V3K
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C07 | C04 | sing | 1.51Å | 1.53Å | |
C07 | N08 | sing | 1.46Å | 1.45Å | |
O17 | C09 | doub | 1.21Å | 1.19Å | |
C04 | C05 | sing | 1.40Å | 1.39Å | Aromatic |
C04 | C03 | doub | 1.35Å | 1.37Å | Aromatic |
N08 | C09 | sing | 1.35Å | 1.46Å | |
C09 | C10 | sing | 1.48Å | 1.52Å | |
C05 | N06 | doub | 1.31Å | 1.34Å | Aromatic |
C03 | N02 | sing | 1.35Å | 1.32Å | Aromatic |
N06 | N02 | sing | 1.40Å | 1.36Å | Aromatic |
N02 | C01 | sing | 1.46Å | 1.45Å | |
C10 | C11 | doub | 1.40Å | 1.39Å | Aromatic |
C10 | C15 | sing | 1.40Å | 1.39Å | Aromatic |
C11 | C12 | sing | 1.38Å | 1.39Å | Aromatic |
C15 | C14 | doub | 1.38Å | 1.38Å | Aromatic |
C12 | C13 | doub | 1.40Å | 1.39Å | Aromatic |
C14 | C13 | sing | 1.40Å | 1.39Å | Aromatic |
C13 | C16 | sing | 1.47Å | 1.53Å | |
C01 | H1 | sing | 1.09Å | 1.10Å | |
C01 | H2 | sing | 1.09Å | 1.10Å | |
C01 | H3 | sing | 1.09Å | 1.10Å | |
C03 | H4 | sing | 1.08Å | 1.08Å | |
C05 | H5 | sing | 1.08Å | 1.08Å | |
C07 | H6 | sing | 1.09Å | 1.10Å | |
C07 | H7 | sing | 1.09Å | 1.10Å | |
C11 | H8 | sing | 1.08Å | 1.08Å | |
C12 | H9 | sing | 1.08Å | 1.08Å | |
C14 | H10 | sing | 1.08Å | 1.08Å | |
C15 | H11 | sing | 1.08Å | 1.08Å | |
C16 | H12 | sing | 1.08Å | 1.08Å | |
N08 | H15 | sing | 0.97Å | 1.00Å | |
C16 | O1 | doub | 1.21Å | 1.43Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C04 | C07 | N08 | 111.7° | 109.5° |
C07 | C04 | C05 | 126.6° | 126.1° |
C07 | C04 | C03 | 126.8° | 126.0° |
C04 | C07 | H6 | 108.9° | 109.5° |
C04 | C07 | H7 | 108.9° | 109.5° |
C07 | N08 | C09 | 120.2° | 120.0° |
N08 | C07 | H6 | 108.9° | 109.5° |
N08 | C07 | H7 | 108.9° | 109.4° |
C07 | N08 | H15 | 119.9° | 120.0° |
O17 | C09 | N08 | 121.3° | 120.0° |
O17 | C09 | C10 | 120.5° | 120.0° |
C05 | C04 | C03 | 106.6° | 107.9° |
C04 | C05 | N06 | 108.6° | 108.2° |
C04 | C05 | H5 | 125.7° | 125.9° |
C04 | C03 | N02 | 107.6° | 107.8° |
C04 | C03 | H4 | 126.2° | 126.2° |
N08 | C09 | C10 | 118.2° | 120.0° |
C09 | N08 | H15 | 119.9° | 120.0° |
C09 | C10 | C11 | 120.1° | 119.9° |
C09 | C10 | C15 | 119.2° | 120.0° |
C05 | N06 | N02 | 106.5° | 108.2° |
N06 | C05 | H5 | 125.7° | 125.9° |
C03 | N02 | N06 | 110.7° | 107.9° |
C03 | N02 | C01 | 124.1° | 126.1° |
N02 | C03 | H4 | 126.2° | 126.1° |
N06 | N02 | C01 | 125.2° | 126.0° |
