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UVA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C4C5doub1.38Å1.37ÅAromatic
C4C3sing1.38Å1.44ÅAromatic
C5C6sing1.38Å1.44ÅAromatic
OSdoub1.42Å1.44Å
C3C2doub1.38Å1.36ÅAromatic
C6Ssing1.76Å1.65Å
C6C1doub1.39Å1.43ÅAromatic
SO1doub1.42Å1.44Å
SC7sing1.81Å1.66Å
C2C1sing1.39Å1.44ÅAromatic
C1Nsing1.40Å1.38Å
NCsing1.46Å1.49Å
C4H1sing1.08Å1.08Å
C5H2sing1.08Å1.08Å
C7H3sing1.09Å1.10Å
C7H4sing1.09Å1.10Å
C7H5sing1.09Å1.10Å
NH6sing0.97Å1.00Å
CH7sing1.09Å1.10Å
CH8sing1.09Å1.10Å
CH9sing1.09Å1.10Å
C2H10sing1.08Å1.08Å
C3H11sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5C4C3118.0°120.2°
C4C5C6123.3°120.0°
C5C4H1121.0°119.9°
C4C5H2118.4°120.0°
C4C3C2121.5°120.1°
C3C4H1121.0°119.9°
C4C3H11119.2°119.9°
C5C6S116.6°120.0°
C5C6C1116.8°120.0°
C6C5H2118.4°120.0°
OSC6108.6°104.3°
OSO1118.3°121.0°
OSC7105.8°110.5°
C3C2C1120.3°120.0°
C3C2H10119.9°120.0°
C2C3H11119.2°120.0°
SC6C1126.5°120.0°
C6SO1111.5°104.3°
C6SC7104.5°104.4°
C6C1C2120.0°119.8°
C6C1N120.1°120.1°
O1SC7107.1°110.5°
SC7H3109.5°109.5°
SC7H4109.5°109.5°
SC7H5109.5°109.5°
C2C1N119.8°120.1°
C1C2H10119.8°120.0°
C1NC123.5°120.0°
C1NH6105.9°119.9°
CNH6105.8°120.0°
NCH7109.5°109.5°
NCH8109.5°109.5°
NCH9109.5°109.5°
H3C7H4109.5°109.5°
H3C7H5109.5°109.5°
H4C7H5109.5°109.4°
H7CH8109.4°109.4°
H7CH9109.5°109.4°
H8CH9109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5C4C3H1180.0°179.7°
C4C5C6H2180.0°180.0°
C5C4C3C21.5°0.0°
C4C5C6S174.3°180.0°
C4C5C6C11.5°0.0°
C5C4C3H11178.6°180.0°
C3C4C5C60.3°0.0°
C4C3C2H11180.0°179.9°
C4C3C2C11.9°0.1°
C3C4C5H2179.7°180.0°
C4C3C2H10178.1°180.0°
C5C6SO1.4°128.9°
C5C6SC1175.4°180.0°
C5C6SO1133.5°1.1°
C5C6SC7111.2°115.0°
C5C6C1C21.0°0.0°
C5C6C1N178.7°180.0°
C6C5C4H1179.7°179.7°
OSC6O1132.1°127.8°
OSC6C7112.6°116.1°
OSC6C1174.0°51.1°
OSO1C7119.3°131.5°
OSC7H3180.0°51.6°
OSC7H460.0°68.4°
OSC7H560.0°171.7°
C3C2C1C60.7°0.1°
C3C2C1H10180.0°179.9°
C3C2C1N177.1°180.0°
C2C3C4H1178.6°179.7°
C6SO1C7113.7°111.7°
SC6C1C2174.3°180.0°
SC6C1N3.4°0.1°
SC6C5H25.7°0.0°
C6SC7H365.5°60.0°
C6SC7H454.5°180.0°
C6SC7H5174.5°60.0°
C1C6SO141.9°178.9°
C1C6SC773.4°65.0°
C6C1C2N177.7°179.9°
C6C1NC175.9°180.0°
C1C6C5H2178.5°180.0°
C6C1NH662.2°0.0°
C6C1C2H10179.3°180.0°
O1SC7H352.9°171.6°
O1SC7H4172.9°68.3°
O1SC7H567.1°51.6°
SC7H3H4120.0°120.0°
SC7H3H5120.0°120.0°
SC7H4H5120.0°120.0°
C2C1NC1.9°0.0°
C2C1NH6120.0°180.0°
C1C2C3H11178.1°180.0°
C1NCH6121.9°180.0°
C1NCH7180.0°60.0°
C1NCH860.0°60.0°
C1NCH960.0°180.0°
NC1C2H102.9°0.1°
NCH7H8120.0°120.0°
NCH7H9120.0°120.0°
NCH8H9120.0°120.0°
H1C4C5H20.4°0.3°
H1C4C3H111.4°0.2°
H3C7H4H5120.0°120.0°
H6NCH758.1°120.0°
H6NCH8178.1°120.0°
H6NCH961.9°0.0°
H7CH8H9120.0°120.0°
H10C2C3H111.9°0.1°

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PDB entries from 2024-07-17

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