UZL
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3' | C3' | sing | 1.43Å | 1.44Å | |
| C3' | C2' | sing | 1.55Å | 1.54Å | |
| C3' | C4' | sing | 1.54Å | 1.53Å | |
| C2' | O2' | sing | 1.43Å | 1.42Å | |
| C2' | C1' | sing | 1.55Å | 1.54Å | |
| O2' | CM2 | sing | 1.43Å | 1.42Å | |
| O5' | C5' | sing | 1.43Å | 1.44Å | |
| O2 | C2 | doub | 1.22Å | 1.23Å | |
| C4' | C5' | sing | 1.53Å | 1.51Å | |
| C4' | O4' | sing | 1.44Å | 1.46Å | |
| N3 | C2 | sing | 1.33Å | 1.34Å | |
| N3 | C4 | doub | 1.33Å | 1.34Å | |
| C2 | N1 | sing | 1.35Å | 1.39Å | |
| N4 | C4 | sing | 1.38Å | 1.33Å | |
| C4 | C5 | sing | 1.41Å | 1.42Å | |
| N1 | C1' | sing | 1.47Å | 1.49Å | |
| N1 | C6 | sing | 1.36Å | 1.36Å | |
| C1' | O4' | sing | 1.45Å | 1.42Å | |
| C5 | C6 | doub | 1.35Å | 1.34Å | |
| C5 | H1' | sing | 1.08Å | 1.08Å | |
| C6 | H2' | sing | 1.08Å | 1.08Å | |
| N4 | HN41 | sing | 0.97Å | 1.00Å | |
| N4 | HN42 | sing | 0.97Å | 1.00Å | |
| C1' | H1 | sing | 1.09Å | 1.10Å | |
| C2' | H2 | sing | 1.09Å | 1.10Å | |
| CM2 | HM21 | sing | 1.09Å | 1.10Å | |
| CM2 | HM22 | sing | 1.09Å | 1.10Å | |
| CM2 | HM23 | sing | 1.09Å | 1.10Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'' | sing | 1.09Å | 1.10Å | |
| O5' | HO5' | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3' | C3' | C2' | 114.7° | 110.5° |
| O3' | C3' | C4' | 111.5° | 110.5° |
| O3' | C3' | H3' | 111.1° | 110.6° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C2' | C3' | C4' | 99.5° | 104.1° |
| C3' | C2' | O2' | 113.9° | 110.5° |
| C3' | C2' | C1' | 100.5° | 104.0° |
| C3' | C2' | H2 | 110.5° | 110.6° |
| C2' | C3' | H3' | 109.7° | 110.5° |
| C3' | C4' | C5' | 116.6° | 110.4° |
| C3' | C4' | O4' | 105.0° | 104.8° |
| C4' | C3' | H3' | 109.7° | 110.5° |
| C3' | C4' | H4' | 108.1° | 110.4° |
| O2' | C2' | C1' | 108.8° | 110.5° |
| C2' | O2' | CM2 | 116.4° | 114.0° |
| O2' | C2' | H2 | 112.2° | 110.5° |
| C2' | C1' | N1 | 115.3° | 110.3° |
| C2' | C1' | O4' | 106.9° | 104.8° |
| C2' | C1' | H1 | 107.9° | 110.5° |
| C1' | C2' | H2 | 110.4° | 110.5° |
| O2' | CM2 | HM21 | 109.5° | 109.5° |
| O2' | CM2 | HM22 | 109.5° | 109.5° |
| O2' | CM2 | HM23 | 109.5° | 109.5° |
| O5' | C5' | C4' | 110.1° | 109.5° |
| O5' | C5' | H5' | 109.3° | 109.4° |
| O5' | C5' | H5'' | 109.3° | 109.5° |
| C5' | O5' | HO5' | 109.5° | 114.1° |
| O2 | C2 | N3 | 124.5° | 119.4° |
| O2 | C2 | N1 | 116.7° | 119.5° |
| C5' | C4' | O4' | 109.3° | 110.3° |
| C5' | C4' | H4' | 108.4° | 110.3° |
| C4' | C5' | H5' | 109.3° | 109.4° |
| C4' | C5' | H5'' | 109.3° | 109.5° |
| C4' | O4' | C1' | 108.7° | 105.3° |
| O4' | C4' | H4' | 109.1° | 110.4° |
| C2 | N3 | C4 | 121.1° | 120.7° |
| N3 | C2 | N1 | 118.8° | 121.1° |
| N3 | C4 | N4 | 118.9° | 120.2° |
| N3 | C4 | C5 | 120.6° | 119.6° |
| C2 | N1 | C1' | 115.7° | 119.8° |
| C2 | N1 | C6 | 120.4° | 120.4° |
| N4 | C4 | C5 | 120.3° | 120.2° |
| C4 | N4 | HN41 | 120.0° | 120.0° |
| C4 | N4 | HN42 | 120.0° | 120.0° |
| C4 | C5 | C6 | 117.7° | 119.0° |
| C4 | C5 | H1' | 121.1° | 120.5° |
| C1' | N1 | C6 | 124.0° | 119.8° |
| N1 | C1' | O4' | 108.6° | 110.4° |
| N1 | C1' | H1 | 108.5° | 110.4° |
| N1 | C6 | C5 | 121.2° | 119.2° |
| N1 | C6 | H2' | 119.4° | 120.4° |
| O4' | C1' | H1 | 109.5° | 110.4° |
| C6 | C5 | H1' | 121.1° | 120.5° |
| C5 | C6 | H2' | 119.4° | 120.4° |
| HN41 | N4 | HN42 | 120.0° | 120.0° |
| HM21 | CM2 | HM22 | 109.5° | 109.5° |
| HM21 | CM2 | HM23 | 109.5° | 109.4° |
| HM22 | CM2 | HM23 | 109.5° | 109.4° |
| H5' | C5' | H5'' | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3' | C3' | C2' | C4' | 119.1° | 118.6° |
| O3' | C3' | C2' | H3' | 125.9° | 122.7° |
| O3' | C3' | C4' | H3' | 123.6° | 122.7° |
| O3' | C3' | C2' | O2' | 45.0° | 0.0° |
| O3' | C3' | C2' | C1' | 161.1° | 118.6° |
| O3' | C3' | C4' | C5' | 78.4° | 98.6° |
| O3' | C3' | C4' | O4' | 160.5° | 142.6° |
| O3' | C3' | C2' | H2 | 82.3° | 122.7° |
| O3' | C3' | C4' | H4' | 44.1° | 23.7° |
| C2' | C3' | C4' | H3' | 115.1° | 118.6° |
| C3' | C2' | O2' | C1' | 111.1° | 114.6° |
| C3' | C2' | O2' | H2 | 126.4° | 122.8° |
| C3' | C2' | C1' | H2 | 116.7° | 118.8° |
| C3' | C2' | O2' | CM2 | 168.9° | 95.4° |
| C2' | C3' | C4' | C5' | 160.2° | 142.8° |
| C2' | C3' | C4' | O4' | 39.1° | 24.0° |
| C3' | C2' | C1' | N1 | 88.8° | 142.8° |
| C3' | C2' | C1' | O4' | 32.1° | 24.0° |
| C3' | C2' | C1' | H1 | 149.8° | 94.9° |
| C2' | C3' | C4' | H4' | 77.3° | 95.0° |
| C2' | C3' | O3' | HO3' | 180.0° | 180.0° |
| C4' | C3' | C2' | O2' | 74.1° | 118.6° |
| C4' | C3' | C2' | C1' | 42.0° | 0.0° |
| C3' | C4' | C5' | O5' | 51.8° | 175.0° |
| C3' | C4' | C5' | O4' | 118.8° | 115.4° |
| C3' | C4' | C5' | H4' | 122.3° | 122.3° |
| C3' | C4' | O4' | H4' | 115.7° | 118.9° |
| C3' | C4' | O4' | C1' | 20.1° | 40.5° |
| C4' | C3' | C2' | H2 | 158.6° | 118.7° |
| C4' | C3' | O3' | HO3' | 67.9° | 65.4° |
| C3' | C4' | C5' | H5' | 68.3° | 55.1° |
| C3' | C4' | C5' | H5'' | 171.8° | 65.0° |
| O2' | C2' | C1' | H2 | 123.5° | 122.6° |
| O2' | C2' | C1' | N1 | 151.4° | 98.6° |
| O2' | C2' | C1' | O4' | 87.7° | 142.6° |
| O2' | C2' | C1' | H1 | 30.0° | 23.7° |
| C2' | O2' | CM2 | HM21 | 180.0° | 180.0° |
| C2' | O2' | CM2 | HM22 | 60.0° | 60.0° |
| C2' | O2' | CM2 | HM23 | 60.0° | 60.0° |
| O2' | C2' | C3' | H3' | 170.8° | 122.7° |
| C1' | C2' | O2' | CM2 | 80.0° | 150.0° |
| C2' | C1' | O4' | C4' | 7.8° | 40.5° |
| C2' | C1' | N1 | C2 | 74.2° | 61.6° |
| C2' | C1' | N1 | O4' | 120.0° | 115.3° |
| C2' | C1' | N1 | H1 | 121.1° | 122.4° |
| C2' | C1' | N1 | C6 | 106.2° | 118.2° |
| C2' | C1' | O4' | H1 | 116.6° | 118.9° |
