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V2G

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N6C6sing1.38Å1.33Å
N1C6doub1.33Å1.37ÅAromatic
N1C2sing1.32Å1.47ÅAromatic
C6C5sing1.41Å1.31ÅAromatic
C5N7sing1.36Å1.34ÅAromatic
C5C4doub1.41Å1.34ÅAromatic
C2N3doub1.32Å1.44ÅAromatic
N7C8doub1.30Å1.34ÅAromatic
C4N3sing1.33Å1.35ÅAromatic
C4N9sing1.37Å1.32ÅAromatic
C8N9sing1.36Å1.34ÅAromatic
N9C1'sing1.47Å1.46Å
O2'C2'sing1.43Å1.43Å
C2'C1'sing1.55Å1.56Å
C2'C3'sing1.55Å1.54Å
C1'O4'sing1.44Å1.43Å
C3'O3'sing1.43Å1.45Å
C3'C4'sing1.54Å1.49Å
O4'C4'sing1.44Å1.45Å
C4'C5'sing1.53Å1.52Å
C5'O5'sing1.43Å1.43Å
O2Pdoub1.48Å1.49Å
O5'Psing1.61Å1.65Å
PNsing1.68Å1.51Å
PO1sing1.61Å1.49Å
NCAsing1.47Å1.46Å
OXTCdoub1.21Å1.24Å
CCAsing1.51Å1.51Å
COsing1.34Å1.25Å
NH1sing1.01Å1.00Å
CAH2sing1.09Å1.10Å
CAH3sing1.09Å1.10Å
OH4sing0.97Å0.95Å
O1H5sing0.97Å0.95Å
C5'H6sing1.09Å1.10Å
C5'H7sing1.09Å1.10Å
C4'H8sing1.09Å1.10Å
C3'H9sing1.09Å1.10Å
O3'H10sing0.97Å0.95Å
C2'H11sing1.09Å1.10Å
O2'H12sing0.97Å0.95Å
C1'H13sing1.09Å1.10Å
C8H14sing1.08Å1.08Å
C2H15sing1.08Å1.08Å
N6H16sing0.97Å1.00Å
N6H17sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N6C6N1123.5°120.7°
N6C6C5115.5°120.8°
C6N6H16109.5°120.0°
C6N6H17109.4°119.9°
C6N1C2123.6°121.2°
N1C6C5121.0°118.5°
N1C2N3110.0°122.5°
N1C2H15125.0°118.8°
C6C5N7131.8°134.7°
C6C5C4119.3°118.2°
N7C5C4108.6°107.1°
C5N7C8107.0°109.4°
C5C4N3123.4°119.1°
C5C4N9106.9°106.0°
C2N3C4122.5°120.7°
N3C2H15125.0°118.8°
N7C8N9107.5°110.0°
N7C8H14126.3°125.0°
N3C4N9129.4°135.0°
C4N9C8109.4°107.5°
C4N9C1'122.9°126.2°
C8N9C1'127.0°126.3°
N9C8H14126.2°125.0°
N9C1'C2'109.6°110.6°
N9C1'O4'109.3°110.7°
N9C1'H13111.8°110.7°
O2'C2'C1'110.9°110.9°
O2'C2'C3'111.9°111.0°
O2'C2'H11110.9°110.9°
C2'O2'H12109.5°114.0°
C1'C2'C3'104.4°102.0°
C2'C1'O4'103.1°103.5°
C1'C2'H11109.1°110.9°
C2'C1'H13110.3°110.6°
C2'C3'O3'113.0°110.5°
C2'C3'C4'99.0°104.2°
C2'C3'H9110.8°110.6°
C3'C2'H11109.4°110.9°
C1'O4'C4'101.2°107.0°
O4'C1'H13112.4°110.6°
O3'C3'C4'109.4°110.5°
O3'C3'H9112.3°110.4°
C3'O3'H10109.5°114.1°
C3'C4'O4'102.8°107.4°
