V3C
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CA | N | sing | 1.48Å | 1.47Å | |
CA | CB | sing | 1.54Å | 1.53Å | |
CA | C | sing | 1.51Å | 1.53Å | |
N | CD | sing | 1.49Å | 1.47Å | |
CB | CG | sing | 1.55Å | 1.54Å | |
CD | CG | sing | 1.55Å | 1.53Å | |
C | O | doub | 1.21Å | 1.23Å | |
CG | C53 | sing | 1.53Å | 1.53Å | |
C53 | C56 | sing | 1.53Å | 1.52Å | |
C | OXT | sing | 1.34Å | 1.35Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CD | HD3 | sing | 1.09Å | 1.10Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
C53 | H162 | sing | 1.09Å | 1.10Å | |
C53 | H161 | sing | 1.09Å | 1.10Å | |
C56 | H170 | sing | 1.09Å | 1.10Å | |
C56 | H171 | sing | 1.09Å | 1.10Å | |
C56 | H169 | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | CB | 103.2° | 107.1° |
N | CA | C | 110.1° | 109.9° |
CA | N | CD | 112.7° | 105.8° |
N | CA | HA | 110.7° | 109.9° |
CA | N | H | 108.6° | 111.0° |
CB | CA | C | 113.1° | 109.9° |
CA | CB | CG | 104.5° | 105.1° |
CB | CA | HA | 109.8° | 109.9° |
CA | CB | HB2 | 110.7° | 110.3° |
CA | CB | HB3 | 110.7° | 110.3° |
CA | C | O | 121.2° | 120.0° |
CA | C | OXT | 117.0° | 120.0° |
C | CA | HA | 109.8° | 110.1° |
N | CD | CG | 102.5° | 103.2° |
N | CD | HD3 | 111.2° | 110.7° |
N | CD | HD2 | 111.2° | 110.8° |
CD | N | H | 108.7° | 111.0° |
CB | CG | CD | 102.4° | 102.9° |
CB | CG | C53 | 114.0° | 110.7° |
CG | CB | HB2 | 110.7° | 110.3° |
CG | CB | HB3 | 110.7° | 110.3° |
CB | CG | HG2 | 108.2° | 110.7° |
CD | CG | C53 | 115.5° | 110.7° |
CD | CG | HG2 | 108.3° | 110.9° |
CG | CD | HD3 | 111.2° | 110.7° |
CG | CD | HD2 | 111.2° | 110.7° |
O | C | OXT | 121.8° | 120.0° |
CG | C53 | C56 | 114.1° | 109.5° |
C53 | CG | HG2 | 108.2° | 110.7° |
CG | C53 | H162 | 108.3° | 109.4° |
CG | C53 | H161 | 108.3° | 109.5° |
C56 | C53 | H162 | 108.3° | 109.5° |
C56 | C53 | H161 | 108.3° | 109.5° |
C53 | C56 | H170 | 109.5° | 109.4° |
C53 | C56 | H171 | 109.4° | 109.4° |
C53 | C56 | H169 | 109.5° | 109.4° |
C | OXT | HXT | 109.5° | 117.0° |
HB2 | CB | HB3 | 109.5° | 110.4° |
HD3 | CD | HD2 | 109.5° | 110.6° |
H162 | C53 | H161 | 109.5° | 109.5° |
H170 | C56 | H171 | 109.5° | 109.6° |
H170 | C56 | H169 | 109.4° | 109.5° |
H171 | C56 | H169 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | CB | C | 118.9° | 119.3° |
N | CA | CB | HA | 118.0° | 119.4° |
N | CA | C | HA | 122.1° | 121.2° |
CA | N | CD | H | 120.5° | 120.5° |
N | CA | CB | CG | 24.9° | 1.2° |
CA | N | CD | CG | 21.0° | 39.2° |
N | CA | C | O | 9.0° | 18.6° |
N | CA | C | OXT | 169.2° | 161.2° |
N | CA | CB | HB2 | 144.2° | 117.7° |
N | CA | CB | HB3 | 94.3° | 120.1° |
CA | N | CD | HD3 | 97.9° | 157.7° |
CA | N | CD | HD2 | 139.8° | 79.3° |
CB | CA | C | HA | 123.0° | 121.2° |
CB | CA | N | CD | 2.4° | 25.3° |
CA | CB | CG | HB2 | 119.2° | 118.9° |
CA | CB | CG | HB3 | 119.2° | 118.9° |
CA | CB | CG | CD | 37.7° | 22.0° |
CB | CA | C | O | 105.9° | 99.0° |
CA | CB | CG | C53 | 163.1° | 140.3° |
CB | CA | C | OXT | 75.9° | 81.2° |
CA | CB | HB2 | HB3 | 122.3° | 122.2° |
CA | CB | CG | HG2 | 76.5° | 96.5° |
CB | CA | N | H | 118.1° | 145.8° |
C | CA | N | CD | 118.6° | 144.7° |
C | CA | CB | CG | 94.0° | 120.5° |
CA | C | O | OXT | 178.1° | 179.8° |
C | CA | CB | HB2 | 25.2° | 1.6° |
C | CA | CB | HB3 | 146.7° | 120.6° |
C | CA | N | H | 120.9° | 94.8° |
CA | C | OXT | HXT | 178.2° | 179.7° |
N | CD | CG | CB | 35.2° | 37.4° |
N | CD | CG | HD3 | 118.9° | 118.4° |
N | CD | CG | HD2 | 118.9° | 118.6° |
N | CD | CG | C53 | 159.6° | 155.8° |
CD | N | CA | HA | 119.8° | 94.0° |
N | CD | CG | HG2 | 79.0° | 81.0° |
N | CD | HD3 | HD2 | 123.3° | 123.2° |
CB | CG | CD | C53 | 124.4° | 118.3° |
CB | CG | CD | HG2 | 114.1° | 118.4° |
CB | CG | C53 | HG2 | 120.4° | 123.2° |
CB | CG | C53 | C56 | 177.9° | 175.0° |
CG | CB | CA | HA | 143.0° | 118.1° |
CG | CB | HB2 | HB3 | 122.3° | 122.1° |
CB | CG | CD | HD3 | 83.7° | 155.9° |
CB | CG | CD | HD2 | 154.0° | 81.1° |
CB | CG | C53 | H162 | 61.4° | 55.0° |
CB | CG | C53 | H161 | 57.2° | 65.0° |
CD | CG | C53 | HG2 | 121.5° | 123.4° |
CD | CG | C53 | C56 | 59.8° | 71.5° |
CD | CG | CB | HB2 | 156.9° | 140.9° |
CD | CG | CB | HB3 | 81.5° | 97.0° |
CG | CD | HD3 | HD2 | 123.3° | 123.0° |
CD | CG | C53 | H162 | 179.6° | 168.5° |
CD | CG | C53 | H161 | 60.9° | 48.5° |
CG | CD | N | H | 141.5° | 159.7° |
O | C | CA | HA | 131.1° | 139.8° |
O | C | OXT | HXT | 0.0° | 0.1° |
CG | C53 | C56 | H162 | 120.7° | 120.0° |
CG | C53 | C56 | H161 | 120.7° | 120.0° |
C53 | CG | CB | HB2 | 77.7° | 100.8° |
C53 | CG | CB | HB3 | 43.9° | 21.4° |
C53 | CG | CD | HD3 | 40.7° | 85.8° |
C53 | CG | CD | HD2 | 81.6° | 37.2° |
CG | C53 | H162 | H161 | 117.9° | 120.0° |
CG | C53 | C56 | H170 | 180.0° | 60.0° |
CG | C53 | C56 | H171 | 60.0° | 60.1° |
CG | C53 | C56 | H169 | 60.0° | 180.0° |
C56 | C53 | CG | HG2 | 61.7° | 51.9° |
C56 | C53 | H162 | H161 | 117.9° | 120.0° |
C53 | C56 | H170 | H171 | 120.0° | 120.0° |
C53 | C56 | H170 | H169 | 120.0° | 120.0° |
C53 | C56 | H171 | H169 | 120.0° | 119.9° |
OXT | C | CA | HA | 47.0° | 40.0° |
HA | CA | CB | HB2 | 97.8° | 123.0° |
HA | CA | CB | HB3 | 23.7° | 0.8° |
HA | CA | N | H | 0.7° | 26.5° |
HB2 | CB | CG | HG2 | 42.7° | 22.4° |
HB3 | CB | CG | HG2 | 164.3° | 144.5° |
HG2 | CG | CD | HD3 | 162.2° | 37.4° |
HG2 | CG | CD | HD2 | 39.9° | 160.4° |
HG2 | CG | C53 | H162 | 59.0° | 68.1° |
HG2 | CG | C53 | H161 | 177.6° | 171.8° |
HD3 | CD | N | H | 22.6° | 81.8° |
HD2 | CD | N | H | 99.7° | 41.2° |
H162 | C53 | C56 | H170 | 59.3° | 180.0° |
H162 | C53 | C56 | H171 | 179.3° | 59.9° |
H162 | C53 | C56 | H169 | 60.7° | 60.0° |
H161 | C53 | C56 | H170 | 59.3° | 60.0° |
H161 | C53 | C56 | H171 | 60.7° | 180.0° |
H161 | C53 | C56 | H169 | 179.3° | 60.0° |
H170 | C56 | H171 | H169 | 120.0° | 120.1° |