ULF
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OP1 | P | doub | 1.48Å | 1.64Å | |
| C8' | C4' | sing | 1.56Å | 1.50Å | |
| C8' | C6' | sing | 1.55Å | 1.52Å | |
| C5' | C4' | sing | 1.53Å | 1.50Å | |
| C5' | O5' | sing | 1.43Å | 1.42Å | |
| P | O5' | sing | 1.61Å | 1.54Å | |
| P | OP2 | sing | 1.61Å | 1.61Å | |
| C4' | O4' | sing | 1.49Å | 1.44Å | |
| C4' | C3' | sing | 1.57Å | 1.51Å | |
| F7' | C6' | sing | 1.40Å | 1.39Å | |
| O4' | C1' | sing | 1.44Å | 1.43Å | |
| C6' | C2' | sing | 1.56Å | 1.52Å | |
| O3' | C3' | sing | 1.43Å | 1.43Å | |
| C3' | C2' | sing | 1.57Å | 1.48Å | |
| C1' | C2' | sing | 1.56Å | 1.54Å | |
| C1' | N1 | sing | 1.46Å | 1.47Å | |
| N1 | C6 | sing | 1.37Å | 1.34Å | |
| N1 | C2 | sing | 1.35Å | 1.34Å | |
| C6 | C5 | doub | 1.35Å | 1.37Å | |
| O2 | C2 | doub | 1.22Å | 1.33Å | |
| C2 | N3 | sing | 1.35Å | 1.34Å | |
| C5 | C4 | sing | 1.42Å | 1.40Å | |
| N3 | C4 | sing | 1.35Å | 1.31Å | |
| C4 | O4 | doub | 1.22Å | 1.34Å | |
| C6' | H1 | sing | 1.09Å | 1.10Å | |
| C8' | H2 | sing | 1.09Å | 1.10Å | |
| C8' | H3 | sing | 1.09Å | 1.10Å | |
| C2' | H4 | sing | 1.09Å | 1.10Å | |
| C3' | H5 | sing | 1.09Å | 1.10Å | |
| O3' | H6 | sing | 0.97Å | 0.95Å | |
| C1' | H7 | sing | 1.09Å | 1.10Å | |
| C5' | H8 | sing | 1.09Å | 1.10Å | |
| C5' | H9 | sing | 1.09Å | 1.10Å | |
| C6 | H12 | sing | 1.08Å | 1.08Å | |
| C5 | H13 | sing | 1.08Å | 1.08Å | |
| N3 | H14 | sing | 0.97Å | 1.00Å | |
| P | OP3 | sing | 1.61Å | 11.71Å | |
| OP3 | H10 | sing | 0.97Å | 0.00Å | |
| OP2 | H11 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | O5' | 107.3° | 109.5° |
| OP1 | P | OP2 | 117.1° | 109.4° |
| OP1 | P | OP3 | 126.7° | 109.5° |
| C4' | C8' | C6' | 98.7° | 104.4° |
| C8' | C4' | C5' | 111.1° | 115.6° |
| C8' | C4' | O4' | 108.0° | 104.0° |
| C8' | C4' | C3' | 102.7° | 100.7° |
| C4' | C8' | H2 | 112.1° | 110.4° |
| C4' | C8' | H3 | 112.1° | 110.4° |
| C8' | C6' | F7' | 107.2° | 110.6° |
| C8' | C6' | C2' | 105.5° | 103.9° |
| C8' | C6' | H1 | 110.4° | 110.7° |
| C6' | C8' | H2 | 112.1° | 110.4° |
| C6' | C8' | H3 | 112.1° | 110.5° |
| C4' | C5' | O5' | 106.3° | 109.5° |
| C5' | C4' | O4' | 111.9° | 116.3° |
| C5' | C4' | C3' | 116.9° | 116.5° |
| C4' | C5' | H8 | 110.3° | 109.5° |
| C4' | C5' | H9 | 110.2° | 109.5° |
| C5' | O5' | P | 115.9° | 123.0° |
| O5' | C5' | H8 | 110.3° | 109.4° |
| O5' | C5' | H9 | 110.3° | 109.4° |
| O5' | P | OP2 | 106.2° | 109.5° |
| O5' | P | OP3 | 87.5° | 109.5° |
| OP2 | P | OP3 | 106.3° | 109.4° |
| P | OP2 | H11 | 109.5° | 114.0° |
| O4' | C4' | C3' | 105.5° | 101.4° |
| C4' | O4' | C1' | 105.1° | 107.6° |
| C4' | C3' | O3' | 113.3° | 112.4° |