C3'C4'C5'111.9°109.9°
C3'C4'H8109.7°109.9°
C4'C3'H9111.5°110.5°
O4'C4'C5'112.6°109.9°
O4'C4'H8110.4°109.9°
C4'C5'O5'107.0°109.4°
C4'C5'H6110.1°109.5°
C4'C5'H7110.1°109.5°
C5'C4'H8109.3°109.9°
C5'O5'P123.1°123.0°
O5'C5'H6110.1°109.5°
O5'C5'H7110.1°109.5°
O2PO5'114.6°109.5°
O2PN103.6°109.5°
O2PO1120.4°109.5°
O5'PN99.6°109.4°
O5'PO1107.7°109.4°
NPO1108.7°109.5°
PNCA118.9°111.0°
PNH1107.1°111.0°
PO1H5109.5°114.1°
NCAC105.4°109.5°
CANH1107.1°111.0°
NCAH2110.5°109.5°
NCAH3110.5°109.5°
OXTCCA115.8°119.9°
OXTCO127.3°120.0°
CACO116.7°120.0°
CCAH2110.5°109.5°
CCAH3110.5°109.5°
COH4109.5°117.0°
H2CAH3109.5°109.4°
H6C5'H7109.5°109.5°
H16N6H17109.5°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N6C6N1C5179.8°179.6°
N6C6N1C2175.0°180.0°
N6C6C5N75.3°0.3°
N6C6C5C4178.9°179.9°
C6N6H16H17120.0°179.9°
N1C6C5N7174.8°179.9°
N1C6C5C41.3°0.4°
C6N1C2N34.3°0.2°
C6N1C2H15175.7°179.8°
N1C6N6H160.0°0.1°
N1C6N6H17120.0°180.0°
C2N1C6C55.2°0.4°
N1C2N3H15180.0°180.0°
N1C2N3C40.0°0.0°
C6C5N7C4174.1°179.8°
C6C5N7C8179.6°180.0°
C6C5C4N33.1°0.2°
C6C5C4N9177.5°179.9°
C5C6N6H16179.8°179.6°
C5C6N6H1760.2°0.5°
N7C5C4N3171.8°180.0°
N7C5C4N92.5°0.3°
C5N7C8N97.7°0.0°
C5N7C8H14172.3°180.0°
C5C4N3C23.7°0.0°
C4C5N7C86.4°0.2°
C5C4N3N9173.0°179.6°
C5C4N9C82.3°0.3°
C5C4N9C1'173.0°179.9°
C2N3C4N9176.7°179.6°
N7C8N9C46.3°0.2°
N7C8N9H14180.0°180.0°
N7C8N9C1'176.5°180.0°
N3C4N9C8176.2°180.0°
N3C4N9C1'13.1°0.2°
C4N3C2H15180.0°180.0°
C4N9C8C1'170.2°179.8°
C4N9C1'C2'98.8°84.8°
C4N9C1'O4'148.8°161.2°
C4N9C1'H1323.8°38.2°
C4N9C8H14173.7°179.8°
C8N9C1'C2'70.1°95.0°
C8N9C1'O4'42.2°19.1°
C8N9C1'H13167.2°142.0°
N9C1'C2'O2'110.3°86.3°
N9C1'C2'O4'116.3°118.5°
N9C1'C2'H13123.5°123.0°
N9C1'C2'C3'129.0°155.5°
N9C1'O4'H13124.7°123.0°
N9C1'O4'C4'157.3°158.4°
N9C1'C2'H1112.1°37.4°
C1'N9C8H143.5°0.0°
O2'C2'C1'C3'120.7°118.2°
O2'C2'C1'H11122.4°123.7°
O2'C2'C3'H11123.3°123.7°
O2'C2'C1'O4'133.4°155.2°
O2'C2'C3'O3'14.8°20.4°
O2'C2'C3'C4'100.9°139.1°
O2'C2'C3'H9141.9°102.2°
O2'C2'C1'H1313.2°36.7°
C1'C2'C3'H11116.7°118.2°
C2'C1'O4'H13118.8°118.5°
