Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

URM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N13C1sing1.47Å1.45Å
C1O6sing1.44Å1.44Å
C1C2sing1.54Å1.55Å
C1H1sing1.09Å1.10Å
O21C2sing1.43Å1.43Å
C2C3sing1.54Å1.52Å
C2H2sing1.09Å1.10Å
C4C3sing1.55Å1.53Å
C3O7sing1.43Å1.42Å
C3H3sing1.09Å1.10Å
O6C4sing1.44Å1.44Å
C4C5sing1.53Å1.54Å
C4H4sing1.09Å1.10Å
O8C5sing1.43Å1.44Å
C5H5sing1.09Å1.10Å
C5H5Asing1.09Å1.10Å
O7HO7sing0.97Å0.95Å
O8P9sing1.61Å1.59Å
O11P9doub1.48Å1.49Å
O12P9sing1.61Å1.59Å
P9O10sing1.61Å1.49Å
O10HO10sing0.97Å0.95Å
O12P22sing1.61Å1.60Å
C19N13sing1.35Å1.26Å
N13C18sing1.37Å1.36Å
N15C19sing1.35Å1.26Å
N15C20sing1.35Å1.35Å
C20C17sing1.42Å1.47Å
C17C18doub1.35Å1.34Å
C17H17sing1.08Å1.08Å
C18H18sing1.08Å1.08Å
O19C19doub1.22Å1.43Å
O20C20doub1.22Å1.22Å
O21HO21sing0.97Å0.95Å
O24P22doub1.48Å1.49Å
P22O23sing1.61Å1.49Å
P22C45sing1.82Å1.60Å
O23HO23sing0.97Å0.95Å
O36C41sing1.43Å1.45Å
O36C37sing1.43Å1.45Å
C46C37sing1.53Å1.55Å
C37C38sing1.53Å1.55Å
C37H37sing1.09Å1.10Å
C38O42sing1.43Å1.45Å
C38C39sing1.53Å1.56Å
C38H38sing1.09Å1.10Å
C40C39sing1.53Å1.55Å
C39O43sing1.43Å1.44Å
C39H39sing1.09Å1.10Å
C41C40sing1.53Å1.56Å
C40O44sing1.43Å1.45Å
C40H40sing1.09Å1.10Å
C45C41sing1.53Å1.44Å
C41H41sing1.09Å1.10Å
O42HO42sing0.97Å0.95Å
O43HO43sing0.97Å0.95Å
O44HO44sing0.97Å0.95Å
C45H45sing1.09Å1.10Å
C45H45Asing1.09Å1.10Å
C46O47sing1.43Å1.44Å
C46H46sing1.09Å1.10Å
C46H46Asing1.09Å1.10Å
O47HO47sing0.97Å0.95Å
N15HN15sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N13C1O6114.4°110.3°
N13C1C2116.6°110.4°
N13C1H199.0°110.4°
C1N13C19126.7°119.7°
C1N13C18119.1°119.7°
O6C1C2104.3°104.8°
O6C1H1112.6°110.4°
C1O6C4111.8°105.3°
C2C1H1110.1°110.4°
C1C2O21113.9°110.5°
C1C2C3106.0°104.1°
C1C2H2110.0°110.5°
O21C2C3112.7°110.6°
O21C2H2102.9°110.5°
C2O21HO21109.5°114.0°
C3C2H2111.3°110.5°
C2C3C4102.5°104.1°
C2C3O7108.9°110.5°
C2C3H3114.4°110.5°
C4C3O7109.9°110.5°
C4C3H3113.4°110.6°
C3C4O6108.0°104.7°
C3C4C5117.2°110.4°
C3C4H4109.8°110.4°
O7C3H3107.6°110.5°
C3O7HO7109.5°113.9°
O6C4C5119.6°110.4°
O6C4H4106.5°110.5°
C5C4H494.0°110.4°
C4C5O8108.1°109.4°
C4C5H5109.9°109.5°
C4C5H5A110.0°109.5°
O8C5H5110.0°109.5°
O8C5H5A109.9°109.5°
C5O8P9122.3°123.0°
H5C5H5A109.0°109.5°
O8P9O11105.4°109.4°
O8P9O12108.9°109.5°
O8P9O10109.5°109.5°
O11P9O12115.6°109.5°
O11P9O10107.3°109.5°
O12P9O10110.0°109.5°
P9O12P22128.0°134.0°
P9O10HO10109.5°114.0°
O12P22O24102.0°109.5°
