H13120.0°120.1°

224931

PDB entries from 2024-09-11

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