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UMQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2O2sing1.43Å1.42Å
C2C1sing1.53Å1.55Å
C2C3sing1.53Å1.43Å
C2H21sing1.09Å1.12Å
C4C5sing1.53Å1.54Å
C4O4sing1.43Å1.40Å
C4C3sing1.53Å1.55Å
C4H41sing1.09Å1.11Å
C5C6sing1.53Å1.54Å
C5O5sing1.43Å1.40Å
C5H51sing1.09Å1.11Å
C6O6sing1.43Å1.41Å
C6H61sing1.09Å1.12Å
C6H62sing1.09Å1.11Å
O2HO21sing0.97Å0.95Å
O4HO41sing0.97Å0.95Å
C1O1sing1.43Å1.41Å
C1O5sing1.43Å1.40Å
C1H11sing1.09Å1.12Å
C3O3sing1.43Å1.42Å
C3H31sing1.09Å1.11Å
O1C4'sing1.43Å1.42Å
O3HO31sing0.97Å0.95Å
O6HO61sing0.97Å0.95Å
C1'C2'sing1.53Å1.54Å
C1'O1'sing1.43Å1.42Å
C1'O5'sing1.43Å1.41Å
C1'H1'1sing1.09Å1.11Å
C2'C3'sing1.53Å1.55Å
C2'O2'sing1.43Å1.42Å
C2'H2'1sing1.09Å1.11Å
C3'C4'sing1.53Å1.55Å
C3'O3'sing1.43Å1.41Å
C3'H3'1sing1.09Å1.11Å
C4'C5'sing1.53Å1.54Å
C4'H4'1sing1.09Å1.12Å
C5'C6'sing1.53Å1.54Å
C5'O5'sing1.43Å1.41Å
C5'H5'1sing1.09Å1.11Å
C6'O6'sing1.43Å1.40Å
C6'H6'1sing1.09Å1.11Å
C6'H6'2sing1.09Å1.12Å
O1'CAsing1.43Å1.42Å
O3'HO3'sing0.97Å0.95Å
O6'HO6'sing0.97Å0.95Å
O2'HO2'sing0.97Å0.95Å
CACBsing1.53Å1.55Å
CAHA1sing1.09Å1.12Å
CAHA2sing1.09Å1.11Å
CBCCsing1.53Å1.53Å
CBHB1sing1.09Å1.12Å
CBHB2sing1.09Å1.11Å
CCCDsing1.53Å1.56Å
CCHC1sing1.09Å1.11Å
CCHC2sing1.09Å1.12Å
CDCFsing1.53Å1.53Å
CDHD1sing1.09Å1.12Å
CDHD2sing1.09Å1.11Å
CFCGsing1.53Å1.54Å
CFHF1sing1.09Å1.11Å
CFHF2sing1.09Å1.12Å
CGCHsing1.53Å1.54Å
CGHG1sing1.09Å1.11Å
CGHG2sing1.09Å1.12Å
CHCIsing1.53Å1.55Å
CHHH1sing1.09Å1.11Å
CHHH2sing1.09Å1.12Å
CICJsing1.53Å1.54Å
CIHI1sing1.09Å1.12Å
CIHI2sing1.09Å1.12Å
CJCKsing1.53Å1.54Å
CJHJ1sing1.09Å1.11Å
CJHJ2sing1.09Å1.11Å
CKCLsing1.53Å1.54Å
CKHK1sing1.09Å1.11Å
CKHK2sing1.09Å1.12Å
CLHL1sing1.09Å1.12Å
CLHL2sing1.09Å1.12Å
CLHL3sing1.09Å1.11Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C2C1112.0°109.6°
O2C2C3108.6°109.5°
O2C2H21108.3°109.5°
C2O2HO21112.1°106.8°
C1C2C3109.5°109.1°
C1C2H21107.4°109.6°
C2C1O1107.6°109.5°
C2C1O5111.0°109.8°
C2C1H11108.1°109.4°
C3C2H21111.0°109.5°
C2C3C4108.9°108.6°
C2C3O3108.4°109.8°
C2C3H31111.5°109.6°
