UVP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OP | P | doub | 1.48Å | 1.60Å | |
| OP1 | P | sing | 1.61Å | 1.60Å | |
| P | OP2 | sing | 1.61Å | 1.47Å | |
| P | C6' | sing | 1.81Å | 1.81Å | |
| C5' | C6' | doub | 1.31Å | 1.53Å | |
| C5' | C4' | sing | 1.51Å | 1.53Å | |
| C3' | O3' | sing | 1.43Å | 1.44Å | |
| C3' | C4' | sing | 1.54Å | 1.53Å | |
| C3' | C2' | sing | 1.55Å | 1.53Å | |
| C4' | O4' | sing | 1.44Å | 1.43Å | |
| C2' | O2' | sing | 1.43Å | 1.45Å | |
| C2' | C1' | sing | 1.55Å | 1.51Å | |
| O2' | CB' | sing | 1.43Å | 1.43Å | |
| O4' | C1' | sing | 1.44Å | 1.42Å | |
| C1' | N1 | sing | 1.47Å | 1.47Å | |
| C6 | N1 | doub | 1.32Å | 1.40Å | Aromatic |
| C6 | C5 | sing | 1.38Å | 1.39Å | Aromatic |
| N1 | C2 | sing | 1.32Å | 1.34Å | Aromatic |
| C5 | C4 | doub | 1.39Å | 1.38Å | Aromatic |
| C2 | O2 | sing | 1.35Å | 1.23Å | |
| C2 | N3 | doub | 1.32Å | 1.40Å | Aromatic |
| C4 | N3 | sing | 1.33Å | 1.40Å | Aromatic |
| C4 | O4 | sing | 1.36Å | 1.23Å | |
| OP1 | H1 | sing | 0.97Å | 0.95Å | |
| OP2 | H2 | sing | 0.97Å | 0.95Å | |
| C6' | H3 | sing | 1.08Å | 1.08Å | |
| C5' | H5 | sing | 1.08Å | 1.08Å | |
| C4' | H7 | sing | 1.09Å | 1.10Å | |
| C3' | H8 | sing | 1.09Å | 1.10Å | |
| O3' | H9 | sing | 0.97Å | 0.95Å | |
| C2' | H10 | sing | 1.09Å | 1.10Å | |
| CB' | H11 | sing | 1.09Å | 1.10Å | |
| CB' | H12 | sing | 1.09Å | 1.10Å | |
| CB' | H13 | sing | 1.09Å | 1.10Å | |
| C1' | H14 | sing | 1.09Å | 1.10Å | |
| C5 | H16 | sing | 1.08Å | 1.08Å | |
| C6 | H17 | sing | 1.08Å | 1.08Å | |
| O2 | H4 | sing | 0.97Å | 0.95Å | |
| O4 | H6 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP | P | OP1 | 102.7° | 109.5° |
| OP | P | OP2 | 107.9° | 109.5° |
| OP | P | C6' | 109.5° | 109.5° |
| OP1 | P | OP2 | 108.1° | 109.5° |
| OP1 | P | C6' | 108.3° | 109.5° |
| P | OP1 | H1 | 109.5° | 114.0° |
| OP2 | P | C6' | 119.1° | 109.5° |
| P | OP2 | H2 | 109.5° | 114.0° |
| P | C6' | C5' | 115.4° | 120.0° |
| P | C6' | H3 | 122.3° | 120.0° |
| C6' | C5' | C4' | 114.8° | 120.0° |
| C5' | C6' | H3 | 122.3° | 120.0° |
| C6' | C5' | H5 | 122.6° | 120.0° |
| C5' | C4' | C3' | 110.7° | 109.9° |
| C5' | C4' | O4' | 109.3° | 109.9° |
| C4' | C5' | H5 | 122.6° | 120.0° |
| C5' | C4' | H7 | 110.3° | 109.8° |
| O3' | C3' | C4' | 108.6° | 110.5° |
| O3' | C3' | C2' | 111.9° | 110.5° |
