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UR5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCsing1.35Å1.31Å
NO1sing1.41Å1.41Å
OCdoub1.21Å1.28Å
CC2sing1.51Å1.48Å
O1C1sing1.44Å1.45Å
C2C1sing1.56Å1.53Å
C2C3sing1.55Å1.51Å
C1C4sing1.54Å1.53Å
C4N1sing1.48Å1.47Å
C4C5sing1.51Å1.52Å
N1C3sing1.49Å1.45Å
C5O2doub1.21Å1.31Å
C5O3sing1.34Å1.21Å
NH1sing0.97Å1.00Å
C1H2sing1.09Å1.10Å
C2H3sing1.09Å1.10Å
C3H4sing1.09Å1.10Å
C3H5sing1.09Å1.10Å
C4H6sing1.09Å1.10Å
N1H7sing1.01Å1.00Å
O3H9sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CNO1110.7°111.8°
NCO121.2°126.1°
NCC2112.4°107.9°
CNH1124.6°124.1°
NO1C1109.0°108.4°
O1NH1124.7°124.1°
OCC2126.4°126.0°
CC2C1102.5°103.1°
CC2C3111.9°109.5°
CC2H3113.0°113.2°
O1C1C2105.2°102.5°
O1C1C4106.9°108.5°
O1C1H2113.8°113.8°
C1C2C3103.9°102.9°
C2C1C4105.4°104.7°
C2C1H2112.4°113.3°
C1C2H3112.2°113.4°
C2C3N1105.1°103.4°
C3C2H3112.6°113.9°
C2C3H4110.6°110.6°
C2C3H5110.6°110.6°
C1C4N1104.8°107.3°
C1C4C5111.6°109.9°
C4C1H2112.5°113.1°
C1C4H6109.2°109.8°
N1C4C5111.8°109.9°
C4N1C3105.1°105.8°
N1C4H6110.1°109.9°
C4N1H7110.6°111.1°
C4C5O2113.3°120.0°
C4C5O3122.4°120.0°
C5C4H6109.4°110.0°
N1C3H4110.6°110.7°
N1C3H5110.6°110.8°
C3N1H7110.5°111.0°
O2C5O3124.3°120.0°
C5O3H9109.5°117.0°
H4C3H5109.4°110.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CNO1H1180.0°179.7°
NCOC2179.8°180.0°
CNO1C11.4°18.0°
NCC2C13.6°13.0°
NCC2C3114.4°95.9°
NCC2H3117.3°135.9°
O1NCO178.2°177.9°
O1NCC21.6°2.1°
NO1C1C23.6°24.7°
NO1C1C4108.2°135.2°
NO1C1H2127.0°98.0°
OCC2C1176.1°167.0°
OCC2C365.4°84.1°
OCNH11.8°1.8°
OCC2H362.9°44.1°
CC2C1O14.2°22.5°
CC2C1C3116.7°113.8°
CC2C1H3121.5°122.7°
CC2C3H3128.5°127.8°
CC2C1C4108.6°135.8°
CC2C3N180.2°146.6°
C2CNH1178.4°178.2°
CC2C1H2128.5°100.5°
CC2C3H4160.5°94.9°
CC2C3H539.2°28.0°
O1C1C2C4112.8°113.3°
O1C1C2H2124.4°123.0°
O1C1C2C3120.8°91.3°
O1C1C4H2125.6°127.2°
O1C1C4N195.7°110.2°
O1C1C4C5143.2°130.3°
C1O1NH1178.6°162.2°
O1C1C2H3117.3°145.3°
O1C1C4H622.1°9.2°
C1C2C3H3121.6°123.1°
C2C1C4H2122.8°123.8°
C2C1C4N115.8°1.3°
C2C1C4C5105.3°120.7°
C1C2C3N129.7°37.5°
C1C2C3H489.6°156.0°
C1C2C3H5149.1°81.1°
C2C1C4H6133.7°118.1°
C3C2C1C48.1°22.0°
C2C3N1C440.9°39.4°
C2C3N1H4119.3°118.4°
C2C3N1H5119.3°118.5°
C3C2C1H2114.8°145.7°
C2C3H4H5122.0°122.9°
C2C3N1H778.4°160.0°
C1C4N1C5121.0°119.5°
C1C4N1H6117.3°119.4°
C1C4C5H6121.0°121.1°
C1C4N1C335.1°25.4°
C1C4C5O2156.1°100.0°
C1C4C5O323.4°79.9°
C4C1C2H3129.9°101.4°
C1C4N1H784.2°145.9°
N1C4C5H6122.1°121.1°
C4N1C3H7119.3°120.6°
N1C4C5O287.0°17.9°
N1C4C5O393.6°162.2°
N1C4C1H2138.7°122.5°
C4N1C3H478.4°157.8°
C4N1C3H5160.2°79.1°
C5C4N1C385.9°144.9°
C4C5O2O3179.5°179.9°
C5C4C1H217.6°3.1°
C5C4N1H7154.8°94.6°
C4C5O3H9179.4°180.0°
N1C3C2H3151.3°85.6°
N1C3H4H5122.0°123.2°
C3N1C4H6152.4°94.0°
O2C5C4H635.2°138.9°
O2C5O3H90.0°0.0°
O3C5C4H6144.3°41.1°
H2C1C2H37.0°22.3°
H2C1C4H6103.4°118.0°
H3C2C3H432.0°32.9°
H3C2C3H589.4°155.8°
H4C3N1H7162.3°81.6°
H5C3N1H740.9°41.4°
H6C4N1H733.1°26.5°

225158

PDB entries from 2024-09-18

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