| C1' | C2' | C3' | H3' | 73.1° | 118.7° |
| CM2 | O2' | C2' | H2 | 42.5° | 27.4° |
| O2' | CM2 | HM21 | HM22 | 120.0° | 120.0° |
| O2' | CM2 | HM21 | HM23 | 120.0° | 120.0° |
| O2' | CM2 | HM22 | HM23 | 120.0° | 120.0° |
| O5' | C5' | C4' | H5' | 120.1° | 119.9° |
| O5' | C5' | C4' | H5'' | 120.1° | 120.0° |
| O5' | C5' | C4' | O4' | 67.0° | 69.6° |
| O5' | C5' | C4' | H4' | 174.1° | 52.7° |
| O5' | C5' | H5' | H5'' | 119.7° | 120.0° |
| O2 | C2 | N3 | N1 | 179.6° | 180.0° |
| O2 | C2 | N3 | C4 | 178.5° | 180.0° |
| O2 | C2 | N1 | C1' | 1.8° | 0.1° |
| O2 | C2 | N1 | C6 | 178.6° | 179.8° |
| C5' | C4' | O4' | H4' | 118.4° | 122.3° |
| C5' | C4' | O4' | C1' | 145.9° | 159.3° |
| C5' | C4' | C3' | H3' | 45.2° | 24.1° |
| C4' | C5' | H5' | H5'' | 119.7° | 120.0° |
| C4' | C5' | O5' | HO5' | 180.0° | 180.0° |
| C4' | O4' | C1' | N1 | 117.2° | 159.3° |
| C4' | O4' | C1' | H1 | 124.5° | 78.4° |
| O4' | C4' | C3' | H3' | 76.0° | 94.7° |
| O4' | C4' | C5' | H5' | 172.9° | 170.4° |
| O4' | C4' | C5' | H5'' | 53.0° | 50.4° |
| C2 | N3 | C4 | N4 | 178.4° | 180.0° |
| C2 | N3 | C4 | C5 | 2.5° | 0.0° |
| N3 | C2 | N1 | C1' | 177.8° | 180.0° |
| N3 | C2 | N1 | C6 | 1.8° | 0.2° |
| C4 | N3 | C2 | N1 | 2.0° | 0.0° |
| N3 | C4 | N4 | C5 | 176.0° | 179.9° |
| N3 | C4 | C5 | C6 | 2.7° | 0.2° |
| N3 | C4 | C5 | H1' | 177.3° | 180.0° |
| N3 | C4 | N4 | HN41 | 0.0° | 0.0° |
| N3 | C4 | N4 | HN42 | 180.0° | 180.0° |
| C2 | N1 | C1' | C6 | 179.6° | 179.8° |
| C2 | N1 | C1' | O4' | 165.8° | 53.7° |
| C2 | N1 | C6 | C5 | 2.2° | 0.4° |
| C2 | N1 | C6 | H2' | 177.9° | 179.8° |
| C2 | N1 | C1' | H1 | 46.9° | 176.0° |
| N4 | C4 | C5 | C6 | 178.6° | 179.8° |
| N4 | C4 | C5 | H1' | 1.4° | 0.0° |
| C4 | N4 | HN41 | HN42 | 180.0° | 180.0° |
| C4 | C5 | C6 | N1 | 2.6° | 0.4° |
| C4 | C5 | C6 | H1' | 180.0° | 179.8° |
| C4 | C5 | C6 | H2' | 177.5° | 179.8° |
| C5 | C4 | N4 | HN41 | 176.0° | 180.0° |
| C5 | C4 | N4 | HN42 | 4.0° | 0.0° |
| N1 | C1' | O4' | H1 | 118.3° | 122.3° |
| C1' | N1 | C6 | C5 | 177.4° | 179.8° |
| C1' | N1 | C6 | H2' | 2.6° | 0.0° |
| N1 | C1' | C2' | H2 | 27.9° | 24.0° |
| C6 | N1 | C1' | O4' | 13.8° | 126.4° |
| N1 | C6 | C5 | H2' | 180.0° | 179.8° |
| N1 | C6 | C5 | H1' | 177.5° | 179.8° |
| C6 | N1 | C1' | H1 | 132.7° | 4.2° |
| O4' | C1' | C2' | H2 | 148.8° | 94.8° |
| C1' | O4' | C4' | H4' | 95.6° | 78.4° |
| H1' | C5 | C6 | H2' | 2.5° | 0.0° |
| H1 | C1' | C2' | H2 | 93.5° | 146.4° |
| H2 | C2' | C3' | H3' | 43.5° | 0.0° |
| HM21 | CM2 | HM22 | HM23 | 120.0° | 119.9° |
| H3' | C3' | C4' | H4' | 167.6° | 146.4° |
| H3' | C3' | O3' | HO3' | 54.9° | 57.3° |
| H4' | C4' | C5' | H5' | 54.0° | 67.2° |
| H4' | C4' | C5' | H5'' | 65.9° | 172.7° |
| H5' | C5' | O5' | HO5' | 59.9° | 60.1° |
| H5'' | C5' | O5' | HO5' | 59.9° | 59.9° |