O12P22O23119.9°109.5°
O12P22C45113.8°109.5°
C19N13C18114.0°120.6°
N13C19N15136.0°120.9°
N13C19O19113.2°119.5°
N13C18C17119.8°119.7°
N13C18H18120.1°120.2°
C19N15C20113.1°120.2°
N15C19O19110.7°119.5°
C19N15HN15123.5°119.9°
N15C20C17118.3°119.4°
N15C20O20122.1°120.3°
C20N15HN15123.5°119.8°
C20C17C18118.7°119.1°
C20C17H17120.6°120.4°
C17C20O20119.6°120.3°
C18C17H17120.6°120.5°
C17C18H18120.1°120.1°
O24P22O23104.9°109.5°
O24P22C45106.6°109.5°
O23P22C45108.2°109.5°
P22O23HO23109.5°114.0°
P22C45C41130.2°109.4°
P22C45H45103.1°109.4°
P22C45H45A103.1°109.5°
C41O36C37114.5°114.1°
O36C41C40111.4°109.4°
O36C41C45104.1°109.5°
O36C41H41113.6°109.5°
O36C37C46107.8°109.5°
O36C37C38110.1°109.4°
O36C37H37111.4°109.5°
C46C37C38112.8°109.5°
C46C37H37108.6°109.5°
C37C46O47111.2°109.5°
C37C46H46108.9°109.5°
C37C46H46A108.9°109.5°
C38C37H37106.2°109.5°
C37C38O42112.7°109.5°
C37C38C39108.5°109.2°
C37C38H38107.9°109.6°
O42C38C39109.0°109.5°
O42C38H38107.3°109.5°
C38O42HO42109.5°114.0°
C39C38H38111.6°109.5°
C38C39C40109.4°109.0°
C38C39O43110.9°109.6°
C38C39H39108.0°109.6°
C40C39O43107.8°109.6°
C40C39H39111.1°109.5°
C39C40C41110.6°109.2°
C39C40O44113.0°109.5°
C39C40H40107.2°109.5°
O43C39H39109.6°109.5°
C39O43HO43109.5°114.0°
C41C40O44112.3°109.5°
C41C40H40108.0°109.6°
C40C41C45114.4°109.5°
C40C41H41103.2°109.5°
O44C40H40105.3°109.5°
C40O44HO44109.5°114.0°
C45C41H41110.5°109.5°
C41C45H45103.1°109.5°
C41C45H45A103.1°109.5°
H45C45H45A115.0°109.5°
O47C46H46108.9°109.4°
O47C46H46A108.9°109.5°
C46O47HO47109.5°114.0°
H46C46H46A110.0°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N13C1O6C2128.6°118.8°
N13C1O6H1112.0°122.3°
N13C1C2H1111.8°122.3°
N13C1C2O21132.2°98.5°
N13C1C2C3103.3°142.8°
N13C1C2H217.2°24.1°
N13C1O6C4117.8°159.4°
C1N13C19C18175.2°179.8°
C1N13C19N15176.1°180.0°
C1N13C18C17176.5°180.0°
C1N13C18H183.4°0.1°
C1N13C19O193.6°0.1°
O6C1C2H1121.0°118.9°
O6C1C2O21100.6°142.7°
O6C1C2C323.9°24.0°
O6C1C2H2144.4°94.7°
C1O6C4C36.4°40.5°
C1O6C4C5144.0°159.3°
C1O6C4H4111.4°78.3°
O6C1N13C19143.8°53.3°
O6C1N13C1841.3°126.5°
C1C2O21C3120.9°114.7°
C1C2O21H2119.1°122.7°
C1C2C3H2119.6°118.6°
C1C2C3C427.1°0.0°
C1C2C3O7143.5°118.6°
C1C2C3H396.2°118.8°
C2C1O6C410.8°40.5°
C2C1N13C1994.2°62.0°
C2C1N13C1880.8°118.2°
C1C2O21HO21180.0°180.0°
H1C1C2O2120.4°23.8°
H1C1C2C3145.0°94.9°
H1C1C2H294.6°146.5°
H1C1O6C4130.2°78.3°
H1C1N13C1923.8°175.6°
H1C1N13C18161.2°4.2°
O21C2C3H2115.1°122.7°
O21C2C3C498.2°118.6°
O21C2C3O718.2°0.0°
O21C2C3H3138.6°122.6°
C2C3C4O7115.7°118.6°
C2C3C4H3123.8°118.7°
C2C3O7H3124.5°122.6°
C2C3C4O621.0°24.0°
C2C3C4C5159.7°142.8°
C2C3C4H494.8°94.9°
C2C3O7HO7180.0°61.5°
C3C2O21HO2159.2°65.3°
H2C2C3C4146.7°118.7°
H2C2C3O796.9°122.7°
H2C2C3H323.5°0.1°
H2C2O21HO2160.8°57.4°
C4C3O7H3123.9°122.7°
C3C4O6C5137.6°118.8°
C3C4O6H4117.9°118.8°
C3C4C5H4114.6°122.3°
C3C4C5O882.5°175.0°
C3C4C5H5157.5°55.0°
C3C4C5H5A37.5°65.0°
C4C3O7HO768.4°176.2°
O7C3C4O6136.7°142.6°
O7C3C4C584.6°98.5°
O7C3C4H420.9°23.7°
H3C3C4O6102.9°94.8°
H3C3C4C535.9°24.1°
H3C3C4H4141.4°146.4°
H3C3O7HO755.5°61.1°
O6C4C5H4111.6°122.4°
O6C4C5O851.3°69.7°
O6C4C5H568.7°170.4°
O6C4C5H5A171.3°50.3°
C4C5O8H5120.0°120.0°
C4C5O8H5A120.0°120.0°
C4C5H5H5A120.6°120.0°
C4C5O8P9136.6°180.0°
H4C4C5O8162.9°52.7°
H4C4C5H542.9°67.2°
H4C4C5H5A77.1°172.8°
O8C5H5H5A120.6°120.0°
C5O8P9O11115.3°55.0°
C5O8P9O12120.1°175.0°
C5O8P9O100.2°65.0°
H5C5O8P9103.4°60.1°
H5AC5O8P916.6°60.0°
O8P9O11O12120.3°120.0°
O8P9O11O10116.7°120.0°
O8P9O12O10120.0°120.0°
O8P9O10HO10113.9°60.0°
O8P9O12P22101.4°165.0°
O11P9O12O10121.7°120.0°
O11P9O10HO100.0°180.0°
O11P9O12P22140.3°45.0°
O12P9O10HO10126.4°60.0°
P9O12P22O24148.8°60.0°
P9O12P22O2333.6°60.0°
P9O12P22C4596.8°180.0°
O10P9O12P2218.6°75.0°
O12P22O24O23125.8°120.0°
O12P22O24C45119.6°120.0°
O12P22O23C45132.8°120.0°
O12P22O23HO23113.7°60.0°
O12P22C45C4145.9°175.0°
O12P22C45H4574.1°55.0°
O12P22C45H45A165.9°65.0°
N13C19N15O19179.7°179.9°
N13C19N15C200.4°0.1°
C19N13C18C171.0°0.3°
C19N13C18H18179.0°179.8°
N13C19N15HN15179.6°179.9°
C18N13C19N150.9°0.2°
N13C18C17C200.7°0.1°
N13C18C17H18180.0°179.9°
N13C18C17H17179.3°179.9°
C18N13C19O19178.8°179.7°
C19N15C20HN15180.0°180.0°
C19N15C20C170.0°0.3°
C19N15C20O20178.6°180.0°
N15C20C17O20178.6°179.8°
N15C20C17C180.1°0.2°
N15C20C17H17179.8°179.8°
C20N15C19O19179.3°180.0°
C20C17C18H17180.0°180.0°
C20C17C18H18179.3°179.9°
C17C20N15HN15180.0°179.7°
C18C17C20O20178.5°180.0°
H17C17C18H180.7°0.0°
H17C17C20O201.6°0.0°
O19C19N15HN150.7°0.1°
O20C20N15HN151.4°0.0°
O24P22O23C45113.5°120.0°
O24P22O23HO230.0°180.0°
O24P22C45C4165.7°55.0°
O24P22C45H45174.3°65.0°
O24P22C45H45A54.3°175.0°
O23P22C45C41178.1°65.0°
O23P22C45H4561.9°175.0°
O23P22C45H45A58.1°55.0°
C45P22O23HO23113.5°60.0°
P22C45C41O3675.2°65.0°
P22C45C41C40163.0°175.1°
P22C45C41H45120.0°120.0°
P22C45C41H45A120.0°120.0°
P22C45C41H4147.1°55.1°