| O3' | C3' | H8 | 112.6° | 110.4° |
| C3' | O3' | H9 | 109.5° | 114.0° |
| C4' | C3' | C2' | 100.8° | 104.2° |
| C3' | C4' | O4' | 104.1° | 107.3° |
| C3' | C4' | H7 | 110.3° | 110.0° |
| C4' | C3' | H8 | 111.1° | 110.5° |
| C3' | C2' | O2' | 112.1° | 110.9° |
| C3' | C2' | C1' | 102.4° | 102.1° |
| C2' | C3' | H8 | 111.2° | 110.6° |
| C3' | C2' | H10 | 109.4° | 110.9° |
| C4' | O4' | C1' | 100.7° | 106.9° |
| O4' | C4' | H7 | 111.8° | 109.9° |
| O2' | C2' | C1' | 112.6° | 110.9° |
| C2' | O2' | CB' | 110.5° | 114.0° |
| O2' | C2' | H10 | 110.5° | 110.8° |
| C2' | C1' | O4' | 97.4° | 103.5° |
| C2' | C1' | N1 | 111.2° | 110.6° |
| C1' | C2' | H10 | 109.6° | 110.9° |
| C2' | C1' | H14 | 113.0° | 110.7° |
| O2' | CB' | H11 | 109.5° | 109.5° |
| O2' | CB' | H12 | 109.4° | 109.5° |
| O2' | CB' | H13 | 109.4° | 109.5° |
| O4' | C1' | N1 | 105.9° | 110.6° |
| O4' | C1' | H14 | 114.5° | 110.6° |
| C1' | N1 | C6 | 118.1° | 119.6° |
| C1' | N1 | C2 | 121.8° | 119.5° |
| N1 | C1' | H14 | 113.5° | 110.7° |
| N1 | C6 | C5 | 121.1° | 119.2° |
| C6 | N1 | C2 | 120.2° | 120.9° |
| N1 | C6 | H17 | 119.4° | 120.4° |
| C6 | C5 | C4 | 119.0° | 118.4° |
| C6 | C5 | H16 | 120.5° | 120.7° |
| C5 | C6 | H17 | 119.5° | 120.4° |
| N1 | C2 | O2 | 120.1° | 119.2° |
| N1 | C2 | N3 | 119.7° | 121.6° |
| C5 | C4 | N3 | 119.4° | 119.1° |
| C5 | C4 | O4 | 119.7° | 120.4° |
| C4 | C5 | H16 | 120.5° | 120.8° |
| O2 | C2 | N3 | 120.1° | 119.2° |
| C2 | O2 | H4 | 109.5° | 114.0° |
| C2 | N3 | C4 | 120.6° | 120.6° |
| N3 | C4 | O4 | 120.9° | 120.5° |
| C4 | O4 | H6 | 109.5° | 114.0° |
| H11 | CB' | H12 | 109.5° | 109.5° |
| H11 | CB' | H13 | 109.5° | 109.4° |
| H12 | CB' | H13 | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP | P | OP1 | OP2 | 113.9° | 120.0° |
| OP | P | OP1 | C6' | 115.8° | 120.0° |
| OP | P | OP2 | C6' | 125.5° | 120.0° |
| OP | P | C6' | C5' | 78.8° | 120.0° |
| OP | P | OP1 | H1 | 0.0° | 59.9° |
| OP | P | OP2 | H2 | 0.0° | 180.0° |
| OP | P | C6' | H3 | 101.2° | 60.0° |
| OP1 | P | OP2 | C6' | 124.1° | 120.0° |
| OP1 | P | C6' | C5' | 32.6° | 120.0° |
| OP1 | P | OP2 | H2 | 110.4° | 60.0° |
| OP1 | P | C6' | H3 | 147.5° | 60.0° |
| OP2 | P | C6' | C5' | 156.5° | 0.0° |
| OP2 | P | OP1 | H1 | 113.9° | 60.1° |
| OP2 | P | C6' | H3 | 23.5° | 180.0° |
