UFT

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
OP3	P	sing	1.61Å	1.61Å
OP1	P	doub	1.48Å	1.47Å
P	OP2	sing	1.61Å	1.49Å
P	O5'	sing	1.61Å	1.60Å
OP3	HOP3	sing	0.97Å	0.95Å
OP2	HOP2	sing	0.97Å	0.95Å
O5'	C5'	sing	1.43Å	1.43Å
C6	N1	sing	1.37Å	1.39Å
N1	C2	sing	1.35Å	1.40Å
N1	C1'	sing	1.46Å	1.48Å
C5	C6	doub	1.35Å	1.34Å
C6	H6	sing	1.08Å	1.08Å
N3	C2	sing	1.35Å	1.38Å
C2	O2	doub	1.22Å	1.23Å
C4	N3	sing	1.35Å	1.39Å
O4	C4	doub	1.22Å	1.24Å
C5	C4	sing	1.42Å	1.44Å
C5	H5	sing	1.08Å	1.08Å
C2'	F2'	sing	1.40Å	1.37Å
C3'	C2'	sing	1.54Å	1.53Å
C2'	C1'	sing	1.54Å	1.53Å
C2'	H2'	sing	1.09Å	1.10Å
C5'	C4'	sing	1.53Å	1.51Å
C5'	H5'	sing	1.09Å	1.10Å
C5'	H5'A	sing	1.09Å	1.10Å
C3'	C4'	sing	1.54Å	1.52Å
C4'	O4'	sing	1.44Å	1.45Å
C4'	H4'	sing	1.09Å	1.10Å
O4'	C1'	sing	1.44Å	1.42Å
C1'	H1'	sing	1.09Å	1.10Å
C3'	O3'	sing	1.43Å	1.43Å
C3'	H3'	sing	1.09Å	1.10Å
O3'	HO3'	sing	0.97Å	0.95Å
N3	HN3	sing	0.97Å	1.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
OP3	P	OP1	104.2°	109.5°
OP3	P	OP2	111.1°	109.5°
OP3	P	O5'	103.1°	109.5°
P	OP3	HOP3	109.5°	114.0°
OP1	P	OP2	119.3°	109.5°
OP1	P	O5'	109.4°	109.5°
OP2	P	O5'	108.5°	109.4°
P	OP2	HOP2	109.5°	114.0°
P	O5'	C5'	120.6°	123.0°
O5'	C5'	C4'	110.8°	109.5°
O5'	C5'	H5'	109.0°	109.5°
O5'	C5'	H5'A	108.7°	109.5°
C6	N1	C2	120.5°	120.6°
C6	N1	C1'	121.5°	119.7°
N1	C6	C5	123.0°	119.7°
N1	C6	H6	118.5°	120.1°
C2	N1	C1'	118.0°	119.7°
N1	C2	N3	114.9°	121.0°
N1	C2	O2	123.2°	119.5°
N1	C1'	C2'	112.5°	110.4°
N1	C1'	O4'	109.0°	110.3°
N1	C1'	H1'	107.1°	110.3°
C5	C6	H6	118.5°	120.2°
C6	C5	C4	119.8°	119.1°
C6	C5	H5	120.1°	120.5°
N3	C2	O2	121.9°	119.5°
C2	N3	C4	127.3°	120.2°
C2	N3	HN3	116.3°	119.9°
N3	C4	O4	119.5°	120.3°
N3	C4	C5	114.6°	119.4°
C4	N3	HN3	116.4°	119.9°
O4	C4	C5	125.9°	120.3°
C4	C5	H5	120.1°	120.4°
F2'	C2'	C3'	113.0°	110.5°
F2'	C2'	C1'	107.0°	110.5°
F2'	C2'	H2'	106.6°	110.4°
C3'	C2'	C1'	101.6°	104.1°
C3'	C2'	H2'	111.6°	110.7°
C2'	C3'	C4'	101.8°	104.1°
C2'	C3'	O3'	115.2°	110.5°
C2'	C3'	H3'	110.8°	110.5°
C1'	C2'	H2'	117.1°	110.5°
C2'	C1'	O4'	107.3°	104.8°
C2'	C1'	H1'	108.8°	110.4°
C4'	C5'	H5'	109.0°	109.4°
C4'	C5'	H5'A	108.7°	109.5°
C5'	C4'	C3'	116.7°	110.4°
C5'	C4'	O4'	109.9°	110.4°
C5'	C4'	H4'	102.7°	110.3°
H5'	C5'	H5'A	110.5°	109.5°
C3'	C4'	O4'	104.9°	104.8°
C3'	C4'	H4'	108.0°	110.4°
C4'	C3'	O3'	109.2°	110.5°
C4'	C3'	H3'	116.7°	110.5°
O4'	C4'	H4'	115.1°	110.4°
C4'	O4'	C1'	109.6°	105.3°
O4'	C1'	H1'	112.3°	110.5°
O3'	C3'	H3'	103.7°	110.5°
C3'	O3'	HO3'	109.5°	114.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
OP3	P	OP1	OP2	124.6°	120.0°
OP3	P	OP1	O5'	109.7°	120.0°
OP3	P	OP2	O5'	112.7°	120.0°
OP3	P	OP2	HOP2	124.5°	59.9°
OP3	P	O5'	C5'	96.4°	175.0°
OP1	P	OP2	O5'	126.2°	120.0°
OP1	P	OP3	HOP3	30.4°	60.0°
OP1	P	OP2	HOP2	114.3°	180.0°
OP1	P	O5'	C5'	153.2°	55.0°
OP2	P	OP3	HOP3	99.3°	60.1°
OP2	P	O5'	C5'	21.4°	65.0°
O5'	P	OP3	HOP3	144.6°	180.0°
O5'	P	OP2	HOP2	11.9°	60.1°
P	O5'	C5'	C4'	169.3°	180.0°
P	O5'	C5'	H5'	49.3°	60.0°
P	O5'	C5'	H5'A	71.2°	60.0°
O5'	C5'	C4'	H5'	120.0°	120.0°
O5'	C5'	C4'	H5'A	119.4°	120.1°
O5'	C5'	H5'	H5'A	119.4°	120.0°
O5'	C5'	C4'	C3'	58.1°	178.1°
O5'	C5'	C4'	O4'	61.1°	66.4°
O5'	C5'	C4'	H4'	176.0°	55.8°
C6	N1	C2	C1'	179.9°	179.7°
N1	C6	C5	H6	180.0°	180.0°
C6	N1	C2	N3	0.8°	0.3°
C6	N1	C2	O2	179.1°	179.7°
N1	C6	C5	C4	0.1°	0.5°
N1	C6	C5	H5	179.9°	180.0°
C6	N1	C1'	C2'	100.4°	64.7°
C6	N1	C1'	O4'	18.4°	50.7°
C6	N1	C1'	H1'	140.1°	173.1°
C2	N1	C6	C5	0.7°	0.0°
C2	N1	C6	H6	179.3°	180.0°
N1	C2	N3	O2	179.9°	180.0°
N1	C2	N3	C4	0.2°	0.1°
C2	N1	C1'	C2'	79.5°	115.0°
C2	N1	C1'	O4'	161.7°	129.6°
C2	N1	C1'	H1'	40.0°	7.3°
N1	C2	N3	HN3	179.8°	180.0°
C1'	N1	C6	C5	179.5°	179.7°
C1'	N1	C6	H6	0.5°	0.3°
C1'	N1	C2	N3	179.4°	180.0°
C1'	N1	C2	O2	0.8°	0.0°
N1	C1'	C2'	F2'	148.4°	98.5°
N1	C1'	C2'	C3'	92.9°	142.8°
N1	C1'	C2'	O4'	119.8°	118.8°
N1	C1'	C2'	H1'	118.5°	122.2°
N1	C1'	C2'	H2'	28.9°	24.0°
N1	C1'	O4'	C4'	116.9°	159.4°
N1	C1'	O4'	H1'	118.5°	122.3°
C6	C5	C4	N3	0.7°	0.7°
C6	C5	C4	O4	176.4°	179.8°
