URV
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.47Å | |
CB | CG1 | sing | 1.53Å | 1.53Å | |
CB | CA | sing | 1.53Å | 1.53Å | |
CB | CG2 | sing | 1.53Å | 1.53Å | |
CA | C2 | sing | 1.53Å | 1.54Å | |
C2 | N2 | sing | 1.47Å | 1.48Å | |
N2 | C | sing | 1.35Å | 1.34Å | |
C | O | doub | 1.22Å | 1.23Å | |
C | OXT | sing | 1.35Å | 1.34Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | H1 | sing | 1.09Å | 1.10Å | |
CG1 | H3 | sing | 1.09Å | 1.10Å | |
CG1 | H4 | sing | 1.09Å | 1.10Å | |
CG1 | H5 | sing | 1.09Å | 1.10Å | |
CG2 | H6 | sing | 1.09Å | 1.10Å | |
CG2 | H7 | sing | 1.09Å | 1.10Å | |
CG2 | H8 | sing | 1.09Å | 1.10Å | |
C2 | H9 | sing | 1.09Å | 1.10Å | |
C2 | H10 | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
N2 | H14 | sing | 0.97Å | 1.00Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | CB | 112.9° | 109.5° |
N | CA | C2 | 109.9° | 109.4° |
N | CA | HA | 108.4° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
CG1 | CB | CA | 108.6° | 109.4° |
CG1 | CB | CG2 | 108.8° | 109.5° |
CG1 | CB | H1 | 110.1° | 109.5° |
CB | CG1 | H3 | 109.5° | 109.4° |
CB | CG1 | H4 | 109.4° | 109.4° |
CB | CG1 | H5 | 109.5° | 109.4° |
CA | CB | CG2 | 109.2° | 109.5° |
CB | CA | C2 | 110.2° | 109.4° |
CB | CA | HA | 107.7° | 109.5° |
CA | CB | H1 | 110.1° | 109.5° |
CG2 | CB | H1 | 110.1° | 109.5° |
CB | CG2 | H6 | 109.5° | 109.5° |
CB | CG2 | H7 | 109.5° | 109.5° |
CB | CG2 | H8 | 109.5° | 109.5° |
CA | C2 | N2 | 109.9° | 109.5° |
C2 | CA | HA | 107.6° | 109.4° |
CA | C2 | H9 | 109.4° | 109.5° |
CA | C2 | H10 | 109.4° | 109.5° |
C2 | N2 | C | 123.7° | 120.0° |
N2 | C2 | H9 | 109.4° | 109.5° |
N2 | C2 | H10 | 109.4° | 109.4° |
C2 | N2 | H14 | 118.1° | 120.0° |
N2 | C | O | 124.7° | 120.0° |
N2 | C | OXT | 113.9° | 120.0° |
C | N2 | H14 | 118.2° | 120.0° |
O | C | OXT | 121.4° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
H3 | CG1 | H4 | 109.5° | 109.6° |
H3 | CG1 | H5 | 109.5° | 109.4° |
H4 | CG1 | H5 | 109.5° | 109.5° |
H6 | CG2 | H7 | 109.4° | 109.4° |
H6 | CG2 | H8 | 109.5° | 109.5° |
H7 | CG2 | H8 | 109.5° | 109.4° |
H9 | C2 | H10 | 109.5° | 109.5° |
H | N | H2 | 109.5° | 111.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | CB | CG1 | 65.5° | 60.0° |
N | CA | CB | C2 | 123.2° | 120.0° |
N | CA | CB | HA | 119.7° | 120.1° |
N | CA | CB | CG2 | 176.0° | 59.9° |
N | CA | C2 | HA | 117.9° | 120.0° |
N | CA | C2 | N2 | 44.4° | 55.0° |
N | CA | CB | H1 | 55.1° | 179.9° |
N | CA | C2 | H9 | 164.4° | 175.0° |
N | CA | C2 | H10 | 75.7° | 65.0° |
CA | N | H | H2 | 120.0° | 124.0° |
CG1 | CB | CA | CG2 | 118.4° | 120.0° |
CG1 | CB | CA | H1 | 120.6° | 120.0° |
CG1 | CB | CG2 | H1 | 120.7° | 120.0° |
CG1 | CB | CA | C2 | 57.7° | 180.0° |
CG1 | CB | CA | HA | 174.8° | 60.0° |
CB | CG1 | H3 | H4 | 120.0° | 120.0° |
CB | CG1 | H3 | H5 | 120.0° | 119.9° |
CB | CG1 | H4 | H5 | 120.0° | 120.0° |
CG1 | CB | CG2 | H6 | 180.0° | 60.0° |
CG1 | CB | CG2 | H7 | 60.0° | 180.0° |
CG1 | CB | CG2 | H8 | 60.0° | 60.0° |
CA | CB | CG2 | H1 | 121.0° | 120.0° |
CB | CA | C2 | HA | 117.1° | 120.0° |
CB | CA | C2 | N2 | 169.4° | 175.0° |
CA | CB | CG1 | H3 | 180.0° | 59.9° |
CA | CB | CG1 | H4 | 60.0° | 180.0° |
CA | CB | CG1 | H5 | 60.0° | 60.0° |
CA | CB | CG2 | H6 | 61.7° | 60.0° |
CA | CB | CG2 | H7 | 178.3° | 60.0° |
CA | CB | CG2 | H8 | 58.3° | 180.0° |
CB | CA | C2 | H9 | 70.6° | 65.0° |
CB | CA | C2 | H10 | 49.3° | 55.0° |
CB | CA | N | H | 180.0° | 176.0° |
CB | CA | N | H2 | 60.0° | 60.0° |
CG2 | CB | CA | C2 | 60.7° | 60.0° |
CG2 | CB | CA | HA | 56.4° | 180.0° |
CG2 | CB | CG1 | H3 | 61.3° | 60.0° |
CG2 | CB | CG1 | H4 | 178.6° | 60.0° |
CG2 | CB | CG1 | H5 | 58.7° | 180.0° |
CB | CG2 | H6 | H7 | 120.0° | 120.1° |
CB | CG2 | H6 | H8 | 120.0° | 120.0° |
CB | CG2 | H7 | H8 | 120.0° | 120.0° |
CA | C2 | N2 | H9 | 120.1° | 120.0° |
CA | C2 | N2 | H10 | 120.0° | 120.0° |
CA | C2 | N2 | C | 96.6° | 180.0° |
C2 | CA | CB | H1 | 178.3° | 60.0° |
CA | C2 | H9 | H10 | 119.8° | 120.0° |
C2 | CA | N | H | 56.6° | 64.0° |
C2 | CA | N | H2 | 63.4° | 60.0° |
CA | C2 | N2 | H14 | 83.3° | 0.0° |
C2 | N2 | C | H14 | 180.0° | 179.9° |
C2 | N2 | C | O | 5.2° | 0.0° |
C2 | N2 | C | OXT | 178.5° | 180.0° |
N2 | C2 | CA | HA | 73.5° | 65.0° |
N2 | C2 | H9 | H10 | 119.8° | 119.9° |
N2 | C | O | OXT | 176.0° | 180.0° |
C | N2 | C2 | H9 | 23.4° | 60.0° |
C | N2 | C2 | H10 | 143.3° | 60.0° |
N2 | C | OXT | HXT | 176.5° | 180.0° |
O | C | N2 | H14 | 174.8° | 180.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
OXT | C | N2 | H14 | 1.5° | 0.0° |
HA | CA | CB | H1 | 64.6° | 60.0° |
HA | CA | C2 | H9 | 46.6° | 55.0° |
HA | CA | C2 | H10 | 166.5° | 175.0° |
HA | CA | N | H | 60.8° | 56.0° |
HA | CA | N | H2 | 179.2° | 180.0° |
H1 | CB | CG1 | H3 | 59.4° | 180.0° |
H1 | CB | CG1 | H4 | 60.6° | 60.0° |
H1 | CB | CG1 | H5 | 179.4° | 60.0° |
H1 | CB | CG2 | H6 | 59.3° | 180.0° |
H1 | CB | CG2 | H7 | 60.7° | 60.0° |
H1 | CB | CG2 | H8 | 179.3° | 60.0° |
H3 | CG1 | H4 | H5 | 120.0° | 120.0° |
H6 | CG2 | H7 | H8 | 120.0° | 119.9° |
H9 | C2 | N2 | H14 | 156.6° | 120.0° |
H10 | C2 | N2 | H14 | 36.7° | 120.1° |