UZ0
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O4 | C4 | doub | 1.22Å | 1.22Å | |
N3 | C4 | sing | 1.35Å | 1.36Å | |
N3 | C2 | sing | 1.35Å | 1.36Å | |
C4 | C5 | sing | 1.42Å | 1.41Å | |
O2 | C2 | doub | 1.21Å | 1.22Å | |
C2 | N1 | sing | 1.35Å | 1.36Å | |
C5 | C6 | doub | 1.35Å | 1.35Å | |
N1 | C6 | sing | 1.37Å | 1.38Å | |
N1 | C1' | sing | 1.47Å | 1.50Å | |
C1' | O4' | sing | 1.44Å | 1.46Å | |
C1' | C2' | sing | 1.54Å | 1.57Å | |
O4' | C4' | sing | 1.44Å | 1.46Å | |
C4' | C5' | sing | 1.53Å | 1.52Å | |
C4' | C3' | sing | 1.54Å | 1.54Å | |
C2' | N3' | sing | 1.46Å | 1.47Å | |
C2' | C3' | sing | 1.55Å | 1.55Å | |
N3' | N4' | doub | 1.12Å | 1.13Å | |
C5' | O5' | sing | 1.43Å | 1.44Å | |
C3' | O3' | sing | 1.43Å | 1.43Å | |
N4' | N5' | doub | 1.12Å | 1.13Å | |
N3 | H1 | sing | 0.97Å | 1.00Å | |
C5 | H2 | sing | 1.08Å | 1.08Å | |
C6 | H3 | sing | 1.08Å | 1.08Å | |
C1' | H4 | sing | 1.09Å | 1.10Å | |
C2' | H5 | sing | 1.09Å | 1.10Å | |
C3' | H6 | sing | 1.09Å | 1.10Å | |
O3' | H7 | sing | 0.97Å | 0.95Å | |
C4' | H8 | sing | 1.09Å | 1.10Å | |
C5' | H9 | sing | 1.09Å | 1.10Å | |
C5' | H10 | sing | 1.09Å | 1.10Å | |
O5' | H12 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O4 | C4 | N3 | 120.4° | 120.3° |
O4 | C4 | C5 | 121.3° | 120.4° |
C4 | N3 | C2 | 123.4° | 120.3° |
N3 | C4 | C5 | 118.3° | 119.4° |
C4 | N3 | H1 | 118.3° | 119.9° |
N3 | C2 | O2 | 117.0° | 119.6° |
N3 | C2 | N1 | 119.8° | 120.9° |
C2 | N3 | H1 | 118.3° | 119.8° |
C4 | C5 | C6 | 116.1° | 119.1° |
C4 | C5 | H2 | 121.9° | 120.4° |
O2 | C2 | N1 | 123.0° | 119.6° |
C2 | N1 | C6 | 116.1° | 120.7° |
C2 | N1 | C1' | 124.6° | 119.7° |
C5 | C6 | N1 | 126.2° | 119.7° |
C6 | C5 | H2 | 121.9° | 120.5° |
C5 | C6 | H3 | 116.9° | 120.1° |
C6 | N1 | C1' | 119.1° | 119.7° |
N1 | C6 | H3 | 116.9° | 120.2° |
N1 | C1' | O4' | 122.7° | 110.4° |
N1 | C1' | C2' | 120.3° | 110.4° |
N1 | C1' | H4 | 105.3° | 110.4° |
O4' | C1' | C2' | 96.2° | 104.8° |
C1' | O4' | C4' | 100.4° | 105.3° |
O4' | C1' | H4 | 105.8° | 110.3° |
C1' | C2' | N3' | 127.2° | 110.5° |
C1' | C2' | C3' | 106.2° | 104.0° |
C2' | C1' | H4 | 104.6° | 110.5° |
C1' | C2' | H5 | 96.5° | 110.5° |
O4' | C4' | C5' | 118.3° | 110.4° |
O4' | C4' | C3' | 106.6° | 104.8° |
O4' | C4' | H8 | 109.5° | 110.4° |
C5' | C4' | C3' | 104.8° | 110.4° |
C4' | C5' | O5' | 106.7° | 109.5° |
C5' | C4' | H8 | 108.7° | 110.4° |
C4' | C5' | H9 | 110.2° | 109.4° |
C4' | C5' | H10 | 110.2° | 109.4° |
C4' | C3' | C2' | 98.7° | 104.1° |
C4' | C3' | O3' | 110.1° | 110.5° |
C4' | C3' | H6 | 111.4° | 110.7° |
C3' | C4' | H8 | 108.5° | 110.4° |
N3' | C2' | C3' | 122.5° | 110.5° |
C2' | N3' | N4' | 124.3° | 120.0° |
N3' | C2' | H5 | 96.9° | 110.5° |
C2' | C3' | O3' | 111.4° | 110.5° |
C3' | C2' | H5 | 96.6° | 110.6° |
C2' | C3' | H6 | 111.2° | 110.5° |
N3' | N4' | N5' | 175.9° | 180.0° |
O5' | C5' | H9 | 110.2° | 109.5° |
O5' | C5' | H10 | 110.2° | 109.5° |
C5' | O5' | H12 | 109.5° | 114.0° |
O3' | C3' | H6 | 113.1° | 110.4° |
C3' | O3' | H7 | 109.5° | 114.0° |
H9 | C5' | H10 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O4 | C4 | N3 | C5 | 179.8° | 180.0° |
O4 | C4 | N3 | C2 | 179.8° | 180.0° |
O4 | C4 | C5 | C6 | 179.7° | 179.9° |
O4 | C4 | N3 | H1 | 0.2° | 0.0° |
O4 | C4 | C5 | H2 | 0.3° | 0.0° |
C4 | N3 | C2 | H1 | 180.0° | 180.0° |
C4 | N3 | C2 | O2 | 177.0° | 180.0° |
C4 | N3 | C2 | N1 | 1.6° | 0.0° |
N3 | C4 | C5 | C6 | 0.1° | 0.1° |
N3 | C4 | C5 | H2 | 179.9° | 180.0° |
C2 | N3 | C4 | C5 | 0.0° | 0.1° |
N3 | C2 | O2 | N1 | 175.3° | 180.0° |
N3 | C2 | N1 | C6 | 2.8° | 0.1° |
N3 | C2 | N1 | C1' | 177.7° | 179.7° |
C4 | C5 | C6 | H2 | 180.0° | 180.0° |
C4 | C5 | C6 | N1 | 1.4° | 0.0° |
C5 | C4 | N3 | H1 | 180.0° | 179.9° |
C4 | C5 | C6 | H3 | 178.6° | 179.7° |
O2 | C2 | N1 | C6 | 178.0° | 180.0° |
O2 | C2 | N1 | C1' | 7.2° | 0.3° |
O2 | C2 | N3 | H1 | 3.0° | 0.0° |
C2 | N1 | C6 | C5 | 2.9° | 0.0° |
C2 | N1 | C6 | C1' | 175.1° | 179.8° |
C2 | N1 | C1' | O4' | 57.1° | 53.8° |
C2 | N1 | C1' | C2' | 178.8° | 61.6° |
N1 | C2 | N3 | H1 | 178.5° | 180.0° |
C2 | N1 | C6 | H3 | 177.1° | 179.7° |
C2 | N1 | C1' | H4 | 63.6° | 176.0° |
C5 | C6 | N1 | H3 | 180.0° | 179.7° |
C5 | C6 | N1 | C1' | 178.0° | 179.7° |
C6 | N1 | C1' | O4' | 128.2° | 126.4° |
C6 | N1 | C1' | C2' | 6.5° | 118.2° |
N1 | C6 | C5 | H2 | 178.6° | 180.0° |
C6 | N1 | C1' | H4 | 111.1° | 4.2° |
N1 | C1' | O4' | C2' | 132.4° | 118.8° |
N1 | C1' | O4' | H4 | 120.5° | 122.2° |
N1 | C1' | C2' | H4 | 117.9° | 122.3° |
N1 | C1' | O4' | C4' | 173.3° | 159.3° |
N1 | C1' | C2' | N3' | 26.5° | 98.5° |
N1 | C1' | C2' | C3' | 176.1° | 142.8° |
C1' | N1 | C6 | H3 | 2.0° | 0.0° |
N1 | C1' | C2' | H5 | 77.2° | 24.1° |
O4' | C1' | C2' | H4 | 108.1° | 118.8° |
C1' | O4' | C4' | C5' | 167.8° | 159.3° |
C1' | O4' | C4' | C3' | 50.2° | 40.5° |
O4' | C1' | C2' | N3' | 160.4° | 142.6° |
O4' | C1' | C2' | C3' | 42.1° | 23.9° |