C1'C2'C3'O3'134.9°97.8°
C1'C2'C3'C4'19.2°20.9°
C2'C1'O4'C4'40.7°40.0°
C1'C2'C3'H998.1°139.6°
C1'C2'O2'H12180.0°180.0°
C3'C2'C1'O4'12.7°37.0°
C2'C3'O3'C4'109.3°114.8°
C2'C3'O3'H9126.3°122.6°
C2'C3'C4'H9116.7°118.8°
C2'C3'C4'O4'45.2°2.0°
C2'C3'C4'C5'166.2°121.4°
C2'C3'C4'H872.2°117.5°
C2'C3'O3'H10180.0°65.2°
C3'C2'O2'H1263.8°67.3°
C3'C2'C1'H13107.5°81.5°
C1'O4'C4'C3'56.0°26.5°
C1'O4'C4'C5'176.6°145.9°
C1'O4'C4'H860.9°93.0°
O4'C1'C2'H11104.2°81.1°
O3'C3'C4'H9124.8°122.5°
O3'C3'C4'O4'163.6°120.7°
O3'C3'C4'C5'75.3°119.9°
O3'C3'C4'H846.2°1.2°
O3'C3'C2'H11108.4°144.0°
C3'C4'O4'C5'120.6°119.4°
C3'C4'O4'H8116.9°119.5°
C3'C4'C5'H8121.7°121.0°
C3'C4'C5'O5'175.5°175.3°
C3'C4'C5'H664.9°64.7°
C3'C4'C5'H755.9°55.3°
C4'C3'O3'H1070.7°180.0°
C4'C3'C2'H11135.9°97.3°
O4'C4'C5'H8123.0°121.1°
O4'C4'C5'O5'60.2°66.8°
O4'C4'C5'H6179.9°53.3°
O4'C4'C5'H759.4°173.3°
O4'C4'C3'H971.5°116.9°
C4'O4'C1'H1378.1°78.5°
C4'C5'O5'H6119.6°120.0°
C4'C5'O5'H7119.6°120.0°
C4'C5'O5'P34.0°180.0°
C4'C5'H6H7121.1°120.0°
C5'C4'C3'H949.5°2.6°
C5'O5'PO226.6°50.0°
C5'O5'PN136.5°70.0°
C5'O5'PO1110.2°170.0°
O5'C5'H6H7121.2°120.0°
O5'C5'C4'H862.8°54.3°
O2PO5'N109.9°120.0°
O2PO5'O1136.8°120.0°
O2PNO1129.2°120.0°
O2PNCA170.4°180.0°
O2PNH168.3°56.0°
O2PO1H50.0°180.0°
O5'PNO1112.5°119.9°
O5'PNCA71.3°60.0°
O5'PNH150.1°64.0°
O5'PO1H5133.8°60.0°
PO5'C5'H685.6°60.0°
PO5'C5'H7153.6°60.1°
PNCAH1121.3°124.0°
PNCAC165.6°135.0°
PNCAH246.3°105.0°
PNCAH375.0°15.0°
NPO1H5119.1°60.0°
O1PNCA41.2°60.0°
O1PNH1162.5°176.1°
NCACOXT42.4°0.0°
NCACH2119.3°120.0°
NCACH3119.4°120.0°
NCACO141.9°180.0°
NCAH2H3121.9°120.0°
OXTCCAO175.7°180.0°
OXTCCAH276.9°120.0°
OXTCCAH3161.8°120.0°
OXTCOH40.0°0.1°
CCANH173.0°11.1°
CCAH2H3121.9°120.0°
CACOH4175.1°180.0°
OCCAH298.8°60.0°
OCCAH322.5°59.9°
H1NCAH2167.6°131.1°
H1NCAH346.3°109.0°
H6C5'C4'H856.8°174.3°
H7C5'C4'H8177.6°65.7°
H8C4'C3'H9171.0°123.7°
H9C3'O3'H1053.7°57.4°
H9C3'C2'H1118.6°21.5°
H11C2'O2'H1258.6°56.4°
H11C2'C1'H13135.6°160.4°

224931

PDB entries from 2024-09-11

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