Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

V4Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N01C02sing1.39Å1.39Å
C03C04doub1.38Å1.35ÅAromatic
C03C02sing1.39Å1.37ÅAromatic
C04C05sing1.39Å1.41ÅAromatic
C02N31doub1.32Å1.37ÅAromatic
C05C06doub1.38Å1.36ÅAromatic
N31C06sing1.32Å1.34ÅAromatic
C14C15doub1.38Å1.37ÅAromatic
C14C13sing1.38Å1.42ÅAromatic
C20C21doub1.36Å1.40ÅAromatic
C20C19sing1.39Å1.40ÅAromatic
C15C16sing1.39Å1.43ÅAromatic
C06C07sing1.51Å1.53Å
C18C19sing1.51Å1.56Å
C18O17sing1.43Å1.44Å
C21C22sing1.40Å1.45ÅAromatic
C19C29doub1.36Å1.41ÅAromatic
C13C12doub1.38Å1.41ÅAromatic
C08C07sing1.53Å1.57Å
C08C09sing1.53Å1.48Å
C16O17sing1.36Å1.45Å
C16C30doub1.39Å1.42ÅAromatic
C22C23doub1.41Å1.44ÅAromatic
C22C28sing1.42Å1.37ÅAromatic
C12C30sing1.38Å1.38ÅAromatic
C12C11sing1.51Å1.50Å
C29C28sing1.41Å1.43ÅAromatic
C23C24sing1.36Å1.40ÅAromatic
C09N10sing1.47Å1.42Å
N10C11sing1.47Å1.44Å
C28N27doub1.34Å1.41ÅAromatic
C24C25doub1.40Å1.41ÅAromatic
N27C25sing1.32Å1.36ÅAromatic
C25N26sing1.39Å1.44Å
C03H1sing1.08Å1.08Å
C04H2sing1.08Å1.08Å
C05H3sing1.08Å1.08Å
C07H4sing1.09Å1.10Å
C07H5sing1.09Å1.10Å
C08H6sing1.09Å1.10Å
C08H7sing1.09Å1.10Å
C09H8sing1.09Å1.10Å
C09H9sing1.09Å1.10Å
C11H10sing1.09Å1.10Å
C11H11sing1.09Å1.10Å
C13H12sing1.08Å1.08Å
C14H13sing1.08Å1.08Å
C15H14sing1.08Å1.08Å
C18H15sing1.09Å1.10Å
C18H16sing1.09Å1.10Å
C20H17sing1.08Å1.08Å
C21H18sing1.08Å1.08Å
C23H19sing1.08Å1.08Å
C24H20sing1.08Å1.08Å
C29H21sing1.08Å1.08Å
C30H22sing1.08Å1.08Å
N01H23sing0.97Å1.00Å
N01H24sing0.97Å1.00Å
N10H25sing1.01Å1.00Å
N26H27sing0.97Å1.00Å
N26H28sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N01C02C03114.3°119.7°
N01C02N31125.0°119.7°
C02N01H23109.5°120.0°
C02N01H24109.5°120.0°
C04C03C02118.8°119.1°
C03C04C05120.0°118.5°
C04C03H1120.6°120.4°
C03C04H2120.0°120.8°
C03C02N31120.7°120.5°
C02C03H1120.6°120.4°
C04C05C06120.3°119.3°
C05C04H2120.0°120.8°
C04C05H3119.9°120.3°
C02N31C06121.2°121.7°
C05C06N31118.9°120.8°
C05C06C07114.0°119.6°
C06C05H3119.8°120.3°
N31C06C07127.1°119.6°
C15C14C13119.9°120.0°
C14C15C16120.1°120.0°
C15C14H13120.0°120.0°
C14C15H14119.9°120.0°
C14C13C12120.3°120.1°
C14C13H12119.9°120.0°
C13C14H13120.0°120.0°
C21C20C19121.1°120.9°
C20C21C22118.1°119.6°
C21C20H17119.5°119.5°
C20C21H18121.0°120.2°
C20C19C18120.1°119.5°
C20C19C29120.4°121.0°
C19C20H17119.5°119.6°
C15C16O17123.1°120.0°
C15C16C30119.4°119.9°
C16C15H14120.0°120.0°
C06C07C08118.9°109.5°
C06C07H4107.1°109.4°
C06C07H5107.1°109.4°
C19C18O17107.0°109.5°
C18C19C29119.5°119.6°
C19C18H15110.1°109.5°
C19C18H16110.1°109.4°
C18O17C16115.5°117.0°
O17C18H15110.1°109.5°
O17C18H16110.1°109.5°
C21C22C23118.4°121.2°
C21C22C28120.9°119.7°
C22C21H18120.9°120.2°
C19C29C28118.7°119.8°
C19C29H21120.6°120.1°
C13C12C30119.7°120.1°
C13C12C11121.5°120.0°
C12C13H12119.9°119.9°
