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USJ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C4C3doub1.38Å1.39ÅAromatic
C4C5sing1.38Å1.40ÅAromatic
C3C2sing1.38Å1.38ÅAromatic
C5C6doub1.38Å1.39ÅAromatic
C2C1sing1.51Å1.47Å
C2C7doub1.38Å1.35ÅAromatic
C1O1sing1.43Å1.42Å
C1Nsing1.48Å1.48Å
C7C6sing1.38Å1.38ÅAromatic
C7C8sing1.51Å1.46Å
OC8sing1.43Å1.42Å
CNsing1.47Å1.47Å
NC8sing1.48Å1.49Å
C4H1sing1.08Å1.08Å
C5H2sing1.08Å1.08Å
C6H3sing1.08Å1.08Å
C8H4sing1.09Å1.10Å
O1H5sing0.97Å0.95Å
C1H6sing1.09Å1.10Å
CH8sing1.09Å1.10Å
CH9sing1.09Å1.10Å
CH10sing1.09Å1.10Å
OH11sing0.97Å0.95Å
C3H12sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C3C4C5120.7°120.0°
C4C3C2117.6°120.0°
C3C4H1119.6°120.0°
C4C3H12121.2°120.0°
C4C5C6120.5°120.0°
C5C4H1119.7°120.0°
C4C5H2119.7°120.0°
C3C2C1127.7°131.8°
C3C2C7121.6°120.0°
C2C3H12121.2°120.0°
C5C6C7117.5°120.1°
C6C5H2119.7°120.1°
C5C6H3121.2°120.0°
C1C2C7110.6°108.2°
C2C1O1111.9°110.2°
C2C1N103.0°105.7°
C2C1H6109.3°110.3°
C2C7C6122.0°119.9°
C2C7C8111.3°108.3°
O1C1N113.2°110.2°
C1O1H5109.5°114.0°
O1C1H6110.0°110.2°
C1NC111.7°111.0°
C1NC8108.0°103.9°
NC1H6109.2°110.2°
C6C7C8126.7°131.8°
C7C6H3121.2°119.9°
C7C8O108.2°110.2°
C7C8N103.0°105.7°
C7C8H4109.9°110.1°
OC8N115.3°110.3°
OC8H4110.5°110.1°
C8OH11109.5°114.0°
CNC8114.3°111.0°
NCH8109.5°109.4°
NCH9109.5°109.5°
NCH10109.5°109.5°
NC8H4109.6°110.2°
H8CH9109.5°109.5°
H8CH10109.5°109.5°
H9CH10109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C3C4C5H1180.0°179.7°
C4C3C2H12180.0°180.0°
C3C4C5C60.2°0.1°
C4C3C2C1179.0°180.0°
C4C3C2C70.5°0.0°
C3C4C5H2179.8°180.0°
C5C4C3C20.3°0.0°
C4C5C6H2180.0°179.9°
C4C5C6C70.2°0.1°
C4C5C6H3179.8°179.9°
C5C4C3H12179.7°180.0°
C3C2C1C7178.7°179.9°
C3C2C1O146.0°78.5°
C3C2C1N167.9°162.4°
C3C2C7C60.5°0.0°
C3C2C7C8179.8°179.9°
C2C3C4H1179.6°179.7°
C3C2C1H676.2°43.3°
C5C6C7C20.3°0.1°
C5C6C7H3180.0°180.0°
C5C6C7C8179.5°179.9°
C6C5C4H1179.8°179.7°
C2C1O1N115.8°116.2°
C2C1O1H6121.7°121.9°
C2C1NH6116.1°119.1°
C1C2C7C6179.3°180.0°
C1C2C7C81.4°0.0°
C2C1NC146.7°91.8°
C2C1NC820.2°27.6°
C2C1O1H5180.0°63.8°
C1C2C3H121.0°0.1°
C7C2C1O1135.3°101.5°
C7C2C1N13.4°17.5°
C2C7C6C8179.2°179.9°
C2C7C8O111.3°136.6°
C2C7C8N11.2°17.4°
C2C7C6H3179.7°180.0°
C2C7C8H4127.9°101.6°
C7C2C1H6102.5°136.6°
C7C2C3H12179.5°180.0°
O1C1NH6122.9°121.8°
O1C1NC92.2°149.2°
O1C1NC8141.3°91.5°
C1NC8C719.5°27.6°
C1NC8O98.1°146.7°
C1NCC8122.9°115.0°
C1NC8H4136.4°91.4°
NC1O1H564.2°180.0°
C1NCH8180.0°60.0°
C1NCH960.0°180.0°
C1NCH1060.0°60.0°
C6C7C8O69.4°43.3°
C6C7C8N168.1°162.4°
C7C6C5H2179.8°180.0°
C6C7C8H451.4°78.5°
C7C8ON114.6°116.4°
C7C8OH4120.4°121.7°
C7C8NC144.4°91.8°
C7C8NH4116.9°119.0°
C8C7C6H30.5°0.1°
C7C8OH11180.0°61.4°
OC8NC26.8°27.3°
OC8NH4125.5°121.9°
CNC8H498.7°149.2°
CNC1H630.7°27.4°
NCH8H9120.0°120.0°
NCH8H10120.0°120.0°
NCH9H10120.0°120.0°
C8NC1H695.8°146.7°
C8NCH857.1°55.0°
C8NCH9177.1°65.0°
C8NCH1062.9°175.0°
NC8OH1165.4°177.8°
H1C4C5H20.2°0.4°
H1C4C3H120.4°0.3°
H2C5C6H30.2°0.0°
H4C8OH1159.6°60.3°
H5O1C1H658.3°58.1°
H8CH9H10120.0°120.0°

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PDB entries from 2024-07-17

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