C5C4O4111.5°109.5°
C5C4C3107.5°109.0°
C5C4H41109.1°109.6°
C4C5C6110.0°109.3°
C4C5O5109.3°109.8°
C4C5H51107.7°109.5°
O4C4C3108.4°109.6°
O4C4H41108.2°109.6°
C4O4HO41111.5°106.8°
C3C4H41112.2°109.5°
C4C3O3112.2°109.6°
C4C3H31107.7°109.6°
C6C5O5104.3°109.4°
C6C5H51112.4°109.4°
C5C6O6116.7°109.4°
C5C6H61109.6°109.4°
C5C6H62109.6°109.5°
O5C5H51113.0°109.4°
C5O5C1112.1°107.6°
O6C6H61109.6°109.5°
O6C6H62109.6°109.5°
C6O6HO61116.7°106.8°
H61C6H62100.6°109.5°
O1C1O5104.0°109.4°
O1C1H11114.6°109.4°
C1O1C4'114.5°106.9°
O5C1H11111.5°109.4°
O3C3H31108.2°109.6°
C3O3HO31108.3°106.8°
O1C4'C3'110.9°109.7°
O1C4'C5'109.1°109.6°
O1C4'H4'1107.3°109.5°
C2'C1'O1'112.2°109.4°
C2'C1'O5'110.4°109.8°
C2'C1'H1'1107.8°109.4°
C1'C2'C3'105.2°109.0°
C1'C2'O2'108.3°109.6°
C1'C2'H2'1114.3°109.6°
O1'C1'O5'111.8°109.5°
O1'C1'H1'1106.2°109.4°
C1'O1'CA104.7°106.8°
O5'C1'H1'1108.2°109.4°
C1'O5'C5'115.4°107.6°
C3'C2'O2'113.5°109.5°
C3'C2'H2'1109.4°109.6°
C2'C3'C4'110.8°108.6°
C2'C3'O3'106.2°109.8°
C2'C3'H3'1112.0°109.7°
O2'C2'H2'1106.3°109.5°
C2'O2'HO2'108.3°106.8°
C4'C3'O3'113.1°109.6°
C4'C3'H3'1105.1°109.6°
C3'C4'C5'104.3°109.0°
C3'C4'H4'1111.8°109.5°
O3'C3'H3'1109.7°109.6°
C3'O3'HO3'106.3°106.8°
C5'C4'H4'1113.5°109.5°
C4'C5'C6'107.3°109.3°
C4'C5'O5'108.5°109.9°
C4'C5'H5'1111.1°109.4°
C6'C5'O5'108.1°109.4°
C6'C5'H5'1111.5°109.4°
C5'C6'O6'109.1°109.5°
C5'C6'H6'1112.4°109.5°
C5'C6'H6'2112.3°109.5°
O5'C5'H5'1110.3°109.4°
O6'C6'H6'1112.4°109.5°
O6'C6'H6'2112.4°109.5°
C6'O6'HO6'109.1°106.8°
H6'1C6'H6'298.1°109.5°
O1'CACB117.3°109.5°
O1'CAHA1109.3°109.5°
O1'CAHA2109.4°109.5°
CBCAHA1109.4°109.5°
CBCAHA2109.4°109.5°
CACBCC117.3°109.5°
CACBHB1109.4°109.5°
CACBHB2109.4°109.5°
HA1CAHA2100.8°109.4°
CCCBHB1109.4°109.5°
CCCBHB2109.4°109.4°
CBCCCD106.3°109.5°
CBCCHC1113.5°109.5°
CBCCHC2113.4°109.5°
HB1CBHB2100.7°109.4°
CDCCHC1113.4°109.5°
CDCCHC2113.3°109.4°
CCCDCF112.7°109.5°
CCCDHD1111.1°109.5°
CCCDHD2111.1°109.4°
HC1CCHC297.1°109.4°
CFCDHD1111.0°109.4°
CFCDHD2111.0°109.5°
CDCFCG111.7°109.6°
CDCFHF1111.4°109.5°