N02 | C01 | H1 | 109.5° | 109.5° |
N02 | C01 | H2 | 109.5° | 109.5° |
N02 | C01 | H3 | 109.5° | 109.5° |
C11 | C10 | C15 | 120.7° | 120.1° |
C10 | C11 | C12 | 119.9° | 120.0° |
C10 | C11 | H8 | 120.0° | 120.0° |
C10 | C15 | C14 | 119.1° | 120.0° |
C10 | C15 | H11 | 120.5° | 120.0° |
C11 | C12 | C13 | 119.5° | 120.0° |
C12 | C11 | H8 | 120.0° | 120.0° |
C11 | C12 | H9 | 120.2° | 120.1° |
C15 | C14 | C13 | 120.5° | 120.0° |
C15 | C14 | H10 | 119.7° | 120.0° |
C14 | C15 | H11 | 120.4° | 120.0° |
C12 | C13 | C14 | 120.2° | 120.0° |
C12 | C13 | C16 | 119.6° | 120.0° |
C13 | C12 | H9 | 120.3° | 120.0° |
C14 | C13 | C16 | 120.1° | 120.0° |
C13 | C14 | H10 | 119.7° | 120.1° |
C13 | C16 | H12 | 131.0° | 120.0° |
C13 | C16 | O1 | 98.0° | 120.0° |
H1 | C01 | H2 | 109.5° | 109.4° |
H1 | C01 | H3 | 109.5° | 109.5° |
H2 | C01 | H3 | 109.4° | 109.4° |
H6 | C07 | H7 | 109.5° | 109.5° |
H12 | C16 | O1 | 131.0° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C04 | C07 | N08 | H6 | 120.3° | 120.1° |
C04 | C07 | N08 | H7 | 120.3° | 120.0° |
C07 | C04 | C05 | C03 | 179.7° | 179.9° |
C04 | C07 | N08 | C09 | 98.6° | 180.0° |
C07 | C04 | C05 | N06 | 179.6° | 179.9° |
C07 | C04 | C03 | N02 | 179.8° | 180.0° |
C07 | C04 | C03 | H4 | 0.2° | 0.2° |
C07 | C04 | C05 | H5 | 0.4° | 0.1° |
C04 | C07 | H6 | H7 | 119.0° | 120.0° |
C04 | C07 | N08 | H15 | 81.4° | 0.1° |
C07 | N08 | C09 | O17 | 0.7° | 0.0° |
N08 | C07 | C04 | C05 | 88.1° | 90.0° |
N08 | C07 | C04 | C03 | 92.3° | 90.1° |
C07 | N08 | C09 | H15 | 180.0° | 180.0° |
C07 | N08 | C09 | C10 | 179.8° | 180.0° |
N08 | C07 | H6 | H7 | 119.0° | 119.9° |
O17 | C09 | N08 | C10 | 179.4° | 180.0° |
O17 | C09 | C10 | C11 | 142.1° | 0.0° |
O17 | C09 | C10 | C15 | 38.3° | 179.7° |
O17 | C09 | N08 | H15 | 179.2° | 180.0° |
C04 | C05 | N06 | H5 | 180.0° | 179.9° |
C05 | C04 | C03 | N02 | 0.2° | 0.1° |
C04 | C05 | N06 | N02 | 0.2° | 0.0° |
C05 | C04 | C03 | H4 | 179.8° | 179.7° |
C05 | C04 | C07 | H6 | 151.5° | 149.9° |
C05 | C04 | C07 | H7 | 32.2° | 29.9° |
C03 | C04 | C05 | N06 | 0.1° | 0.1° |
C04 | C03 | N02 | H4 | 180.0° | 179.8° |
C04 | C03 | N02 | N06 | 0.3° | 0.1° |
C04 | C03 | N02 | C01 | 179.9° | 179.8° |
C03 | C04 | C05 | H5 | 179.9° | 180.0° |
C03 | C04 | C07 | H6 | 28.1° | 29.9° |
C03 | C04 | C07 | H7 | 147.4° | 150.0° |
