V1V
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.21Å | 1.19Å | |
C | C23 | sing | 1.51Å | 1.62Å | |
C23 | O24 | sing | 1.43Å | 1.40Å | |
C23 | CA | sing | 1.53Å | 1.69Å | |
CA | N | sing | 1.47Å | 1.30Å | |
CA | C03 | sing | 1.53Å | 1.57Å | |
C03 | C02 | sing | 1.53Å | 1.52Å | |
C01 | C02 | sing | 1.53Å | 1.54Å | |
C | OXT | sing | 1.34Å | 1.44Å | |
C01 | H1 | sing | 1.09Å | 1.10Å | |
C01 | H10 | sing | 1.09Å | 1.10Å | |
C01 | H3 | sing | 1.09Å | 1.10Å | |
C02 | H4 | sing | 1.09Å | 1.10Å | |
C02 | H5 | sing | 1.09Å | 1.10Å | |
C03 | H6 | sing | 1.09Å | 1.10Å | |
C03 | H7 | sing | 1.09Å | 1.10Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
C23 | H12 | sing | 1.09Å | 1.10Å | |
O24 | H13 | sing | 0.97Å | 0.95Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | C23 | 125.9° | 120.0° |
O | C | OXT | 119.0° | 120.0° |
C | C23 | O24 | 105.8° | 109.5° |
C | C23 | CA | 113.1° | 109.4° |
C23 | C | OXT | 115.1° | 120.0° |
C | C23 | H12 | 112.0° | 109.5° |
O24 | C23 | CA | 98.3° | 109.4° |
O24 | C23 | H12 | 115.7° | 109.5° |
C23 | O24 | H13 | 109.5° | 114.0° |
C23 | CA | N | 108.7° | 109.5° |
C23 | CA | C03 | 108.0° | 109.4° |
C23 | CA | HA | 106.7° | 109.5° |
CA | C23 | H12 | 111.1° | 109.5° |
N | CA | C03 | 113.0° | 109.4° |
N | CA | HA | 112.0° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
CA | C03 | C02 | 116.3° | 109.4° |
CA | C03 | H6 | 107.7° | 109.5° |
CA | C03 | H7 | 107.7° | 109.5° |
C03 | CA | HA | 108.1° | 109.5° |
C03 | C02 | C01 | 111.9° | 109.4° |
C03 | C02 | H4 | 108.9° | 109.5° |
C03 | C02 | H5 | 108.9° | 109.5° |
C02 | C03 | H6 | 107.7° | 109.5° |
C02 | C03 | H7 | 107.7° | 109.5° |
C02 | C01 | H1 | 109.5° | 109.5° |
C02 | C01 | H10 | 109.5° | 109.5° |
C02 | C01 | H3 | 109.5° | 109.4° |
C01 | C02 | H4 | 108.9° | 109.5° |
C01 | C02 | H5 | 108.9° | 109.4° |
C | OXT | HXT | 109.5° | 117.0° |
H1 | C01 | H10 | 109.5° | 109.5° |
H1 | C01 | H3 | 109.5° | 109.4° |
H10 | C01 | H3 | 109.5° | 109.5° |
H4 | C02 | H5 | 109.5° | 109.5° |
H6 | C03 | H7 | 109.5° | 109.5° |
H | N | H2 | 109.4° | 110.9° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | C23 | OXT | 179.3° | 180.0° |
O | C | C23 | O24 | 174.3° | 5.0° |
O | C | C23 | CA | 67.8° | 115.0° |
O | C | C23 | H12 | 58.8° | 125.0° |
O | C | OXT | HXT | 0.0° | 0.1° |
C | C23 | O24 | CA | 117.0° | 119.9° |
C | C23 | O24 | H12 | 124.7° | 120.1° |
C | C23 | CA | H12 | 127.0° | 120.0° |
C | C23 | CA | N | 34.0° | 60.0° |
C | C23 | CA | C03 | 157.1° | 180.0° |
C | C23 | CA | HA | 86.9° | 60.0° |