CDCFHF2111.4°109.5°
HD1CDHD299.3°109.5°
CGCFHF1111.3°109.4°
CGCFHF2111.4°109.5°
CFCGCH113.7°109.6°
CFCGHG1110.7°109.4°
CFCGHG2110.7°109.4°
HF1CFHF299.0°109.4°
CHCGHG1110.6°109.5°
CHCGHG2110.6°109.5°
CGCHCI111.4°109.5°
CGCHHH1111.5°109.4°
CGCHHH2111.5°109.4°
HG1CGHG299.6°109.4°
CICHHH1111.5°109.5°
CICHHH2111.5°109.4°
CHCICJ113.0°109.5°
CHCIHI1110.9°109.5°
CHCIHI2111.0°109.5°
HH1CHHH298.9°109.6°
CJCIHI1110.9°109.5°
CJCIHI2110.9°109.5°
CICJCK110.8°109.5°
CICJHJ1111.7°109.5°
CICJHJ2111.7°109.4°
HI1CIHI299.4°109.4°
CKCJHJ1111.7°109.5°
CKCJHJ2111.7°109.5°
CJCKCL111.9°109.5°
CJCKHK1111.4°109.5°
CJCKHK2111.3°109.4°
HJ1CJHJ298.7°109.5°
CLCKHK1111.3°109.5°
CLCKHK2111.3°109.4°
CKCLHL1111.9°109.5°
CKCLHL2111.3°109.4°
CKCLHL3111.4°109.5°
HK1CKHK299.0°109.5°
HL1CLHL2111.3°109.5°
HL1CLHL3111.3°109.5°
HL2CLHL399.1°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C2C1C3120.5°119.9°
O2C2C1H21118.9°120.2°
O2C2C3H21119.0°120.1°
O2C2C3C4179.9°173.7°
O2C2C1O165.2°61.1°
O2C2C1O5178.4°178.8°
O2C2C1H1159.0°58.7°
O2C2C3O357.6°66.5°
O2C2C3H3161.4°54.0°
C1C2C3H21118.4°120.0°
C1C2C3C457.5°53.8°
C2C1O5C559.7°67.5°
C1C2O2HO21180.0°60.3°
C2C1O1O5117.8°120.3°
C2C1O1H11120.3°119.9°
C2C1O5H11120.6°120.1°
C1C2C3O3179.8°173.6°
C1C2C3H3161.2°65.9°
C2C1O1C4'136.8°164.8°
C2C3C4C559.5°53.7°
C2C3C4O4179.8°173.6°
C2C3C4O3119.9°120.0°
C2C3C4H31121.1°119.7°
C2C3C4H4160.4°66.2°
C3C2O2HO2159.0°180.0°
C3C2C1O155.3°58.8°
C3C2C1O557.9°61.3°
C3C2C1H11179.6°178.6°
C2C3O3H31121.1°120.5°
C2C3O3HO31180.0°60.8°
H21C2C3C460.9°66.2°
H21C2O2HO2161.7°59.9°
H21C2C1O1175.9°178.7°
H21C2C1O562.7°58.6°
H21C2C1H1159.8°61.4°
H21C2C3O361.4°53.6°
H21C2C3H31179.6°174.1°
C5C4O4C3118.1°119.5°
C5C4O4H41120.0°120.3°
C5C4C3H41119.9°119.9°
C4C5C6O5117.2°120.3°
C4C5C6H51120.0°119.9°
C4C5O5H51119.9°120.2°
C4C5C6O654.6°179.7°
C4C5C6H61179.8°59.7°
C4C5C6H6270.7°60.3°
C5C4O4HO41180.0°180.0°
C4C5O5C162.0°67.6°
C5C4C3O3179.4°173.7°
C5C4C3H3161.6°66.0°
O4C4C3H41119.4°120.2°
O4C4C5C667.3°58.8°
O4C4C5O5178.7°178.8°
O4C4C5H5155.6°61.1°
O4C4C3O359.9°66.4°