O4' | C1' | C2' | H5 | 56.7° | 94.8° |
C1' | O4' | C4' | H8 | 67.0° | 78.4° |
C2' | C1' | O4' | C4' | 54.3° | 40.5° |
C1' | C2' | C3' | C4' | 13.1° | 0.0° |
C1' | C2' | N3' | C3' | 154.1° | 114.6° |
C1' | C2' | N3' | H5 | 103.6° | 122.6° |
C1' | C2' | C3' | H5 | 98.7° | 118.7° |
C1' | C2' | N3' | N4' | 173.4° | 175.0° |
C1' | C2' | C3' | O3' | 102.5° | 118.7° |
C1' | C2' | C3' | H6 | 130.3° | 118.8° |
O4' | C4' | C5' | C3' | 118.5° | 115.4° |
O4' | C4' | C5' | H8 | 125.6° | 122.4° |
O4' | C4' | C3' | H8 | 117.9° | 118.9° |
O4' | C4' | C3' | C2' | 21.0° | 24.0° |
O4' | C4' | C5' | O5' | 174.7° | 69.6° |
O4' | C4' | C3' | O3' | 137.7° | 142.6° |
C4' | O4' | C1' | H4 | 52.8° | 78.4° |
O4' | C4' | C3' | H6 | 96.0° | 94.7° |
O4' | C4' | C5' | H9 | 55.1° | 170.4° |
O4' | C4' | C5' | H10 | 65.8° | 50.4° |
C5' | C4' | C3' | H8 | 116.0° | 122.3° |
C5' | C4' | C3' | C2' | 147.1° | 142.8° |
C4' | C5' | O5' | H9 | 119.6° | 120.0° |
C4' | C5' | O5' | H10 | 119.6° | 120.0° |
C5' | C4' | C3' | O3' | 96.2° | 98.5° |
C5' | C4' | C3' | H6 | 30.2° | 24.1° |
C4' | C5' | H9 | H10 | 121.3° | 120.0° |
C4' | C5' | O5' | H12 | 180.0° | 180.0° |
C4' | C3' | C2' | N3' | 171.9° | 118.6° |
C4' | C3' | C2' | O3' | 115.7° | 118.7° |
C4' | C3' | C2' | H6 | 117.1° | 118.9° |
C3' | C4' | C5' | O5' | 56.2° | 175.0° |
C4' | C3' | O3' | H6 | 125.4° | 122.8° |
C4' | C3' | C2' | H5 | 85.6° | 118.7° |
C4' | C3' | O3' | H7 | 180.0° | 65.3° |
C3' | C4' | C5' | H9 | 63.4° | 55.0° |
C3' | C4' | C5' | H10 | 175.7° | 65.0° |
N3' | C2' | C3' | H5 | 102.5° | 122.7° |
N3' | C2' | C3' | O3' | 56.2° | 0.0° |
C2' | N3' | N4' | N5' | 168.0° | 28.9° |
N3' | C2' | C1' | H4 | 91.4° | 23.8° |
N3' | C2' | C3' | H6 | 71.0° | 122.5° |
C3' | C2' | N3' | N4' | 19.3° | 70.4° |
C2' | C3' | O3' | H6 | 126.2° | 122.5° |
C3' | C2' | C1' | H4 | 66.0° | 94.9° |
C2' | C3' | O3' | H7 | 71.6° | 180.0° |
C2' | C3' | C4' | H8 | 96.9° | 94.9° |
N4' | N3' | C2' | H5 | 83.0° | 52.4° |
O5' | C5' | C4' | H8 | 59.7° | 52.8° |
O5' | C5' | H9 | H10 | 121.3° | 120.0° |
O3' | C3' | C2' | H5 | 158.7° | 122.6° |
O3' | C3' | C4' | H8 | 19.8° | 23.7° |
H2 | C5 | C6 | H3 | 1.4° | 0.3° |
H4 | C1' | C2' | H5 | 164.8° | 146.4° |
H5 | C2' | C3' | H6 | 31.5° | 0.1° |
H6 | C3' | O3' | H7 | 54.6° | 57.5° |
H6 | C3' | C4' | H8 | 146.2° | 146.4° |
H8 | C4' | C5' | H9 | 179.3° | 67.3° |
H8 | C4' | C5' | H10 | 59.8° | 172.7° |
H9 | C5' | O5' | H12 | 60.4° | 60.0° |
H10 | C5' | O5' | H12 | 60.4° | 60.0° |