| P | C6' | C5' | H3 | 180.0° | 179.9° |
| P | C6' | C5' | C4' | 179.6° | 180.0° |
| C6' | P | OP1 | H1 | 115.8° | 179.9° |
| C6' | P | OP2 | H2 | 125.5° | 60.0° |
| P | C6' | C5' | H5 | 0.4° | 0.1° |
| C6' | C5' | C4' | H5 | 180.0° | 179.9° |
| C6' | C5' | C4' | C3' | 150.8° | 124.3° |
| C6' | C5' | C4' | O4' | 95.1° | 6.4° |
| C6' | C5' | C4' | H7 | 28.4° | 114.6° |
| C5' | C4' | C3' | O3' | 109.4° | 119.8° |
| C5' | C4' | C3' | O4' | 117.4° | 119.5° |
| C5' | C4' | C3' | H7 | 122.5° | 121.0° |
| C5' | C4' | C3' | C2' | 132.8° | 121.5° |
| C5' | C4' | O4' | H7 | 122.5° | 121.0° |
| C5' | C4' | O4' | C1' | 165.4° | 146.0° |
| C4' | C5' | C6' | H3 | 0.5° | 0.1° |
| C5' | C4' | C3' | H8 | 14.9° | 2.7° |
| O3' | C3' | C4' | C2' | 117.7° | 118.7° |
| O3' | C3' | C4' | H8 | 124.4° | 122.5° |
| O3' | C3' | C2' | H8 | 126.9° | 122.6° |
| O3' | C3' | C4' | O4' | 133.1° | 120.7° |
| O3' | C3' | C2' | O2' | 24.9° | 20.4° |
| O3' | C3' | C2' | C1' | 96.1° | 97.8° |
| O3' | C3' | C4' | H7 | 13.0° | 1.2° |
| O3' | C3' | C2' | H10 | 147.8° | 144.0° |
| C4' | C3' | C2' | H8 | 117.8° | 118.7° |
| C3' | C4' | O4' | H7 | 119.1° | 119.6° |
| C4' | C3' | C2' | O2' | 140.2° | 139.1° |
| C4' | C3' | C2' | C1' | 19.2° | 20.9° |
| C3' | C4' | O4' | C1' | 47.0° | 26.5° |
| C3' | C4' | C5' | H5 | 29.2° | 55.6° |
| C4' | C3' | O3' | H9 | 180.0° | 61.4° |
| C4' | C3' | C2' | H10 | 96.9° | 97.3° |
| C2' | C3' | C4' | O4' | 15.4° | 2.0° |
| C3' | C2' | O2' | C1' | 114.8° | 112.7° |
| C3' | C2' | O2' | H10 | 122.3° | 123.6° |
| C3' | C2' | C1' | H10 | 116.0° | 118.2° |
| C3' | C2' | O2' | CB' | 142.3° | 91.5° |
| C3' | C2' | C1' | O4' | 47.5° | 37.1° |
| C3' | C2' | C1' | N1 | 157.8° | 155.5° |
| C2' | C3' | C4' | H7 | 104.7° | 117.5° |
| C2' | C3' | O3' | H9 | 69.6° | 176.2° |
| C3' | C2' | C1' | H14 | 73.1° | 81.5° |
| C4' | O4' | C1' | C2' | 58.4° | 40.1° |
| C4' | O4' | C1' | N1 | 173.0° | 158.5° |
| O4' | C4' | C5' | H5 | 85.0° | 173.5° |
| O4' | C4' | C3' | H8 | 102.5° | 116.8° |
| C4' | O4' | C1' | H14 | 61.1° | 78.5° |
| O2' | C2' | C1' | H10 | 123.4° | 123.6° |
| O2' | C2' | C1' | O4' | 168.1° | 155.2° |
| O2' | C2' | C1' | N1 | 81.6° | 86.4° |
| O2' | C2' | C3' | H8 | 102.0° | 102.2° |
| C2' | O2' | CB' | H11 | 180.0° | 60.0° |
| C2' | O2' | CB' | H12 | 60.0° | 60.1° |
