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UR8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NO1sing1.41Å1.41Å
NCsing1.35Å1.31Å
OCdoub1.21Å1.28Å
O1C1sing1.44Å1.45Å
CC2sing1.51Å1.48Å
C1C2sing1.56Å1.53Å
C1C4sing1.54Å1.53Å
C2C3sing1.55Å1.50Å
C4N1sing1.48Å1.47Å
C4C5sing1.51Å1.52Å
C3N1sing1.49Å1.45Å
O2C5doub1.21Å1.30Å
C5O3sing1.34Å1.21Å
NH1sing0.97Å1.00Å
O3H2sing0.97Å0.95Å
C1H3sing1.09Å1.10Å
C2H4sing1.09Å1.10Å
C3H5sing1.09Å1.10Å
C3H6sing1.09Å1.10Å
C4H7sing1.09Å1.10Å
N1H8sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1NC110.7°111.8°
NO1C1109.0°108.4°
O1NH1124.6°124.1°
NCO121.2°126.0°
NCC2112.4°107.9°
CNH1124.7°124.1°
OCC2126.4°126.1°
O1C1C2105.1°102.5°
O1C1C4107.3°108.6°
O1C1H3113.9°113.2°
CC2C1102.5°103.1°
CC2C3111.3°109.4°
CC2H4113.1°113.2°
C2C1C4104.7°104.8°
C1C2C3104.0°102.8°
C2C1H3112.5°113.2°
C1C2H4112.3°113.5°
C1C4N1104.5°107.3°
C1C4C5111.7°109.9°
C4C1H3112.6°113.7°
C1C4H7109.4°109.8°
C2C3N1104.6°103.3°
C3C2H4112.8°113.8°
C2C3H5110.7°110.7°
C2C3H6110.7°110.6°
N1C4C5111.5°109.9°
C4N1C3104.0°105.8°
N1C4H7110.2°109.9°
C4N1H8110.8°111.0°
C4C5O2113.4°119.9°
C4C5O3122.4°120.0°
C5C4H7109.5°110.0°
N1C3H5110.7°110.7°
N1C3H6110.7°110.7°
C3N1H8110.8°111.0°
O2C5O3124.2°120.0°
C5O3H2109.5°117.0°
H5C3H6109.5°110.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1NCH1180.0°179.7°
O1NCO178.0°177.9°
O1NCC21.7°2.1°
NO1C1C24.0°24.6°
NO1C1C4107.1°135.1°
NO1C1H3127.6°97.7°
NCOC2179.6°180.0°
CNO1C11.6°18.0°
NCC2C14.1°13.0°
NCC2C3114.8°95.9°
NCC2H4117.0°136.0°
OCC2C1175.6°167.0°
OCC2C364.9°84.1°
OCNH12.0°2.4°
OCC2H463.3°44.0°
O1C1C2C4.7°22.4°
O1C1C2C4113.0°113.3°
O1C1C2H3124.4°122.3°
O1C1C4H3126.1°126.9°
O1C1C2C3120.8°91.3°
O1C1C4N193.6°110.2°
O1C1C4C5145.8°130.3°
C1O1NH1178.4°161.7°
O1C1C2H4117.0°145.3°
O1C1C4H724.4°9.2°
CC2C1C3116.1°113.8°
CC2C1H4121.7°122.9°
CC2C1C4108.3°135.8°
CC2C3H4128.4°127.8°
CC2C3N178.5°146.6°
C2CNH1178.3°177.6°
CC2C1H3129.2°99.8°
CC2C3H540.7°28.1°
CC2C3H6162.3°94.9°
C2C1C4H3122.5°124.1°
C1C2C3H4121.9°123.1°
C2C1C4N117.8°1.3°
C2C1C4C5102.8°120.7°
C1C2C3N131.2°37.5°
C1C2C3H5150.5°80.9°
C1C2C3H688.0°156.0°
C2C1C4H7135.8°118.1°
C4C1C2C37.8°22.0°
C1C4N1C5120.8°119.4°
C1C4N1H7117.4°119.4°
C1C4C5H7121.3°121.0°
C1C4N1C337.9°25.4°
C1C4C5O239.6°100.1°
C1C4C5O3140.9°79.9°
C4C1C2H4130.1°101.4°
C1C4N1H8157.0°95.1°
C2C3N1C443.5°39.4°
C2C3N1H5119.2°118.5°
C2C3N1H6119.2°118.4°
C3C2C1H3114.8°146.4°
C2C3H5H6122.3°123.0°
C2C3N1H8162.7°81.1°
N1C4C5H7122.2°121.1°
C4N1C3H8119.1°120.5°
N1C4C5O2156.1°17.8°
N1C4C5O324.4°162.2°
N1C4C1H3140.3°122.9°
C4N1C3H5162.8°79.0°
C4N1C3H675.7°157.9°
C5C4N1C382.9°144.9°
C4C5O2O3179.5°180.0°
C4C5O3H2179.5°180.0°
C5C4C1H319.7°3.4°
C5C4N1H836.2°24.4°
N1C3C2H4153.1°85.6°
N1C3H5H6122.2°123.1°
C3N1C4H7155.2°94.0°
O2C5O3H20.0°0.0°
O2C5C4H781.7°138.9°
O3C5C4H797.8°41.1°
H3C1C2H47.5°23.0°
H3C1C4H7101.7°117.7°
H4C2C3H587.6°155.9°
H4C2C3H633.9°32.9°
H5C3N1H878.1°160.4°
H6C3N1H843.4°37.3°
H7C4N1H885.6°145.5°

246704

PDB entries from 2025-12-24

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