Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

UPZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C16C15sing1.53Å1.53Å
C15O13sing1.45Å1.46Å
O13C10sing1.35Å1.33Å
O12C10doub1.22Å1.22Å
C10C3sing1.47Å1.47Å
C3C8sing1.41Å1.42Å
C3C4doub1.39Å1.39Å
C8N6doub1.31Å1.32Å
C4C14sing1.51Å1.51Å
C4N1sing1.35Å1.34Å
N6C2sing1.34Å1.35Å
N1C2sing1.37Å1.38Å
N1N7sing1.40Å1.39Å
C2C5doub1.39Å1.40Å
N7C9sing1.35Å1.34Å
C5C9sing1.40Å1.41Å
C9O11doub1.22Å1.23Å
C8H1sing1.08Å1.08Å
C14H2sing1.09Å1.10Å
C14H3sing1.09Å1.10Å
C14H4sing1.09Å1.10Å
C15H5sing1.09Å1.10Å
C15H6sing1.09Å1.10Å
C16H7sing1.09Å1.10Å
C16H8sing1.09Å1.10Å
C16H9sing1.09Å1.10Å
C5H10sing1.08Å1.08Å
N7H12sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C16C15O13107.0°109.5°
C16C15H5110.1°109.5°
C16C15H6110.1°109.4°
C15C16H7109.5°109.4°
C15C16H8109.5°109.4°
C15C16H9109.5°109.5°
C15O13C10117.3°117.0°
O13C15H5110.1°109.5°
O13C15H6110.1°109.5°
O13C10O12121.6°120.0°
O13C10C3115.0°120.0°
O12C10C3123.4°119.9°
C10C3C8118.5°120.6°
C10C3C4122.4°120.6°
C8C3C4119.1°118.8°
C3C8N6120.6°119.9°
C3C8H1119.7°120.0°
C3C4C14123.6°120.4°
C3C4N1118.1°119.1°
C8N6C2120.1°121.1°
N6C8H1119.7°120.1°
C14C4N1118.3°120.5°
C4C14H2109.5°109.5°
C4C14H3109.5°109.5°
C4C14H4109.5°109.5°
C4N1C2121.6°120.2°
C4N1N7128.6°131.8°
N6C2N1120.5°120.9°
N6C2C5132.9°131.6°
C2N1N7109.7°108.0°
N1C2C5106.6°107.5°
N1N7C9107.5°108.4°
N1N7H12126.3°125.8°
C2C5C9107.0°107.7°
C2C5H10126.5°126.2°
N7C9C5109.2°108.3°
N7C9O11123.1°125.8°
C9N7H12126.2°125.8°
C5C9O11127.7°125.9°
C9C5H10126.5°126.1°
H2C14H3109.5°109.5°
H2C14H4109.5°109.4°
H3C14H4109.5°109.5°
H5C15H6109.5°109.5°
H7C16H8109.5°109.5°
H7C16H9109.5°109.5°
H8C16H9109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C16C15O13H5119.6°120.1°
C16C15O13H6119.6°119.9°
C16C15O13C10172.4°180.0°
C16C15H5H6121.2°120.0°
C15C16H7H8120.0°119.9°
C15C16H7H9120.0°120.0°
C15C16H8H9120.0°120.0°
C15O13C10O122.6°0.0°
C15O13C10C3175.5°180.0°
O13C15H5H6121.1°120.0°
O13C15C16H7180.0°180.0°
O13C15C16H860.0°60.0°
O13C15C16H960.0°59.9°
O13C10O12C3177.9°180.0°
O13C10C3C812.6°104.7°
O13C10C3C4167.3°75.6°
C10O13C15H568.0°59.9°
C10O13C15H652.8°60.0°
O12C10C3C8165.4°75.3°
O12C10C3C414.6°104.4°
C10C3C8C4179.9°179.6°
C10C3C8N6179.6°180.0°
C10C3C4C140.1°0.4°
C10C3C4N1179.4°179.9°
C10C3C8H10.4°0.1°
C3C8N6H1180.0°179.9°
C8C3C4C14180.0°180.0°
C8C3C4N10.7°0.5°
C3C8N6C20.8°0.0°
C4C3C8N60.3°0.4°
C3C4C14N1179.3°179.5°
C3C4N1C21.2°0.2°
C3C4N1N7179.9°179.9°
C4C3C8H1179.7°179.5°
C3C4C14H2180.0°5.3°
C3C4C14H360.0°125.3°
C3C4C14H460.0°114.7°
C8N6C2N10.3°0.3°
C8N6C2C5178.8°179.9°
C14C4N1C2179.5°179.7°
C14C4N1N70.7°0.6°
C4C14H2H3120.0°120.0°
C4C14H2H4120.0°120.0°
C4C14H3H4120.0°120.0°
C4N1C2N60.7°0.1°
C4N1C2N7179.0°179.8°
C4N1C2C5178.2°180.0°
C4N1N7C9177.8°179.7°
N1C4C14H20.7°175.2°
N1C4C14H3119.3°55.2°
N1C4C14H4120.7°64.8°
C4N1N7H122.2°0.2°
N6C2N1C5178.9°179.8°
N6C2N1N7179.7°179.6°
N6C2C5C9178.9°180.0°
C2N6C8H1179.2°179.9°
N6C2C5H101.1°0.1°
C2N1N7C91.0°0.6°
N1C2C5C90.3°0.2°
N1C2C5H10179.7°179.7°
C2N1N7H12179.0°179.9°
N7N1C2C50.8°0.2°
N1N7C9H12180.0°179.5°
N1N7C9C50.9°0.7°
N1N7C9O11179.2°179.9°
C2C5C9N70.4°0.5°
C2C5C9H10180.0°179.9°
C2C5C9O11179.7°180.0°
N7C9C5O11180.0°179.5°
N7C9C5H10179.6°179.4°
C5C9N7H12179.2°179.8°
O11C9C5H100.3°0.1°
O11C9N7H120.8°0.3°
H2C14H3H4120.0°120.0°
H5C15C16H760.4°60.0°
H5C15C16H859.6°60.0°
H5C15C16H9179.6°180.0°
H6C15C16H760.4°60.0°
H6C15C16H8179.6°180.0°
H6C15C16H959.6°60.0°
H7C16H8H9120.0°120.1°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon