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SummaryGeometryRelated PDB entries

V3N

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C01C02sing1.47Å1.53Å
C02C17doub1.40Å1.39ÅAromatic
C02C03sing1.40Å1.38ÅAromatic
C17C16sing1.38Å1.38ÅAromatic
C03C04doub1.38Å1.38ÅAromatic
C16C05doub1.40Å1.38ÅAromatic
C04C05sing1.40Å1.39ÅAromatic
C05C06sing1.48Å1.51Å
C10C11sing1.53Å1.53Å
C10C09sing1.53Å1.47Å
C11O12sing1.43Å1.47Å
C06N07sing1.35Å1.44Å
C06O15doub1.21Å1.18Å
N07C08sing1.46Å1.44Å
C09C08sing1.53Å1.52Å
C09C14sing1.53Å1.46Å
O12C13sing1.43Å1.47Å
C14C13sing1.53Å1.52Å
C01H1sing1.08Å1.08Å
C03H4sing1.08Å1.08Å
C04H5sing1.08Å1.08Å
C08H6sing1.09Å1.10Å
C08H7sing1.09Å1.10Å
C09H8sing1.09Å1.10Å
C10H9sing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C11H11sing1.09Å1.10Å
C11H12sing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H14sing1.09Å1.10Å
C14H15sing1.09Å1.10Å
C14H16sing1.09Å1.10Å
C16H17sing1.08Å1.08Å
C17H18sing1.08Å1.08Å
N07H19sing0.97Å1.00Å
C01O1doub1.21Å1.43Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C01C02C17120.8°120.0°
C01C02C03118.9°120.1°
C02C01H1126.6°120.0°
C02C01O1106.7°120.0°
C17C02C03120.3°119.9°
C02C17C16120.2°119.9°
C02C17H18119.9°120.1°
C02C03C04119.8°120.0°
C02C03H4120.1°120.0°
C17C16C05119.1°120.0°
C17C16H17120.4°120.0°
C16C17H18119.9°120.0°
C03C04C05119.5°120.0°
C04C03H4120.1°120.0°
C03C04H5120.2°120.0°
C16C05C04121.0°120.1°
C16C05C06120.8°120.0°
C05C16H17120.4°120.0°
C04C05C06118.2°119.9°
C05C04H5120.2°120.0°
C05C06N07116.0°120.0°
C05C06O15121.8°120.0°
C11C10C09115.0°109.2°
C10C11O12115.9°109.4°
C11C10H9108.1°109.5°
C11C10H10108.1°109.6°
C10C11H11107.9°109.5°
C10C11H12107.9°109.5°
C10C09C08108.9°109.5°
C10C09C14114.7°109.0°
C10C09H8106.8°109.6°
C09C10H9108.1°109.5°
C09C10H10108.1°109.5°
C11O12C13117.0°114.1°
O12C11H11107.8°109.5°
O12C11H12107.8°109.4°
N07C06O15122.2°120.0°
C06N07C08123.3°120.0°
C06N07H19118.4°120.0°
N07C08C0999.9°109.5°
N07C08H6111.8°109.5°
N07C08H7111.8°109.5°
C08N07H19118.3°120.0°
C08C09C14112.9°109.5°
C09C08H6111.8°109.5°
C09C08H7111.8°109.5°
C08C09H8106.2°109.5°
C09C14C13112.6°109.2°
C14C09H8106.9°109.6°
C09C14H15108.7°109.6°
C09C14H16108.7°109.5°
O12C13C14115.3°109.4°
O12C13H13108.0°109.5°
O12C13H14108.0°109.5°
C14C13H13108.0°109.5°
C14C13H14108.0°109.5°
C13C14H15108.7°109.5°
C13C14H16108.7°109.5°
H1C01O1126.7°120.0°
H6C08H7109.5°109.4°
H9C10H10109.5°109.6°
H11C11H12109.5°109.5°
H13C13H14109.5°109.5°
H15C14H16109.5°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C01C02C17C03178.9°179.8°
C01C02C17C16179.5°179.7°
C01C02C03C04179.8°180.0°
C02C01H1O1180.0°179.8°
C01C02C03H40.2°0.1°
C01C02C17H180.5°0.0°
C02C17C16H18180.0°179.7°
C17C02C03C040.9°0.2°
C02C17C16C050.9°0.5°
C17C02C01H1123.3°180.0°
C17C02C03H4179.1°179.7°
C02C17C16H17179.1°179.7°
C17C02C01O156.7°0.2°
C03C02C17C160.6°0.5°
C02C03C04H4180.0°179.9°
C02C03C04C051.4°0.1°
C03C02C01H155.6°0.2°
C02C03C04H5178.5°179.9°
C03C02C17H18179.4°179.7°
C03C02C01O1124.4°180.0°
C17C16C05H17180.0°179.8°
C17C16C05C041.5°0.2°
C17C16C05C06179.6°179.7°
C03C04C05C161.8°0.1°
C03C04C05H5180.0°180.0°
C03C04C05C06180.0°180.0°
C16C05C04C06178.2°179.9°
C16C05C06N07151.6°0.1°
C16C05C06O1528.7°180.0°
C16C05C04H5178.2°179.9°
C05C16C17H18179.1°179.8°
C04C05C06N0726.6°180.0°
C04C05C06O15153.0°0.0°
C05C04C03H4178.6°180.0°
C04C05C16H17178.5°180.0°
C05C06N07O15179.6°180.0°
C05C06N07C08179.1°180.0°
C06C05C04H50.0°0.0°
C06C05C16H170.4°0.0°
C05C06N07H190.9°0.0°
C11C10C09H9120.8°119.9°
C11C10C09H10120.8°119.9°
C10C11O12H11120.9°120.0°
C10C11O12H12121.0°120.0°
C11C10C09C0899.1°176.9°
C11C10C09C1428.4°57.0°
C10C11O12C1341.0°61.2°
C11C10C09H8146.6°62.9°
C11C10H9H10117.5°120.2°
C10C11H11H12117.1°120.1°
C09C10C11O1219.6°57.7°
C10C09C08N0775.7°65.5°
C10C09C08C14128.6°119.5°
C10C09C08H8114.7°120.3°
C10C09C14H8118.1°120.0°
C10C09C14C1355.8°57.0°
C10C09C08H642.7°174.5°
C10C09C08H7165.8°54.6°
C09C10H9H10117.5°120.1°
C09C10C11H11101.3°62.3°
C09C10C11H12140.5°177.6°
C10C09C14H15176.2°62.9°
C10C09C14H1664.7°176.9°
C11O12C13C1413.7°61.2°
O12C11C10H9101.2°177.5°
O12C11C10H10140.4°62.3°
O12C11H11H12117.1°120.0°
C11O12C13H13107.2°178.9°
C11O12C13H14134.5°58.8°
C06N07C08H19180.0°180.0°
C06N07C08C09143.1°180.0°
C06N07C08H624.7°60.0°
C06N07C08H798.5°60.0°
O15C06N07C081.3°0.0°
O15C06N07H19178.7°180.0°
N07C08C09H6118.4°120.0°
N07C08C09H7118.4°120.0°
N07C08C09C14155.7°175.0°
N07C08H6H7124.5°120.0°
N07C08C09H838.9°54.8°
C08C09C14H8116.4°120.2°
C08C09C14C1369.7°176.9°
C09C08H6H7124.5°120.0°
C08C09C10H921.7°63.2°
C08C09C10H10140.1°56.9°
C08C09C14H1550.7°56.9°
C08C09C14H16169.8°63.3°
C09C08N07H1936.9°0.0°
C09C14C13O1234.0°57.6°
C09C14C13H15120.5°120.0°
C09C14C13H16120.5°119.9°
C14C09C08H685.9°55.0°
C14C09C08H737.3°65.0°
C14C09C10H9149.2°176.9°
C14C09C10H1092.4°62.9°
C09C14C13H13154.8°177.6°
C09C14C13H1486.9°62.4°
C09C14H15H16118.6°120.2°
O12C13C14H13120.9°120.0°
O12C13C14H14120.8°120.0°
C13O12C11H1179.9°58.8°
C13O12C11H12162.0°178.8°
O12C13H13H14117.3°120.0°
O12C13C14H15154.4°62.3°
O12C13C14H1686.5°177.5°
C13C14C09H8173.9°63.0°
C14C13H13H14117.4°120.0°
C13C14H15H16118.6°120.1°
H4C03C04H51.5°0.0°
H6C08C09H8157.4°65.2°
H6C08N07H19155.3°120.0°
H7C08C09H879.5°174.8°
H7C08N07H1981.5°120.0°
H8C09C10H992.6°57.0°
H8C09C10H1025.8°177.1°
H8C09C14H1565.7°177.1°
H8C09C14H1653.4°56.9°
H9C10C11H11137.9°57.5°
H9C10C11H1219.7°62.5°
H10C10C11H1119.5°177.7°
H10C10C11H1298.7°57.7°
H13C13C14H1584.7°57.7°
H13C13C14H1634.4°62.5°
H14C13C14H1533.6°177.7°
H14C13C14H16152.7°57.5°
H17C16C17H180.9°0.0°

226262

PDB entries from 2024-10-16

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