C07C08C09113.2°109.5°
C08C07H4107.1°109.5°
C08C07H5107.0°109.5°
C07C08H6108.6°109.5°
C07C08H7108.5°109.5°
C08C09N10109.7°109.5°
C09C08H6108.5°109.5°
C09C08H7108.5°109.5°
C08C09H8109.4°109.4°
C08C09H9109.4°109.5°
O17C16C30117.5°120.0°
C16C30C12120.6°119.9°
C16C30H22119.7°120.1°
C23C22C28120.7°119.1°
C22C23C24119.1°118.3°
C22C23H19120.5°120.8°
C22C28C29120.8°119.1°
C22C28N27118.8°119.9°
C30C12C11118.8°119.9°
C12C30H22119.7°120.0°
C12C11N10106.9°109.5°
C12C11H10110.1°109.4°
C12C11H11110.1°109.4°
C29C28N27120.4°121.0°
C28C29H21120.6°120.1°
C23C24C25119.1°119.9°
C24C23H19120.4°120.9°
C23C24H20120.4°120.0°
C09N10C11113.5°111.0°
N10C09H8109.4°109.5°
N10C09H9109.4°109.5°
C09N10H25108.4°111.0°
N10C11H10110.1°109.5°
N10C11H11110.1°109.5°
C11N10H25108.5°111.0°
C28N27C25121.4°121.3°
C24C25N27120.8°121.5°
C24C25N26119.5°119.3°
C25C24H20120.5°120.0°
N27C25N26119.7°119.3°
C25N26H27109.5°120.0°
C25N26H28109.5°120.0°
H4C07H5109.5°109.5°
H6C08H7109.5°109.4°
H8C09H9109.5°109.5°
H10C11H11109.4°109.5°
H15C18H16109.5°109.5°
H23N01H24109.5°120.0°
H27N26H28109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N01C02C03C04179.8°179.7°
N01C02C03N31179.8°179.8°
N01C02N31C06179.5°179.7°
N01C02C03H10.2°0.2°
C02N01H23H24120.0°179.9°
C04C03C02H1180.0°180.0°
C03C04C05H2180.0°180.0°
C04C03C02N310.0°0.1°
C03C04C05C060.4°0.0°
C03C04C05H3179.6°180.0°
C02C03C04C050.1°0.0°
C03C02N31C060.7°0.1°
C02C03C04H2179.9°180.0°
C03C02N01H23179.8°179.8°
C03C02N01H2460.2°0.3°
C04C05C06H3180.0°179.9°
C04C05C06N311.0°0.1°
C04C05C06C07178.8°179.9°
C05C04C03H1179.9°180.0°
C02N31C06C051.2°0.1°
C02N31C06C07178.7°180.0°
N31C02C03H1180.0°180.0°
N31C02N01H230.0°0.0°
N31C02N01H24120.0°179.9°
C05C06N31C07179.9°179.9°
C05C06C07C08150.9°124.9°
C06C05C04H2179.6°179.9°
C05C06C07H429.5°115.0°
C05C06C07H587.8°4.9°
N31C06C07C0829.3°54.9°
N31C06C05H3179.0°180.0°
N31C06C07H4150.6°65.1°
N31C06C07H592.1°174.9°
C15C14C13H13180.0°179.9°
C14C15C16H14180.0°180.0°
C15C14C13C120.1°0.0°
C14C15C16O17179.9°180.0°
C14C15C16C301.2°0.0°
C15C14C13H12179.9°180.0°
C13C14C15C160.8°0.0°
C14C13C12H12180.0°179.9°
C14C13C12C300.1°0.0°
C14C13C12C11178.9°179.7°
C13C14C15H14179.2°180.0°
C21C20C19H17180.0°180.0°
C21C20C19C18179.2°180.0°
C20C21C22H18180.0°180.0°
C21C20C19C290.8°0.3°
C20C21C22C23179.5°180.0°
C20C21C22C281.6°0.0°
C20C19C18C29178.4°179.8°
C20C19C18O17139.0°89.8°
C19C20C21C220.1°0.0°
C20C19C29C280.0°0.5°
C20C19C18H15101.3°30.3°
C20C19C18H1619.4°150.3°
C19C20C21H18180.0°180.0°
C20C19C29H21180.0°179.8°
C15C16O17C1853.5°0.0°
C15C16O17C30178.7°180.0°
C15C16C30C121.0°0.1°
C16C15C14H13179.2°179.9°
C15C16C30H22179.0°179.7°
C06C07C08H4121.3°120.0°
C06C07C08H5121.3°120.0°
C06C07C08C09144.7°180.0°
C07C06C05H31.1°0.1°
C06C07H4H5115.8°119.9°
C06C07C08H624.1°60.0°
C06C07C08H794.8°60.0°
C19C18O17H15119.6°120.0°