O4C4C3H3159.1°53.9°
C3C4C5C6174.0°178.7°
C3C4C5O560.0°61.2°
C3C4C5H5163.1°58.9°
C3C4O4HO4161.8°60.5°
C4C3O3H31118.7°120.3°
C4C3O3HO3159.8°180.0°
H41C4C5C652.2°61.5°
H41C4C5O561.8°58.6°
H41C4C5H51175.0°178.7°
H41C4O4HO4160.0°59.7°
H41C4C3O359.5°53.8°
H41C4C3H31178.5°174.1°
C6C5O5H51122.4°119.8°
C5C6O6H61125.3°120.0°
C5C6O6H62125.3°120.0°
C5C6H61H62115.4°120.0°
C6C5O5C1179.6°172.4°
C5C6O6HO61179.9°180.0°
O5C5C6O662.6°60.0°
O5C5C6H6162.6°180.0°
O5C5C6H62172.1°60.0°
C5O5C1O155.7°52.6°
C5O5C1H11179.7°172.4°
H51C5C6O6174.6°59.8°
H51C5C6H6160.2°60.2°
H51C5C6H6249.3°179.8°
H51C5O5C158.0°52.6°
O6C6H61H62115.4°120.0°
H61C6O6HO6154.7°60.0°
H62C6O6HO6154.8°60.0°
O1C1O5H11124.0°119.8°
C1O1C4'C3'112.1°85.5°
C1O1C4'C5'133.6°154.9°
C1O1C4'H4'110.3°34.7°
O5C1O1C4'105.5°74.9°
H11C1O1C4'16.5°44.9°
H31C3O3HO3158.9°59.7°
O1C4'C3'C2'179.5°173.7°
O1C4'C3'C5'117.3°120.0°
O1C4'C3'H4'1119.7°120.2°
O1C4'C3'O3'61.3°66.4°
O1C4'C3'H3'158.3°53.9°
O1C4'C5'H4'1119.6°120.2°
O1C4'C5'C6'64.1°58.7°
O1C4'C5'O5'179.4°178.8°
O1C4'C5'H5'158.0°61.1°
C2'C1'O1'O5'124.7°120.3°
C2'C1'O1'H1'1117.5°119.8°
C2'C1'O5'H1'1117.7°120.0°
C1'C2'C3'O2'118.3°119.9°
C1'C2'C3'H2'1123.3°120.0°
C1'C2'O2'H2'1123.3°120.3°
C1'C2'C3'C4'59.7°53.8°
C1'C2'C3'O3'177.1°173.6°
C1'C2'C3'H3'157.3°66.0°
C2'C1'O5'C5'62.3°67.6°
C2'C1'O1'CA126.5°179.9°
C1'C2'O2'HO2'180.0°60.5°
O1'C1'O5'H1'1116.6°119.9°
O1'C1'C2'C3'178.6°178.6°
O1'C1'C2'O2'56.9°58.7°
O1'C1'C2'H2'161.4°61.5°
O1'C1'O5'C5'172.0°172.4°
C1'O1'CACB159.7°180.0°
C1'O1'CAHA175.1°59.9°
C1'O1'CAHA234.4°60.0°
O5'C1'C2'C3'56.0°61.3°
O5'C1'C2'O2'177.6°178.8°
O5'C1'C2'H2'164.1°58.6°
C1'O5'C5'C4'64.6°67.6°
C1'O5'C5'C6'179.5°172.4°
C1'O5'C5'H5'157.3°52.6°
O5'C1'O1'CA108.8°59.8°
H1'1C1'C2'C3'62.0°58.7°
H1'1C1'C2'O2'59.6°61.2°
H1'1C1'C2'H2'1177.9°178.6°
H1'1C1'O5'C5'55.4°52.4°
H1'1C1'O1'CA9.0°60.0°
C3'C2'O2'H2'1120.2°120.2°
C2'C3'C4'O3'119.2°119.9°
C2'C3'C4'H3'1121.2°119.8°
C2'C3'O3'H3'1121.3°120.5°
C2'C3'C4'C5'62.2°53.7°
C2'C3'C4'H4'160.8°66.1°
C2'C3'O3'HO3'180.0°60.8°
C3'C2'O2'HO2'63.5°180.0°
