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Summary Geometry Related PDB entries

UVV

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O	C5	doub	1.22Å	1.22Å
N	C4	sing	1.40Å	1.38Å
C5	C4	sing	1.41Å	1.48Å
C5	N1	sing	1.35Å	1.39Å
C6	N1	sing	1.46Å	1.49Å
C4	C3	doub	1.37Å	1.37Å
N1	C1	sing	1.36Å	1.42Å
C3	C2	sing	1.40Å	1.41Å
C1	C2	doub	1.35Å	1.36Å
C1	C	sing	1.51Å	1.48Å
C6	H1	sing	1.09Å	1.10Å
C6	H2	sing	1.09Å	1.10Å
C6	H3	sing	1.09Å	1.10Å
N	H4	sing	0.97Å	1.00Å
N	H5	sing	0.97Å	1.00Å
C	H6	sing	1.09Å	1.10Å
C	H7	sing	1.09Å	1.10Å
C	H8	sing	1.09Å	1.10Å
C2	H9	sing	1.08Å	1.08Å
C3	H10	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O	C5	C4	122.7°	120.1°
O	C5	N1	119.0°	120.0°
N	C4	C5	115.9°	120.4°
N	C4	C3	123.2°	120.4°
C4	N	H4	109.5°	120.0°
C4	N	H5	109.5°	120.0°
C4	C5	N1	118.3°	119.9°
C5	C4	C3	120.7°	119.2°
C5	N1	C6	116.4°	119.6°
C5	N1	C1	119.5°	120.8°
C6	N1	C1	124.1°	119.6°
N1	C6	H1	109.5°	109.5°
N1	C6	H2	109.5°	109.5°
N1	C6	H3	109.5°	109.5°
C4	C3	C2	118.6°	119.3°
C4	C3	H10	120.7°	120.4°
N1	C1	C2	120.7°	120.9°
N1	C1	C	120.8°	119.6°
C3	C2	C1	122.0°	120.0°
C3	C2	H9	119.0°	120.0°
C2	C3	H10	120.7°	120.4°
C2	C1	C	118.4°	119.6°
C1	C2	H9	119.0°	120.0°
C1	C	H6	109.5°	109.5°
C1	C	H7	109.5°	109.5°
C1	C	H8	109.4°	109.5°
H1	C6	H2	109.4°	109.4°
H1	C6	H3	109.5°	109.4°
H2	C6	H3	109.5°	109.4°
H4	N	H5	109.5°	120.0°
H6	C	H7	109.5°	109.5°
H6	C	H8	109.5°	109.5°
H7	C	H8	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O	C5	C4	N	9.0°	0.1°
O	C5	C4	N1	179.1°	180.0°
O	C5	N1	C6	2.8°	0.3°
O	C5	C4	C3	176.1°	180.0°
O	C5	N1	C1	177.3°	180.0°
N	C4	C5	C3	174.9°	179.9°
N	C4	C5	N1	171.9°	179.9°
N	C4	C3	C2	172.4°	180.0°
C4	N	H4	H5	120.0°	180.0°
N	C4	C3	H10	7.5°	0.1°
C4	C5	N1	C6	178.1°	179.7°
C4	C5	N1	C1	1.9°	0.0°
C5	C4	C3	C2	2.1°	0.1°
C5	C4	N	H4	180.0°	179.9°
C5	C4	N	H5	60.0°	0.1°
C5	C4	C3	H10	177.9°	180.0°
C5	N1	C6	C1	179.9°	179.7°
N1	C5	C4	C3	3.0°	0.0°
C5	N1	C1	C2	0.2°	0.0°
C5	N1	C1	C	178.3°	179.9°
C5	N1	C6	H1	180.0°	90.3°
C5	N1	C6	H2	60.0°	29.7°
C5	N1	C6	H3	60.0°	149.7°
C6	N1	C1	C2	179.9°	179.7°
C6	N1	C1	C	1.8°	0.3°
N1	C6	H1	H2	120.0°	120.0°
N1	C6	H1	H3	120.0°	120.0°
N1	C6	H2	H3	120.0°	120.1°
C4	C3	C2	H10	180.0°	179.9°
C4	C3	C2	C1	0.0°	0.1°
C3	C4	N	H4	5.2°	0.0°
C3	C4	N	H5	125.3°	180.0°
C4	C3	C2	H9	180.0°	180.0°
N1	C1	C2	C3	1.2°	0.1°
N1	C1	C2	C	178.2°	180.0°
C1	N1	C6	H1	0.1°	90.0°
C1	N1	C6	H2	119.9°	150.0°
C1	N1	C6	H3	120.1°	30.0°
N1	C1	C	H6	180.0°	90.0°
N1	C1	C	H7	60.0°	150.0°
N1	C1	C	H8	60.0°	30.0°
N1	C1	C2	H9	178.8°	180.0°
C3	C2	C1	H9	180.0°	179.9°
C3	C2	C1	C	179.4°	180.0°
C2	C1	C	H6	1.8°	90.0°
C2	C1	C	H7	121.8°	30.0°
C2	C1	C	H8	118.2°	150.0°
C1	C2	C3	H10	180.0°	180.0°
C1	C	H6	H7	120.0°	120.0°
C1	C	H6	H8	120.0°	120.0°
C1	C	H7	H8	120.0°	120.0°
C	C1	C2	H9	0.6°	0.1°
H1	C6	H2	H3	120.0°	119.9°
H6	C	H7	H8	120.0°	120.0°
H9	C2	C3	H10	0.0°	0.1°

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