C19C18O17H16119.6°119.9°
C19C18O17C16173.9°180.0°
C18C19C29C28178.4°179.8°
C19C18H15H16121.1°120.0°
C18C19C20H170.8°0.0°
C18C19C29H211.6°0.0°
O17C18C19C2942.5°90.0°
C18O17C16C30127.9°180.0°
O17C18H15H16121.1°120.0°
C21C22C23C28178.9°180.0°
C21C22C28C292.5°0.2°
C21C22C23C24179.0°180.0°
C21C22C28N27179.2°180.0°
C22C21C20H17180.0°180.0°
C21C22C23H191.0°0.0°
C19C29C28C221.7°0.4°
C19C29C28H21180.0°179.8°
C19C29C28N27179.9°179.8°
C29C19C18H1577.1°150.0°
C29C19C18H16162.2°30.0°
C29C19C20H17179.2°179.8°
C13C12C30C160.4°0.0°
C13C12C30C11178.9°179.7°
C13C12C11N1064.0°89.7°
C13C12C11H1055.6°30.3°
C13C12C11H11176.4°150.3°
C12C13C14H13179.9°180.0°
C13C12C30H22179.6°179.7°
C07C08C09H6120.6°120.1°
C07C08C09H7120.5°120.0°
C07C08C09N10134.8°180.0°
C08C07H4H5115.7°120.0°
C07C08H6H7118.3°120.0°
C07C08C09H8105.2°60.0°
C07C08C09H914.7°60.0°
C08C09N10H8120.1°119.9°
C08C09N10H9120.0°120.0°
C08C09N10C11142.5°180.0°
C09C08C07H494.0°60.0°
C09C08C07H523.4°60.0°
C09C08H6H7118.3°120.0°
C08C09H8H9119.9°120.0°
C08C09N10H2596.9°56.0°
O17C16C30C12179.7°180.0°
O17C16C15H140.1°0.0°
C16O17C18H1554.3°60.0°
C16O17C18H1666.5°60.0°
O17C16C30H220.3°0.3°
C16C30C12H22180.0°179.7°
C16C30C12C11178.5°179.7°
C30C16C15H14178.8°180.0°
C23C22C28C29178.7°179.8°
C22C23C24H19180.0°180.0°
C23C22C28N270.4°0.0°
C22C23C24C250.4°0.0°
C23C22C21H180.5°0.0°
C22C23C24H20179.6°180.0°
C22C28C29N27178.3°179.8°
C28C22C23C240.1°0.0°
C22C28N27C250.9°0.0°
C28C22C21H18178.4°180.0°
C28C22C23H19179.9°180.0°
C22C28C29H21178.3°179.8°
C30C12C11N10114.9°90.0°
C30C12C11H10125.5°150.0°
C30C12C11H114.8°30.0°
C30C12C13H12179.9°180.0°
C12C11N10C0973.6°180.0°
C12C11N10H10119.6°120.0°
C12C11N10H11119.6°120.0°
C12C11H10H11121.2°120.0°
C11C12C13H121.1°0.3°
C11C12C30H221.5°0.0°
C12C11N10H25165.8°56.0°
C29C28N27C25179.2°179.7°
C23C24C25H20180.0°180.0°
C23C24C25N270.9°0.0°
C23C24C25N26178.7°180.0°
C09N10C11H25120.6°124.0°
N10C09C08H614.2°60.0°
N10C09C08H7104.7°60.0°
N10C09H8H9119.9°120.1°
C09N10C11H10166.8°60.0°
C09N10C11H1146.1°60.0°
C11N10C09H822.5°60.1°
C11N10C09H997.4°60.0°
N10C11H10H11121.2°120.0°
C28N27C25C241.2°0.0°
C28N27C25N26178.4°180.0°
N27C28C29H210.1°0.0°
C24C25N27N26179.6°179.9°
C25C24C23H19179.6°180.0°
C24C25N26H27179.6°0.1°
C24C25N26H2860.4°180.0°
N27C25C24H20179.1°180.0°
N27C25N26H270.0°180.0°
N27C25N26H28120.0°0.1°
N26C25C24H201.3°0.0°
C25N26H27H28120.0°179.9°
H1C03C04H20.1°0.0°
H2C04C05H30.4°0.0°
H4C07C08H6145.5°180.0°
H4C07C08H726.6°60.0°
H5C07C08H697.2°60.0°
H5C07C08H7143.9°180.0°
H6C08C09H8134.3°179.9°
H6C08C09H9105.8°60.0°
H7C08C09H815.4°60.0°
H7C08C09H9135.3°180.0°
H8C09N10H25143.1°176.0°
H9C09N10H2523.2°64.0°
H10C11N10H2546.2°64.0°
H11C11N10H2574.5°176.0°
H12C13C14H130.1°0.1°
H13C14C15H140.8°0.1°
H17C20C21H180.0°0.0°
H19C23C24H200.3°0.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon