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SummaryGeometryRelated PDB entries

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Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C06C07sing1.56Å1.52Å
C06S05sing1.84Å1.80Å
C07C08sing1.53Å1.53Å
O01C02doub1.21Å1.25Å
S05C04sing1.83Å1.84Å
C02O03sing1.34Å1.26Å
C02C04sing1.51Å1.55Å
C08C04sing1.54Å1.52Å
C04H1sing1.09Å1.10Å
C06H2sing1.09Å1.10Å
C06H3sing1.09Å1.10Å
C07H4sing1.09Å1.10Å
C07H5sing1.09Å1.10Å
C08H6sing1.09Å1.10Å
C08H7sing1.09Å1.10Å
O03H8sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C07C06S05109.4°100.9°
C06C07C08111.8°108.9°
C07C06H2109.5°111.1°
C07C06H3109.5°111.1°
C06C07H4108.9°109.6°
C06C07H5108.9°109.6°
C06S05C0494.8°95.8°
S05C06H2109.5°111.0°
S05C06H3109.5°111.2°
C07C08C04112.5°112.5°
C08C07H4108.9°109.6°
C08C07H5108.9°109.7°
C07C08H6108.7°108.9°
C07C08H7108.7°108.9°
O01C02O03126.0°120.0°
O01C02C04119.7°120.0°
S05C04C02114.6°110.3°
S05C04C08107.1°105.1°
S05C04H1106.2°110.4°
O03C02C04114.4°120.0°
C02O03H8109.5°117.0°
C02C04C08109.8°110.3°
C02C04H1109.3°110.3°
C08C04H1109.7°110.4°
C04C08H6108.7°108.9°
C04C08H7108.7°108.9°
H2C06H3109.5°111.1°
H4C07H5109.5°109.4°
H6C08H7109.4°108.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C07C06S05H2120.0°117.9°
C07C06S05H3120.0°117.9°
C06C07C08H4120.3°119.9°
C06C07C08H5120.4°119.9°
C07C06S05C0417.2°35.3°
C06C07C08C045.7°30.1°
C07C06H2H3120.1°124.3°
C06C07H4H5118.9°120.2°
C06C07C08H6126.2°90.7°
C06C07C08H7114.7°150.9°
S05C06C07C089.4°41.4°
C06S05C04C02101.9°138.6°
C06S05C04C0820.1°19.7°
C06S05C04H1137.3°99.3°
S05C06H2H3120.0°124.3°
S05C06C07H4129.7°78.5°
S05C06C07H5111.0°161.4°
C07C08C04S0517.7°2.9°
C07C08C04C02107.3°116.0°
C07C08C04H6120.5°120.8°
C07C08C04H7120.5°120.8°
C07C08C04H1132.6°121.9°
C08C07C06H2129.3°76.4°
C08C07C06H3110.6°159.3°
C08C07H4H5118.9°120.3°
C07C08H6H7118.6°118.5°
O01C02C04S0598.7°87.4°
O01C02O03C04179.9°179.7°
O01C02C04C0821.9°28.3°
O01C02C04H1142.3°150.4°
O01C02O03H80.0°0.2°
S05C04C02O0381.2°92.9°
S05C04C02C08120.6°115.7°
S05C04C02H1119.1°122.2°
S05C04C08H1114.9°119.0°
C04S05C06H2137.2°82.6°
C04S05C06H3102.7°153.2°
S05C04C08H6138.2°117.9°
S05C04C08H7102.8°123.7°
O03C02C04C08158.2°151.5°
O03C02C04H137.9°29.3°
C02C04C08H1120.1°122.1°
C02C04C08H613.2°123.2°
C02C04C08H7132.2°4.8°
C04C02O03H8179.9°179.9°
C04C08C07H4114.6°89.8°
C04C08C07H5126.1°150.0°
C04C08H6H7118.6°118.5°
H1C04C08H6106.9°1.1°
H1C04C08H712.1°117.3°
H2C06C07H4110.3°163.7°
H2C06C07H59.0°43.5°
H3C06C07H49.7°39.4°
H3C06C07H5129.0°80.7°
H4C07C08H65.9°149.4°
H4C07C08H7124.9°30.9°
H5C07C08H6113.4°29.2°
H5C07C08H75.6°89.2°

222415

PDB entries from 2024-07-10

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