| C4' | C3' | C2' | 92.4° | 94.6° |
| C4' | C3' | H5 | 111.7° | 112.3° |
| F7' | C6' | C2' | 110.4° | 110.5° |
| F7' | C6' | H1 | 112.5° | 110.4° |
| O4' | C1' | C2' | 103.1° | 105.5° |
| O4' | C1' | N1 | 110.5° | 110.3° |
| O4' | C1' | H7 | 109.9° | 110.3° |
| C6' | C2' | C3' | 97.5° | 100.4° |
| C6' | C2' | C1' | 110.1° | 103.6° |
| C2' | C6' | H1 | 110.5° | 110.6° |
| C6' | C2' | H4 | 115.3° | 116.6° |
| O3' | C3' | C2' | 112.4° | 112.3° |
| O3' | C3' | H5 | 113.1° | 111.9° |
| C3' | O3' | H6 | 109.5° | 114.0° |
| C3' | C2' | C1' | 100.9° | 99.7° |
| C3' | C2' | H4 | 116.0° | 117.0° |
| C2' | C3' | H5 | 112.2° | 112.3° |
| C2' | C1' | N1 | 115.2° | 110.3° |
| C1' | C2' | H4 | 114.9° | 116.7° |
| C2' | C1' | H7 | 108.5° | 110.2° |
| C1' | N1 | C6 | 122.3° | 119.7° |
| C1' | N1 | C2 | 118.0° | 119.7° |
| N1 | C1' | H7 | 109.4° | 110.2° |
| C6 | N1 | C2 | 119.7° | 120.6° |
| N1 | C6 | C5 | 121.5° | 119.7° |
| N1 | C6 | H12 | 119.2° | 120.1° |
| N1 | C2 | O2 | 119.4° | 119.6° |
| N1 | C2 | N3 | 120.4° | 120.9° |
| C6 | C5 | C4 | 116.4° | 119.1° |
| C5 | C6 | H12 | 119.2° | 120.2° |
| C6 | C5 | H13 | 121.8° | 120.4° |
| O2 | C2 | N3 | 120.2° | 119.5° |
| C2 | N3 | C4 | 121.0° | 120.2° |
| C2 | N3 | H14 | 119.5° | 119.9° |
| C5 | C4 | N3 | 120.9° | 119.4° |
| C5 | C4 | O4 | 120.3° | 120.3° |
| C4 | C5 | H13 | 121.8° | 120.5° |
| N3 | C4 | O4 | 118.7° | 120.3° |
| C4 | N3 | H14 | 119.5° | 119.9° |
| H2 | C8' | H3 | 109.4° | 110.5° |
| H8 | C5' | H9 | 109.4° | 109.4° |
| P | OP3 | H10 | 90.0° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | O5' | C5' | 56.0° | 55.0° |
| OP1 | P | O5' | OP2 | 126.0° | 120.0° |
| OP1 | P | O5' | OP3 | 127.8° | 120.0° |
| OP1 | P | OP2 | OP3 | 148.1° | 119.9° |
| OP1 | P | OP3 | H10 | 90.0° | 180.0° |
| OP1 | P | OP2 | H11 | 0.0° | 60.0° |
| C4' | C8' | C6' | H2 | 118.2° | 118.7° |
| C4' | C8' | C6' | H3 | 118.2° | 118.7° |
| C8' | C4' | C5' | O4' | 120.8° | 122.4° |
| C8' | C4' | C5' | C3' | 117.4° | 118.1° |
| C8' | C4' | C5' | O5' | 165.7° | 56.1° |
| C8' | C4' | O4' | C3' | 109.2° | 104.2° |
| C4' | C8' | C6' | F7' | 120.8° | 120.0° |
| C8' | C4' | O4' | C1' | 79.7° | 70.0° |
| C4' | C8' | C6' | C2' | 3.1° | 1.4° |
| C8' | C4' | C3' | O3' | 54.6° | 61.5° |
| C8' | C4' | C3' | C2' | 61.1° | 54.9° |
| C4' | C8' | C6' | H1 | 116.3° | 117.3° |
| C4' | C8' | H2 | H3 | 125.0° | 122.5° |
| C8' | C4' | C3' | H5 | 176.2° | 171.2° |
| C8' | C4' | C5' | H8 | 74.7° | 63.9° |
| C8' | C4' | C5' | H9 | 46.2° | 176.1° |
| C6' | C8' | C4' | C5' | 160.9° | 160.5° |
| C6' | C8' | C4' | O4' | 76.0° | 70.7° |
| C6' | C8' | C4' | C3' | 35.2° | 34.0° |