O2'C2'C3'C4'178.0°173.6°
O2'C2'C3'O3'58.8°66.5°
O2'C2'C3'H3'161.0°53.9°
H2'1C2'C3'C4'63.6°66.2°
H2'1C2'C3'O3'59.6°53.6°
H2'1C2'C3'H3'1179.4°174.1°
H2'1C2'O2'HO2'56.7°59.8°
C4'C3'O3'H3'1117.0°120.2°
C3'C4'C5'H4'1121.9°119.8°
C3'C4'C5'C6'177.4°178.7°
C3'C4'C5'O5'60.9°61.2°
C3'C4'C5'H5'160.5°58.9°
C4'C3'O3'HO3'58.3°180.0°
O3'C3'C4'C5'178.6°173.6°
O3'C3'C4'H4'158.4°53.8°
H3'1C3'C4'C5'59.0°66.2°
H3'1C3'C4'H4'1178.0°174.1°
H3'1C3'O3'HO3'58.7°59.7°
C4'C5'C6'O5'116.8°120.4°
C4'C5'C6'H5'1121.9°119.8°
C4'C5'O5'H5'1121.9°120.1°
C4'C5'C6'O6'177.6°176.2°
C4'C5'C6'H6'157.1°56.2°
C4'C5'C6'H6'252.4°63.8°
H4'1C4'C5'C6'55.5°61.5°
H4'1C4'C5'O5'61.0°58.6°
H4'1C4'C5'H5'1177.6°178.7°
C6'C5'O5'H5'1122.1°119.8°
C5'C6'O6'H6'1125.3°120.0°
C5'C6'O6'H6'2125.2°120.0°
C5'C6'H6'1H6'2118.2°120.0°
C5'C6'O6'HO6'180.0°179.9°
O5'C5'C6'O6'60.9°63.4°
O5'C5'C6'H6'1173.8°176.6°
O5'C5'C6'H6'264.4°56.6°
H5'1C5'C6'O6'60.5°56.4°
H5'1C5'C6'H6'164.8°63.6°
H5'1C5'C6'H6'2174.2°176.4°
O6'C6'H6'1H6'2118.3°120.0°
H6'1C6'O6'HO6'54.7°59.9°
H6'2C6'O6'HO6'54.7°60.0°
O1'CACBHA1125.2°120.1°
O1'CACBHA2125.3°120.0°
O1'CAHA1HA2115.1°120.0°
O1'CACBCC0.4°180.0°
O1'CACBHB1125.7°60.0°
O1'CACBHB2124.8°60.0°
CBCAHA1HA2115.1°119.9°
CACBCCHB1125.3°120.0°
CACBCCHB2125.3°120.0°
CACBHB1HB2115.2°120.0°
CACBCCCD179.7°180.0°
CACBCCHC154.5°59.9°
CACBCCHC255.1°60.0°
HA1CACBCC124.8°59.9°
HA1CACBHB10.4°180.0°
HA1CACBHB2109.9°60.1°
HA2CACBCC125.7°60.0°
HA2CACBHB1109.1°60.0°
HA2CACBHB20.4°180.0°
CCCBHB1HB2115.1°120.0°
CBCCCDHC1125.3°120.1°
CBCCCDHC2125.3°120.0°
CBCCHC1HC2119.4°120.0°
CBCCCDCF179.9°180.0°
CBCCCDHD154.9°60.0°
CBCCCDHD254.7°60.0°
HB1CBCCCD55.0°59.9°
HB1CBCCHC1179.7°180.0°
HB1CBCCHC270.2°60.0°
HB2CBCCCD54.4°60.0°
HB2CBCCHC170.8°60.1°
HB2CBCCHC2179.7°180.0°
CDCCHC1HC2119.2°119.9°
CCCDCFHD1125.3°120.0°
CCCDCFHD2125.3°120.0°
CCCDHD1HD2117.0°120.0°
CCCDCFCG179.8°180.0°
CCCDCFHF154.5°59.9°
CCCDCFHF255.0°60.0°
HC1CCCDCF54.6°59.9°
HC1CCCDHD1179.8°179.9°
HC1CCCDHD270.7°60.1°
HC2CCCDCF54.8°60.0°
HC2CCCDHD170.4°60.0°
HC2CCCDHD2179.9°180.0°
CFCDHD1HD2116.8°120.0°
