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SummaryGeometryRelated PDB entries

V1L

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C02N03sing1.46Å1.46Å
C02C08sing1.53Å1.51Å
N03C04sing1.33Å1.37Å
C04O05doub1.21Å1.22Å
C04C06sing1.50Å1.49Å
C08C07sing1.53Å1.49Å
C07C06sing1.53Å1.52Å
C06H1sing1.09Å1.10Å
C06H2sing1.09Å1.10Å
C07H3sing1.09Å1.10Å
C07H4sing1.09Å1.10Å
C08H5sing1.09Å1.10Å
C08H6sing1.09Å1.10Å
C02H7sing1.09Å1.10Å
C02H8sing1.09Å1.10Å
N03H9sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N03C02C08113.4°110.6°
C02N03C04126.9°124.1°
N03C02H7108.5°109.2°
N03C02H8108.5°109.3°
C02N03H9116.6°118.0°
C02C08C07118.0°108.7°
C02C08H5107.3°109.6°
C02C08H6107.3°109.8°
C08C02H7108.5°109.7°
C08C02H8108.5°108.9°
N03C04O05121.3°118.2°
N03C04C06119.2°123.5°
C04N03H9116.6°117.9°
O05C04C06119.5°118.3°
C04C06C07116.1°109.9°
C04C06H1107.8°109.4°
C04C06H2107.8°109.4°
C08C07C06113.9°108.4°
C08C07H3108.4°109.7°
C08C07H4108.4°109.7°
C07C08H5107.3°109.6°
C07C08H6107.3°109.6°
C07C06H1107.8°109.4°
C07C06H2107.8°109.3°
C06C07H3108.4°109.7°
C06C07H4108.4°109.7°
H1C06H2109.5°109.4°
H3C07H4109.4°109.7°
H5C08H6109.5°109.6°
H7C02H8109.5°109.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N03C02C08H7120.6°120.6°
N03C02C08H8120.6°120.1°
C02N03C04H9180.0°179.5°
C02N03C04O05175.3°178.1°
C02N03C04C063.1°1.7°
N03C02C08C0726.4°50.6°
N03C02C08H594.8°69.2°
N03C02C08H6147.6°170.4°
N03C02H7H8118.2°119.4°
C08C02N03C043.2°18.6°
C02C08C07H5121.2°119.8°
C02C08C07H6121.2°119.9°
C02C08C07C0642.2°67.6°
C02C08C07H3162.8°172.7°
C02C08C07H478.5°52.2°
C02C08H5H6116.1°120.5°
C08C02H7H8118.2°119.2°
C08C02N03H9176.8°160.9°
N03C04O05C06178.4°179.8°
N03C04C06C0713.1°17.3°
N03C04C06H1134.1°102.8°
N03C04C06H2107.8°137.4°
C04N03C02H7123.8°139.4°
C04N03C02H8117.4°101.3°
O05C04C06C07168.4°162.4°
O05C04C06H147.4°77.4°
O05C04C06H270.6°42.4°
O05C04N03H94.7°2.4°
C04C06C07C0834.6°48.9°
C04C06C07H1121.0°120.1°
C04C06C07H2121.0°120.1°
C04C06H1H2117.0°119.8°
C04C06C07H3155.3°168.6°
C04C06C07H486.0°70.9°
C06C04N03H9176.9°177.8°
C08C07C06H3120.7°119.7°
C08C07C06H4120.7°119.8°
C08C07C06H1155.6°71.2°
C08C07C06H286.3°169.0°
C08C07H3H4118.0°120.6°
C07C08H5H6116.2°120.3°
C07C08C02H7147.0°171.1°
C07C08C02H894.2°69.5°
C07C06H1H2117.0°119.7°
C06C07H3H4118.0°120.5°
C06C07C08H579.0°52.2°
C06C07C08H6163.4°172.5°
H1C06C07H383.7°48.5°
H1C06C07H435.0°169.0°
H2C06C07H334.4°71.3°
H2C06C07H4153.0°49.2°
H3C07C08H541.6°67.5°
H3C07C08H675.9°52.8°
H4C07C08H5160.3°172.0°
H4C07C08H642.7°67.7°
H5C08C02H725.8°51.4°
H5C08C02H8144.6°170.7°
H6C08C02H791.8°69.1°
H6C08C02H827.1°50.3°
H7C02N03H956.2°40.1°
H8C02N03H962.7°79.2°

224201

PDB entries from 2024-08-28

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