C6	C5	C4	H5	180.0°	179.5°
H6	C6	C5	C4	179.9°	179.5°
H6	C6	C5	H5	0.1°	0.0°
C2	N3	C4	HN3	180.0°	179.9°
C2	N3	C4	O4	176.7°	180.0°
C2	N3	C4	C5	0.5°	0.4°
O2	C2	N3	C4	179.7°	180.0°
O2	C2	N3	HN3	0.3°	0.0°
N3	C4	O4	C5	176.9°	179.5°
N3	C4	C5	H5	179.3°	179.8°
O4	C4	C5	H5	3.6°	0.3°
O4	C4	N3	HN3	3.3°	0.1°
C5	C4	N3	HN3	179.5°	179.5°
F2'	C2'	C3'	C1'	114.3°	118.6°
F2'	C2'	C3'	H2'	120.1°	122.6°
F2'	C2'	C1'	H2'	119.5°	122.5°
F2'	C2'	C3'	C4'	77.2°	118.7°
F2'	C2'	C1'	O4'	91.7°	142.6°
F2'	C2'	C1'	H1'	30.0°	23.7°
F2'	C2'	C3'	O3'	40.7°	0.0°
F2'	C2'	C3'	H3'	158.0°	122.7°
C3'	C2'	C1'	H2'	121.8°	118.8°
C2'	C3'	C4'	C5'	157.1°	142.8°
C2'	C3'	C4'	O3'	122.2°	118.7°
C2'	C3'	C4'	H3'	120.8°	118.6°
C2'	C3'	C4'	O4'	35.2°	23.9°
C2'	C3'	C4'	H4'	87.9°	95.0°
C3'	C2'	C1'	O4'	26.9°	24.0°
C3'	C2'	C1'	H1'	148.6°	94.9°
C2'	C3'	O3'	H3'	121.3°	122.7°
C2'	C3'	O3'	HO3'	134.8°	61.5°
C1'	C2'	C3'	C4'	37.1°	0.0°
C2'	C1'	O4'	C4'	5.1°	40.5°
C2'	C1'	O4'	H1'	119.5°	118.9°
C1'	C2'	C3'	O3'	155.1°	118.7°
C1'	C2'	C3'	H3'	87.6°	118.7°
H2'	C2'	C3'	C4'	162.7°	118.7°
H2'	C2'	C1'	O4'	148.7°	94.8°
H2'	C2'	C1'	H1'	89.6°	146.2°
H2'	C2'	C3'	O3'	79.3°	122.6°
H2'	C2'	C3'	H3'	38.0°	0.1°
C4'	C5'	H5'	H5'A	119.4°	120.0°
C5'	C4'	C3'	O4'	121.8°	118.9°
C5'	C4'	C3'	H4'	115.0°	122.2°
C5'	C4'	O4'	H4'	115.3°	122.2°
C5'	C4'	O4'	C1'	145.4°	159.4°
C5'	C4'	C3'	O3'	80.7°	98.5°
C5'	C4'	C3'	H3'	36.3°	24.2°
H5'	C5'	C4'	C3'	61.9°	61.9°
H5'	C5'	C4'	O4'	178.9°	53.5°
H5'	C5'	C4'	H4'	56.0°	175.8°
H5'A	C5'	C4'	C3'	177.5°	58.1°
H5'A	C5'	C4'	O4'	58.4°	173.5°
H5'A	C5'	C4'	H4'	64.6°	64.2°
C3'	C4'	O4'	H4'	118.5°	118.9°
C3'	C4'	O4'	C1'	19.2°	40.5°
C4'	C3'	O3'	H3'	125.0°	122.7°
C4'	C3'	O3'	HO3'	111.4°	176.1°
C4'	O4'	C1'	H1'	124.6°	78.4°
O4'	C4'	C3'	O3'	157.4°	142.6°
O4'	C4'	C3'	H3'	85.5°	94.7°
H4'	C4'	O4'	C1'	99.3°	78.4°
H4'	C4'	C3'	O3'	34.3°	23.7°
H4'	C4'	C3'	H3'	151.3°	146.4°
H3'	C3'	O3'	HO3'	13.6°	61.2°

Definition date:	2008-07-07
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB
Derived from:	3DD2