N08 | C09 | C10 | C11 | 37.3° | 180.0° |
N08 | C09 | C10 | C15 | 142.3° | 0.3° |
C09 | N08 | C07 | H6 | 141.0° | 59.9° |
C09 | N08 | C07 | H7 | 21.7° | 60.0° |
C09 | C10 | C11 | C15 | 179.5° | 179.7° |
C09 | C10 | C11 | C12 | 180.0° | 180.0° |
C09 | C10 | C15 | C14 | 179.7° | 179.8° |
C09 | C10 | C11 | H8 | 0.0° | 0.0° |
C09 | C10 | C15 | H11 | 0.2° | 0.0° |
C10 | C09 | N08 | H15 | 0.2° | 0.0° |
C05 | N06 | N02 | C03 | 0.3° | 0.1° |
C05 | N06 | N02 | C01 | 179.9° | 179.7° |
C03 | N02 | N06 | C01 | 179.6° | 179.7° |
C03 | N02 | C01 | H1 | 179.6° | 90.0° |
C03 | N02 | C01 | H2 | 59.5° | 149.9° |
C03 | N02 | C01 | H3 | 60.5° | 30.0° |
N06 | N02 | C01 | H1 | 0.0° | 90.3° |
N06 | N02 | C01 | H2 | 120.0° | 29.7° |
N06 | N02 | C01 | H3 | 120.0° | 149.6° |
N06 | N02 | C03 | H4 | 179.7° | 179.7° |
N02 | N06 | C05 | H5 | 179.8° | 179.9° |
N02 | C01 | H1 | H2 | 120.0° | 120.0° |
N02 | C01 | H1 | H3 | 120.0° | 120.0° |
N02 | C01 | H2 | H3 | 120.0° | 120.0° |
C01 | N02 | C03 | H4 | 0.1° | 0.1° |
C10 | C11 | C12 | H8 | 180.0° | 180.0° |
C11 | C10 | C15 | C14 | 0.2° | 0.5° |
C10 | C11 | C12 | C13 | 0.7° | 0.0° |
C10 | C11 | C12 | H9 | 179.3° | 179.9° |
C11 | C10 | C15 | H11 | 179.8° | 179.7° |
C15 | C10 | C11 | C12 | 0.4° | 0.2° |
C10 | C15 | C14 | H11 | 180.0° | 179.8° |
C10 | C15 | C14 | C13 | 0.3° | 0.5° |
C15 | C10 | C11 | H8 | 179.6° | 179.7° |
C10 | C15 | C14 | H10 | 179.8° | 179.7° |
C11 | C12 | C13 | H9 | 180.0° | 179.9° |
C11 | C12 | C13 | C14 | 0.8° | 0.1° |
C11 | C12 | C13 | C16 | 179.8° | 180.0° |
C15 | C14 | C13 | C12 | 0.5° | 0.2° |
C15 | C14 | C13 | H10 | 180.0° | 179.9° |
C15 | C14 | C13 | C16 | 180.0° | 179.8° |
C12 | C13 | C14 | C16 | 179.4° | 179.9° |
C13 | C12 | C11 | H8 | 179.3° | 180.0° |
C12 | C13 | C14 | H10 | 179.5° | 180.0° |
C12 | C13 | C16 | H12 | 83.0° | 180.0° |
C12 | C13 | C16 | O1 | 97.0° | 0.1° |
C14 | C13 | C12 | H9 | 179.2° | 180.0° |
C13 | C14 | C15 | H11 | 179.7° | 179.8° |
C14 | C13 | C16 | H12 | 96.5° | 0.0° |
C14 | C13 | C16 | O1 | 83.5° | 180.0° |
C16 | C13 | C12 | H9 | 0.2° | 0.1° |
C16 | C13 | C14 | H10 | 0.0° | 0.1° |
C13 | C16 | H12 | O1 | 180.0° | 179.9° |
H1 | C01 | H2 | H3 | 120.0° | 120.0° |
H6 | C07 | N08 | H15 | 39.0° | 120.0° |
H7 | C07 | N08 | H15 | 158.3° | 120.0° |
H8 | C11 | C12 | H9 | 0.7° | 0.1° |
H10 | C14 | C15 | H11 | 0.3° | 0.1° |