| C8' | C6' | F7' | C2' | 114.5° | 114.5° |
| C8' | C6' | F7' | H1 | 121.6° | 122.9° |
| C8' | C6' | C2' | H1 | 119.4° | 118.8° |
| C8' | C6' | C2' | C3' | 40.9° | 36.2° |
| C8' | C6' | C2' | C1' | 63.7° | 66.6° |
| C6' | C8' | H2 | H3 | 125.0° | 122.6° |
| C8' | C6' | C2' | H4 | 164.3° | 163.7° |
| C4' | C5' | O5' | H8 | 119.5° | 120.1° |
| C4' | C5' | O5' | H9 | 119.5° | 120.0° |
| C4' | C5' | O5' | P | 156.0° | 180.0° |
| C5' | C4' | O4' | C3' | 128.2° | 127.4° |
| C5' | C4' | O4' | C1' | 157.7° | 161.6° |
| C5' | C4' | C3' | O3' | 67.3° | 64.4° |
| C5' | C4' | C3' | C2' | 177.0° | 179.2° |
| C5' | C4' | C8' | H2 | 42.7° | 80.7° |
| C5' | C4' | C8' | H3 | 80.8° | 41.8° |
| C5' | C4' | C3' | H5 | 61.9° | 62.8° |
| C4' | C5' | H8 | H9 | 121.4° | 120.0° |
| C5' | O5' | P | OP2 | 178.0° | 175.0° |
| O5' | C5' | C4' | O4' | 73.5° | 66.4° |
| O5' | C5' | C4' | C3' | 48.4° | 174.1° |
| O5' | C5' | H8 | H9 | 121.5° | 119.9° |
| C5' | O5' | P | OP3 | 71.8° | 65.0° |
| O5' | P | OP2 | OP3 | 92.1° | 120.0° |
| P | O5' | C5' | H8 | 36.5° | 59.9° |
| P | O5' | C5' | H9 | 84.5° | 60.0° |
| O5' | P | OP3 | H10 | 90.0° | 59.9° |
| O5' | P | OP2 | H11 | 119.7° | 180.0° |
| OP2 | P | OP3 | H10 | 90.0° | 60.1° |
| O4' | C4' | C3' | O3' | 167.6° | 168.3° |
| O4' | C4' | C3' | C2' | 51.9° | 51.9° |
| C4' | O4' | C1' | C2' | 5.4° | 0.9° |
| C4' | O4' | C1' | N1 | 118.2° | 119.9° |
| O4' | C4' | C8' | H2 | 165.8° | 48.0° |
| O4' | C4' | C8' | H3 | 42.2° | 170.6° |
| O4' | C4' | C3' | H5 | 63.2° | 64.4° |
| C4' | O4' | C1' | H7 | 120.9° | 118.1° |
| O4' | C4' | C5' | H8 | 46.1° | 173.6° |
| O4' | C4' | C5' | H9 | 167.0° | 53.6° |
| C3' | C4' | O4' | C1' | 29.5° | 34.2° |
| C4' | C3' | C2' | C6' | 59.5° | 55.8° |
| C4' | C3' | O3' | C2' | 103.2° | 105.2° |
| C4' | C3' | O3' | H5 | 128.4° | 127.4° |
| C4' | C3' | C2' | H5 | 114.6° | 116.4° |
| C4' | C3' | C2' | C1' | 52.8° | 50.2° |
| C3' | C4' | C8' | H2 | 83.0° | 152.8° |
| C3' | C4' | C8' | H3 | 153.4° | 84.7° |
| C4' | C3' | C2' | H4 | 177.6° | 177.0° |
| C4' | C3' | O3' | H6 | 180.0° | 166.7° |
| C3' | C4' | C5' | H8 | 167.9° | 54.1° |
| C3' | C4' | C5' | H9 | 71.2° | 65.9° |
| F7' | C6' | C2' | H1 | 125.1° | 122.6° |
| F7' | C6' | C2' | C3' | 156.4° | 154.8° |
| F7' | C6' | C2' | C1' | 51.8° | 52.1° |
| F7' | C6' | C8' | H2 | 120.9° | 1.3° |
| F7' | C6' | C8' | H3 | 2.6° | 121.3° |
| F7' | C6' | C2' | H4 | 80.1° | 77.7° |
| O4' | C1' | C2' | C6' | 63.2° | 70.7° |
| O4' | C1' | C2' | C3' | 39.1° | 32.5° |
| O4' | C1' | C2' | N1 | 120.5° | 119.1° |
| O4' | C1' | C2' | H7 | 116.5° | 119.1° |
| O4' | C1' | N1 | H7 | 121.2° | 122.0° |