P22C45H45H45A111.4°120.0°
C41O36C37C46176.7°178.9°
C41O36C37C3859.9°61.2°
C41O36C37H3757.7°58.8°
O36C41C40C3952.6°57.6°
O36C41C40C45117.7°119.9°
O36C41C40H41122.2°120.0°
O36C41C40O44179.9°177.5°
O36C41C40H4064.4°62.4°
O36C41C45H41122.4°120.1°
O36C41C45H4544.8°55.0°
O36C41C45H45A164.8°175.0°
O36C37C46C38121.7°119.9°
O36C37C46H37120.8°120.0°
O36C37C38H37120.7°120.0°
O36C37C38O4261.5°62.3°
O36C37C38C3959.3°57.6°
O36C37C38H38179.7°177.5°
C37O36C41C4056.1°61.1°
C37O36C41C4567.6°58.8°
C37O36C41H41172.1°178.9°
O36C37C46O47169.4°65.0°
O36C37C46H4649.4°175.0°
O36C37C46H46A70.6°55.0°
C46C37C38H37118.8°120.1°
C46C37C38O4259.0°57.7°
C46C37C38C39179.7°177.6°
C46C37C38H3859.2°62.5°
C37C46O47H46120.0°120.0°
C37C46O47H46A120.0°120.1°
C37C46H46H46A119.3°120.1°
C37C46O47HO47180.0°180.0°
C37C38O42C39120.5°119.7°
C37C38O42H38118.5°120.2°
C37C38C39H38118.7°120.0°
C37C38C39C4057.6°56.9°
C37C38C39O43176.4°176.9°
C37C38C39H3963.4°62.9°
C37C38O42HO42180.0°60.1°
C38C37C46O4747.6°175.0°
C38C37C46H4672.4°55.1°
C38C37C46H46A167.6°64.9°
H37C37C38O42177.8°177.7°
H37C37C38C3961.4°62.4°
H37C37C38H3859.6°57.6°
H37C37C46O4769.8°55.0°
H37C37C46H46170.2°64.9°
H37C37C46H46A50.2°175.0°
O42C38C39H38118.3°120.1°
O42C38C39C4065.4°63.0°
O42C38C39O4353.4°57.0°
O42C38C39H39173.5°177.2°
C38C39C40O43120.7°119.9°
C38C39C40H39119.2°119.9°
C38C39O43H39119.2°120.2°
C38C39C40C4154.6°57.0°
C38C39C40O44178.6°176.9°
C38C39C40H4063.0°63.0°
C39C38O42HO4259.5°179.8°
C38C39O43HO43180.0°60.0°
H38C38C39C40176.3°176.9°
H38C38C39O4364.9°63.2°
H38C38C39H3955.2°57.0°
H38C38O42HO4261.5°60.1°
C40C39O43H39121.1°120.2°
C39C40C41O44127.3°119.9°
C39C40C41H40117.0°120.0°
C39C40O44H40116.7°120.1°
C39C40C41C4565.0°62.4°
C39C40C41H41174.9°177.6°
C40C39O43HO4360.3°179.5°
C39C40O44HO44180.0°59.9°
O43C39C40C41175.3°176.9°
O43C39C40O4457.9°63.2°
O43C39C40H4057.7°56.9°
H39C39C40C4164.6°62.9°
H39C39C40O4462.3°57.0°
H39C39C40H40177.9°177.1°
H39C39O43HO4360.8°60.3°
C41C40O44H40117.3°120.1°
C40C41C45H41115.9°120.1°
C41C40O44HO4454.0°179.7°
C40C41C45H4577.0°64.9°
C40C41C45H45A43.0°55.1°
O44C40C41C4562.3°57.6°
O44C40C41H4157.8°62.5°
H40C40C41C45177.9°177.7°
H40C40C41H4157.9°57.6°
H40C40O44HO4463.3°60.2°
C41C45H45H45A111.4°120.0°
H41C41C45H45167.1°175.0°
H41C41C45H45A72.9°64.9°
O47C46H46H46A119.3°120.0°
H46C46O47HO4760.0°60.0°
H46AC46O47HO4760.0°60.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon