UFP

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N1	C2	sing	1.34Å	1.37Å
N1	C6	sing	1.37Å	1.54Å
N1	C1'	sing	1.47Å	1.45Å
C2	N3	sing	1.35Å	1.39Å
C2	O2	doub	1.22Å	1.22Å
N3	C4	sing	1.35Å	1.39Å
N3	HN3	sing	0.97Å	1.02Å
C4	C5	sing	1.42Å	1.64Å
C4	O4	doub	1.22Å	1.24Å
C5	C6	doub	1.35Å	1.61Å
C5	F5	sing	1.35Å	1.32Å
C6	H6	sing	1.08Å	1.10Å
C1'	C2'	sing	1.54Å	1.51Å
C1'	O4'	sing	1.44Å	1.48Å
C1'	H1'	sing	1.09Å	1.11Å
C2'	C3'	sing	1.55Å	1.53Å
C2'	H2'1	sing	1.09Å	1.12Å
C2'	H2'2	sing	1.09Å	1.12Å
C3'	C4'	sing	1.54Å	1.52Å
C3'	O3'	sing	1.43Å	1.42Å
C3'	H3'	sing	1.09Å	1.11Å
C4'	O4'	sing	1.45Å	1.47Å
C4'	C5'	sing	1.53Å	1.55Å
C4'	H4'	sing	1.09Å	1.11Å
O3'	HO3'	sing	0.97Å	0.95Å
C5'	O5'	sing	1.43Å	1.47Å
C5'	H5'1	sing	1.09Å	1.12Å
C5'	H5'2	sing	1.09Å	1.11Å
O5'	P	sing	1.61Å	1.59Å
P	O1P	doub	1.48Å	1.46Å
P	O2P	sing	1.61Å	1.46Å
P	O3P	sing	1.61Å	1.57Å
O2P	HOP2	sing	0.97Å	0.95Å
O3P	HOP3	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C2	N1	C6	121.0°	120.6°
C2	N1	C1'	124.3°	119.7°
N1	C2	N3	120.5°	121.0°
N1	C2	O2	124.1°	119.5°
C6	N1	C1'	114.7°	119.7°
N1	C6	C5	114.5°	119.7°
N1	C6	H6	120.7°	120.2°
N1	C1'	C2'	110.7°	110.4°
N1	C1'	O4'	107.1°	110.4°
N1	C1'	H1'	109.7°	110.3°
N3	C2	O2	115.4°	119.5°
C2	N3	C4	125.7°	120.3°
C2	N3	HN3	117.3°	119.9°
C4	N3	HN3	117.0°	119.8°
N3	C4	C5	117.8°	119.4°
N3	C4	O4	122.8°	120.3°
C5	C4	O4	118.7°	120.3°
C4	C5	C6	105.2°	119.1°
C4	C5	F5	115.8°	120.4°
C6	C5	F5	116.1°	120.5°
C5	C6	H6	124.8°	120.1°
C2'	C1'	O4'	108.0°	104.8°
C2'	C1'	H1'	108.9°	110.4°
C1'	C2'	C3'	98.1°	104.1°
C1'	C2'	H2'1	116.6°	110.5°
C1'	C2'	H2'2	116.6°	110.5°
O4'	C1'	H1'	112.4°	110.4°
C1'	O4'	C4'	106.4°	105.3°
C3'	C2'	H2'1	116.7°	110.5°
C3'	C2'	H2'2	116.6°	110.5°
C2'	C3'	C4'	105.1°	104.2°
C2'	C3'	O3'	109.2°	110.5°
C2'	C3'	H3'	113.6°	110.5°
H2'1	C2'	H2'2	93.8°	110.6°
C4'	C3'	O3'	112.6°	110.6°
C4'	C3'	H3'	110.3°	110.5°
C3'	C4'	O4'	105.6°	104.7°
C3'	C4'	C5'	115.7°	110.7°
C3'	C4'	H4'	107.3°	110.2°
O3'	C3'	H3'	106.3°	110.5°
C3'	O3'	HO3'	109.2°	106.8°
O4'	C4'	C5'	106.9°	110.3°
O4'	C4'	H4'	115.9°	110.3°
C5'	C4'	H4'	105.9°	110.3°
C4'	C5'	O5'	107.2°	109.6°
C4'	C5'	H5'1	113.1°	109.5°
C4'	C5'	H5'2	113.1°	109.5°
O5'	C5'	H5'1	113.1°	109.4°
O5'	C5'	H5'2	113.1°	109.5°
C5'	O5'	P	119.0°	106.8°
H5'1	C5'	H5'2	97.4°	109.4°
O5'	P	O1P	109.8°	109.5°
O5'	P	O2P	111.8°	109.5°
O5'	P	O3P	94.6°	109.4°
O1P	P	O2P	113.3°	109.5°
O1P	P	O3P	116.4°	109.5°
O2P	P	O3P	109.4°	109.5°
P	O2P	HOP2	111.8°	106.8°
P	O3P	HOP3	94.6°	106.9°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C2	N1	C6	C1'	178.9°	179.7°
N1	C2	N3	O2	180.0°	179.5°
N1	C2	N3	C4	2.5°	0.5°
N1	C2	N3	HN3	177.5°	179.7°
C2	N1	C6	C5	30.5°	0.3°
C2	N1	C6	H6	149.4°	179.8°
C2	N1	C1'	C2'	76.5°	60.3°
C2	N1	C1'	O4'	166.0°	55.2°
C2	N1	C1'	H1'	43.8°	177.5°
C6	N1	C2	N3	5.1°	0.5°
C6	N1	C2	O2	174.9°	180.0°
N1	C6	C5	C4	42.6°	0.0°
N1	C6	C5	H6	180.0°	179.9°
N1	C6	C5	F5	172.0°	180.0°
C6	N1	C1'	C2'	104.7°	120.0°
C6	N1	C1'	O4'	12.8°	124.5°
C6	N1	C1'	H1'	135.1°	2.2°
C1'	N1	C2	N3	173.7°	179.8°
C1'	N1	C2	O2	6.3°	0.2°
C1'	N1	C6	C5	148.3°	180.0°
C1'	N1	C6	H6	31.7°	0.1°
N1	C1'	C2'	O4'	116.9°	118.9°
N1	C1'	C2'	H1'	120.7°	122.2°
N1	C1'	O4'	H1'	120.6°	122.3°
N1	C1'	C2'	C3'	155.0°	142.9°
N1	C1'	C2'	H2'1	79.7°	24.3°
N1	C1'	C2'	H2'2	29.7°	98.4°
N1	C1'	O4'	C4'	142.2°	159.3°
C2	N3	C4	HN3	180.0°	179.8°
C2	N3	C4	C5	16.2°	0.2°
C2	N3	C4	O4	174.1°	179.7°
O2	C2	N3	C4	177.6°	180.0°
O2	C2	N3	HN3	2.4°	0.2°
N3	C4	C5	O4	170.1°	180.0°
N3	C4	C5	C6	37.0°	0.0°
N3	C4	C5	F5	166.7°	180.0°
HN3	N3	C4	C5	163.8°	179.9°
HN3	N3	C4	O4	5.9°	0.1°
C4	C5	C6	F5	129.5°	180.0°
C4	C5	C6	H6	137.4°	180.0°
O4	C4	C5	C6	152.8°	179.9°
O4	C4	C5	F5	23.2°	0.1°
F5	C5	C6	H6	8.0°	0.0°
C2'	C1'	O4'	H1'	120.2°	118.9°
C1'	C2'	C3'	H2'1	125.3°	118.6°
C1'	C2'	C3'	H2'2	125.2°	118.7°
C1'	C2'	H2'1	H2'2	122.3°	122.7°
C1'	C2'	C3'	C4'	39.0°	0.1°
C1'	C2'	C3'	O3'	82.0°	118.6°
C1'	C2'	C3'	H3'	159.6°	118.7°
C2'	C1'	O4'	C4'	23.0°	40.4°
O4'	C1'	C2'	C3'	38.1°	24.0°
O4'	C1'	C2'	H2'1	163.4°	94.6°
O4'	C1'	C2'	H2'2	87.2°	142.6°
C1'	O4'	C4'	C3'	3.0°	40.3°
C1'	O4'	C4'	C5'	120.7°	159.5°
C1'	O4'	C4'	H4'	121.5°	78.3°
H1'	C1'	C2'	C3'	84.3°	94.9°
H1'	C1'	C2'	H2'1	41.1°	146.5°
H1'	C1'	C2'	H2'2	150.5°	23.8°
H1'	C1'	O4'	C4'	97.2°	78.4°
C3'	C2'	H2'1	H2'2	122.3°	122.6°
C2'	C3'	C4'	O3'	118.7°	118.7°
C2'	C3'	C4'	H3'	122.8°	118.7°
C2'	C3'	O3'	H3'	122.9°	122.6°
C2'	C3'	C4'	O4'	27.2°	23.8°
C2'	C3'	C4'	C5'	90.8°	142.7°
C2'	C3'	C4'	H4'	151.4°	94.9°
C2'	C3'	O3'	HO3'	180.0°	63.3°
H2'1	C2'	C3'	C4'	164.3°	118.5°
H2'1	C2'	C3'	O3'	43.3°	122.7°
H2'1	C2'	C3'	H3'	75.1°	0.1°
H2'2	C2'	C3'	C4'	86.3°	118.8°
H2'2	C2'	C3'	O3'	152.7°	0.0°
H2'2	C2'	C3'	H3'	34.3°	122.6°
C4'	C3'	O3'	H3'	120.8°	122.6°
C3'	C4'	O4'	C5'	123.7°	119.2°
C3'	C4'	O4'	H4'	118.5°	118.6°
C3'	C4'	C5'	H4'	118.6°	122.3°
C4'	C3'	O3'	HO3'	63.7°	178.1°
C3'	C4'	C5'	O5'	69.8°	176.9°
C3'	C4'	C5'	H5'1	55.5°	63.1°
C3'	C4'	C5'	H5'2	164.9°	56.9°
O3'	C3'	C4'	O4'	91.6°	142.5°
O3'	C3'	C4'	C5'	150.5°	98.6°
O3'	C3'	C4'	H4'	32.6°	23.8°
H3'	C3'	C4'	O4'	149.9°	94.9°
H3'	C3'	C4'	C5'	31.9°	24.1°
H3'	C3'	C4'	H4'	85.9°	146.5°
H3'	C3'	O3'	HO3'	57.1°	59.3°
O4'	C4'	C5'	H4'	124.2°	122.2°
O4'	C4'	C5'	O5'	173.0°	61.5°
O4'	C4'	C5'	H5'1	61.7°	178.5°
O4'	C4'	C5'	H5'2	47.7°	58.6°
C4'	C5'	O5'	H5'1	125.3°	120.0°
C4'	C5'	O5'	H5'2	125.3°	120.1°
C4'	C5'	H5'1	H5'2	119.0°	119.9°
C4'	C5'	O5'	P	134.0°	180.0°
H4'	C4'	C5'	O5'	48.8°	60.7°
H4'	C4'	C5'	H5'1	174.1°	59.3°
H4'	C4'	C5'	H5'2	76.5°	179.2°
O5'	C5'	H5'1	H5'2	119.0°	120.0°
C5'	O5'	P	O1P	56.7°	60.0°
C5'	O5'	P	O2P	70.0°	180.0°
C5'	O5'	P	O3P	177.0°	60.1°
H5'1	C5'	O5'	P	8.7°	60.0°
H5'2	C5'	O5'	P	100.7°	59.9°
O5'	P	O1P	O2P	125.8°	120.0°
O5'	P	O1P	O3P	106.0°	120.0°
O5'	P	O2P	O3P	103.5°	120.0°
O5'	P	O2P	HOP2	179.9°	180.0°
O5'	P	O3P	HOP3	180.0°	60.0°
O1P	P	O2P	O3P	131.8°	120.0°
O1P	P	O2P	HOP2	55.2°	60.0°
O1P	P	O3P	HOP3	65.1°	179.9°
O2P	P	O3P	HOP3	65.0°	59.9°
O3P	P	O2P	HOP2	76.6°	60.0°

Definition date:	1999-07-08
Last modified:	2024-09-27
Release status:	REL
Processing site:	RCSB
Derived from:	1TSN