| O4' | C1' | N1 | C6 | 20.6° | 21.4° |
| O4' | C1' | N1 | C2 | 157.8° | 159.0° |
| O4' | C1' | C2' | H4 | 164.7° | 159.6° |
| C6' | C2' | C3' | O3' | 57.0° | 60.7° |
| C6' | C2' | C3' | C1' | 112.3° | 105.9° |
| C6' | C2' | C3' | H4 | 122.9° | 127.2° |
| C6' | C2' | C1' | H4 | 132.1° | 129.7° |
| C6' | C2' | C1' | N1 | 176.4° | 170.2° |
| C2' | C6' | C8' | H2 | 121.4° | 117.3° |
| C2' | C6' | C8' | H3 | 115.1° | 120.1° |
| C6' | C2' | C3' | H5 | 174.1° | 172.1° |
| C6' | C2' | C1' | H7 | 53.4° | 48.4° |
| O3' | C3' | C2' | H5 | 128.9° | 127.1° |
| O3' | C3' | C2' | C1' | 169.2° | 166.7° |
| O3' | C3' | C2' | H4 | 65.9° | 66.5° |
| C3' | C2' | C1' | H4 | 125.6° | 127.0° |
| C3' | C2' | C1' | N1 | 81.4° | 86.5° |
| C3' | C2' | C6' | H1 | 78.5° | 82.6° |
| C2' | C3' | O3' | H6 | 76.8° | 61.5° |
| C3' | C2' | C1' | H7 | 155.7° | 151.6° |
| C2' | C1' | N1 | H7 | 122.5° | 121.9° |
| C2' | C1' | N1 | C6 | 95.8° | 94.7° |
| C2' | C1' | N1 | C2 | 85.8° | 84.9° |
| C1' | C2' | C6' | H1 | 176.9° | 174.7° |
| C1' | C2' | C3' | H5 | 61.9° | 66.2° |
| C1' | N1 | C6 | C2 | 178.4° | 179.6° |
| C1' | N1 | C6 | C5 | 178.1° | 179.9° |
| C1' | N1 | C2 | O2 | 1.4° | 0.1° |
| C1' | N1 | C2 | N3 | 178.4° | 179.8° |
| N1 | C1' | C2' | H4 | 44.2° | 40.5° |
| C1' | N1 | C6 | H12 | 1.9° | 0.1° |
| N1 | C6 | C5 | H12 | 180.0° | 179.9° |
| C6 | N1 | C2 | O2 | 179.9° | 179.7° |
| C6 | N1 | C2 | N3 | 0.1° | 0.6° |
| N1 | C6 | C5 | C4 | 0.1° | 0.0° |
| C6 | N1 | C1' | H7 | 141.7° | 143.4° |
| N1 | C6 | C5 | H13 | 179.9° | 179.9° |
| C2 | N1 | C6 | C5 | 0.3° | 0.3° |
| N1 | C2 | O2 | N3 | 179.8° | 179.7° |
| N1 | C2 | N3 | C4 | 0.2° | 0.6° |
| C2 | N1 | C1' | H7 | 36.7° | 36.9° |
| C2 | N1 | C6 | H12 | 179.7° | 179.8° |
| N1 | C2 | N3 | H14 | 179.8° | 179.7° |
| C6 | C5 | C4 | H13 | 180.0° | 179.9° |
| C6 | C5 | C4 | N3 | 0.1° | 0.1° |
| C6 | C5 | C4 | O4 | 179.0° | 180.0° |
| O2 | C2 | N3 | C4 | 179.6° | 179.8° |
| O2 | C2 | N3 | H14 | 0.4° | 0.1° |
| C2 | N3 | C4 | C5 | 0.3° | 0.2° |
| C2 | N3 | C4 | H14 | 180.0° | 179.7° |
| C2 | N3 | C4 | O4 | 179.2° | 179.7° |
| C5 | C4 | N3 | O4 | 178.9° | 179.9° |
| C4 | C5 | C6 | H12 | 179.9° | 179.9° |
| C5 | C4 | N3 | H14 | 179.7° | 179.9° |
| N3 | C4 | C5 | H13 | 179.8° | 180.0° |
| O4 | C4 | C5 | H13 | 1.0° | 0.1° |
| O4 | C4 | N3 | H14 | 0.8° | 0.0° |
| H1 | C6' | C8' | H2 | 1.9° | 124.0° |
| H1 | C6' | C8' | H3 | 125.5° | 1.4° |
| H1 | C6' | C2' | H4 | 44.9° | 44.9° |
| H4 | C2' | C3' | H5 | 63.0° | 60.6° |
| H4 | C2' | C1' | H7 | 78.8° | 81.3° |
| H5 | C3' | O3' | H6 | 51.6° | 65.8° |
| H12 | C6 | C5 | H13 | 0.1° | 0.0° |
| OP3 | P | OP2 | H11 | 148.1° | 60.0° |