| C2' | O2' | CB' | H13 | 60.0° | 180.0° |
| O2' | C2' | C1' | H14 | 47.5° | 36.7° |
| C1' | C2' | O2' | CB' | 102.9° | 155.8° |
| C2' | C1' | O4' | N1 | 114.6° | 118.4° |
| C2' | C1' | O4' | H14 | 119.5° | 118.6° |
| C2' | C1' | N1 | H14 | 128.7° | 123.0° |
| C2' | C1' | N1 | C6 | 85.5° | 90.8° |
| C2' | C1' | N1 | C2 | 93.7° | 89.5° |
| C1' | C2' | C3' | H8 | 137.0° | 139.6° |
| CB' | O2' | C2' | H10 | 20.0° | 32.2° |
| O2' | CB' | H11 | H12 | 120.0° | 120.0° |
| O2' | CB' | H11 | H13 | 120.0° | 120.0° |
| O2' | CB' | H12 | H13 | 120.0° | 120.0° |
| O4' | C1' | N1 | H14 | 126.5° | 123.0° |
| O4' | C1' | N1 | C6 | 19.2° | 23.3° |
| O4' | C1' | N1 | C2 | 161.5° | 156.5° |
| C1' | O4' | C4' | H7 | 72.1° | 93.1° |
| O4' | C1' | C2' | H10 | 68.5° | 81.1° |
| C1' | N1 | C6 | C2 | 179.2° | 179.7° |
| C1' | N1 | C6 | C5 | 179.7° | 179.8° |
| C1' | N1 | C2 | O2 | 0.6° | 0.0° |
| C1' | N1 | C2 | N3 | 179.6° | 180.0° |
| N1 | C1' | C2' | H10 | 41.8° | 37.3° |
| C1' | N1 | C6 | H17 | 0.4° | 0.0° |
| N1 | C6 | C5 | H17 | 180.0° | 179.8° |
| N1 | C6 | C5 | C4 | 0.2° | 0.5° |
| C6 | N1 | C2 | O2 | 179.8° | 179.7° |
| C6 | N1 | C2 | N3 | 0.4° | 0.2° |
| C6 | N1 | C1' | H14 | 145.7° | 146.2° |
| N1 | C6 | C5 | H16 | 179.8° | 179.7° |
| C5 | C6 | N1 | C2 | 0.4° | 0.5° |
| C6 | C5 | C4 | H16 | 180.0° | 179.8° |
| C6 | C5 | C4 | N3 | 0.0° | 0.3° |
| C6 | C5 | C4 | O4 | 180.0° | 179.8° |
| N1 | C2 | O2 | N3 | 179.7° | 179.9° |
| N1 | C2 | N3 | C4 | 0.2° | 0.0° |
| C2 | N1 | C1' | H14 | 35.0° | 33.5° |
| C2 | N1 | C6 | H17 | 179.6° | 179.7° |
| N1 | C2 | O2 | H4 | 179.7° | 89.9° |
| C5 | C4 | N3 | C2 | 0.0° | 0.1° |
| C5 | C4 | N3 | O4 | 180.0° | 179.9° |
| C4 | C5 | C6 | H17 | 179.8° | 179.7° |
| C5 | C4 | O4 | H6 | 180.0° | 90.0° |
| O2 | C2 | N3 | C4 | 180.0° | 179.9° |
| C2 | N3 | C4 | O4 | 180.0° | 180.0° |
| N3 | C2 | O2 | H4 | 0.0° | 90.0° |
| N3 | C4 | C5 | H16 | 180.0° | 179.9° |
| N3 | C4 | O4 | H6 | 0.0° | 90.1° |
| O4 | C4 | C5 | H16 | 0.1° | 0.0° |
| H3 | C6' | C5' | H5 | 179.5° | 180.0° |
| H5 | C5' | C4' | H7 | 151.6° | 65.5° |
| H7 | C4' | C3' | H8 | 137.4° | 123.7° |
| H8 | C3' | O3' | H9 | 56.5° | 61.1° |
| H8 | C3' | C2' | H10 | 20.9° | 21.4° |
| H10 | C2' | C1' | H14 | 170.9° | 160.3° |
| H11 | CB' | H12 | H13 | 120.0° | 120.0° |
| H16 | C5 | C6 | H17 | 0.2° | 0.1° |