CDCFCGHF1125.3°120.0°
CDCFCGHF2125.3°120.1°
CDCFHF1HF2117.3°120.0°
CDCFCGCH74.6°180.0°
CDCFCGHG150.6°60.0°
CDCFCGHG2160.1°60.0°
HD1CDCFCG54.9°60.0°
HD1CDCFHF1179.8°180.0°
HD1CDCFHF270.3°60.0°
HD2CDCFCG54.5°60.0°
HD2CDCFHF170.8°60.0°
HD2CDCFHF2179.7°180.0°
CGCFHF1HF2117.2°119.9°
CFCGCHHG1125.3°120.0°
CFCGCHHG2125.3°120.0°
CFCGHG1HG2116.5°119.9°
CFCGCHCI114.2°180.0°
CFCGCHHH111.1°60.0°
CFCGCHHH2120.6°60.0°
HF1CFCGCH160.1°60.0°
HF1CFCGHG174.7°180.0°
HF1CFCGHG234.8°60.1°
HF2CFCGCH50.6°59.9°
HF2CFCGHG1175.9°60.1°
HF2CFCGHG274.6°179.9°
CHCGHG1HG2116.5°120.0°
CGCHCIHH1125.3°120.0°
CGCHCIHH2125.3°119.9°
CGCHHH1HH2117.4°119.9°
CGCHCICJ58.3°180.0°
CGCHCIHI167.0°60.0°
CGCHCIHI2176.4°60.0°
HG1CGCHCI120.6°59.9°
HG1CGCHHH1114.2°180.0°
HG1CGCHHH24.7°60.0°
HG2CGCHCI11.1°60.0°
HG2CGCHHH1136.4°60.0°
HG2CGCHHH2114.1°180.0°
CICHHH1HH2117.4°120.0°
CHCICJHI1125.3°120.1°
CHCICJHI2125.3°120.0°
CHCIHI1HI2116.8°120.0°
CHCICJCK179.9°180.0°
CHCICJHJ154.8°59.9°
CHCICJHJ254.7°60.0°
HH1CHCICJ176.4°60.0°
HH1CHCIHI158.3°179.9°
HH1CHCIHI251.2°60.0°
HH2CHCICJ67.0°60.1°
HH2CHCIHI1167.8°60.0°
HH2CHCIHI258.3°179.9°
CJCIHI1HI2116.7°120.0°
CICJCKHJ1125.3°120.0°
CICJCKHJ2125.3°120.0°
CICJHJ1HJ2117.6°120.0°
CICJCKCL113.1°180.0°
CICJCKHK112.2°59.9°
CICJCKHK2121.7°60.1°
HI1CICJCK54.6°59.9°
HI1CICJHJ1179.9°180.0°
HI1CICJHJ270.6°60.1°
HI2CICJCK54.8°60.0°
HI2CICJHJ170.5°60.0°
HI2CICJHJ2180.0°180.0°
CKCJHJ1HJ2117.6°120.0°
CJCKCLHK1125.3°120.1°
CJCKCLHK2125.3°119.9°
CJCKHK1HK2117.2°120.0°
CJCKCLHL1180.0°179.9°
CJCKCLHL254.8°60.0°
CJCKCLHL354.8°59.9°
HJ1CJCKCL121.6°60.0°
HJ1CJCKHK1113.1°180.0°
HJ1CJCKHK23.6°60.0°
HJ2CJCKCL12.2°60.0°
HJ2CJCKHK1137.5°60.0°
HJ2CJCKHK2113.1°180.0°
CLCKHK1HK2117.2°119.9°
CKCLHL1HL2125.3°120.0°
CKCLHL1HL3125.3°120.0°
CKCLHL2HL3117.3°120.0°
HK1CKCLHL154.7°60.0°
HK1CKCLHL2179.9°60.1°
HK1CKCLHL370.5°180.0°
HK2CKCLHL154.7°60.0°
HK2CKCLHL270.5°180.0°
HK2CKCLHL3179.9°60.0°
HL1CLHL2HL3117.2°120.0°

222415

PDB entries from 2024-07-10

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