C | C23 | O24 | H13 | 180.0° | 59.9° |
C23 | C | OXT | HXT | 179.4° | 179.9° |
O24 | C23 | CA | H12 | 121.8° | 120.0° |
O24 | C23 | CA | N | 145.3° | 180.0° |
O24 | C23 | CA | C03 | 91.7° | 60.0° |
O24 | C23 | C | OXT | 6.4° | 175.0° |
O24 | C23 | CA | HA | 24.3° | 60.0° |
C23 | CA | N | C03 | 120.0° | 120.0° |
C23 | CA | N | HA | 117.7° | 120.1° |
C23 | CA | C03 | HA | 115.1° | 120.0° |
C23 | CA | C03 | C02 | 142.1° | 175.0° |
CA | C23 | C | OXT | 112.9° | 65.0° |
C23 | CA | C03 | H6 | 21.2° | 55.0° |
C23 | CA | C03 | H7 | 96.9° | 65.0° |
C23 | CA | N | H | 180.0° | 63.9° |
C23 | CA | N | H2 | 60.0° | 59.9° |
CA | C23 | O24 | H13 | 63.0° | 60.0° |
N | CA | C03 | HA | 124.5° | 120.0° |
N | CA | C03 | C02 | 21.7° | 65.0° |
N | CA | C03 | H6 | 99.2° | 175.0° |
N | CA | C03 | H7 | 142.7° | 55.0° |
CA | N | H | H2 | 120.0° | 123.8° |
N | CA | C23 | H12 | 93.0° | 60.0° |
CA | C03 | C02 | H6 | 121.0° | 120.0° |
CA | C03 | C02 | H7 | 121.0° | 120.0° |
CA | C03 | C02 | C01 | 85.2° | 179.9° |
CA | C03 | C02 | H4 | 154.4° | 60.0° |
CA | C03 | C02 | H5 | 35.1° | 60.0° |
CA | C03 | H6 | H7 | 116.9° | 120.0° |
C03 | CA | N | H | 60.0° | 176.1° |
C03 | CA | N | H2 | 180.0° | 60.0° |
C03 | CA | C23 | H12 | 30.0° | 59.9° |
C03 | C02 | C01 | H4 | 120.4° | 120.0° |
C03 | C02 | C01 | H5 | 120.3° | 120.0° |
C03 | C02 | C01 | H1 | 180.0° | 60.1° |
C03 | C02 | C01 | H10 | 60.0° | 60.0° |
C03 | C02 | C01 | H3 | 60.0° | 180.0° |
C03 | C02 | H4 | H5 | 118.9° | 120.0° |
C02 | C03 | H6 | H7 | 116.9° | 120.0° |
C02 | C03 | CA | HA | 102.8° | 55.0° |
C02 | C01 | H1 | H10 | 120.0° | 120.0° |
C02 | C01 | H1 | H3 | 120.0° | 119.9° |
C02 | C01 | H10 | H3 | 120.0° | 120.0° |
C01 | C02 | H4 | H5 | 118.9° | 120.0° |
C01 | C02 | C03 | H6 | 35.8° | 60.0° |
C01 | C02 | C03 | H7 | 153.8° | 60.1° |
OXT | C | C23 | H12 | 120.5° | 55.0° |
H1 | C01 | H10 | H3 | 120.0° | 120.0° |
H1 | C01 | C02 | H4 | 59.6° | 60.0° |
H1 | C01 | C02 | H5 | 59.7° | 180.0° |
H10 | C01 | C02 | H4 | 179.6° | 180.0° |
H10 | C01 | C02 | H5 | 60.3° | 60.0° |
H3 | C01 | C02 | H4 | 60.4° | 60.0° |
H3 | C01 | C02 | H5 | 179.7° | 60.0° |
H4 | C02 | C03 | H6 | 84.6° | 180.0° |
H4 | C02 | C03 | H7 | 33.5° | 60.0° |
H5 | C02 | C03 | H6 | 156.1° | 60.0° |
H5 | C02 | C03 | H7 | 85.8° | 180.0° |
H6 | C03 | CA | HA | 136.3° | 65.0° |
H7 | C03 | CA | HA | 18.2° | 175.0° |
HA | CA | N | H | 62.3° | 56.2° |
HA | CA | N | H2 | 57.7° | 180.0° |
HA | CA | C23 | H12 | 146.1° | 180.0° |
H12 | C23 | O24 | H13 | 55.3° | 180.0° |