UF2

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O3'	C3'	sing	1.43Å	1.44Å
C4'	C3'	sing	1.55Å	1.53Å
C4'	C5'	sing	1.53Å	1.51Å
C4'	O4'	sing	1.44Å	1.44Å
C3'	C2'	sing	1.54Å	1.52Å
C5'	O5'	sing	1.43Å	1.44Å
O4'	C1'	sing	1.44Å	1.42Å
C2'	C1'	sing	1.54Å	1.52Å
C2'	F2'	sing	1.40Å	1.36Å
C1'	N1	sing	1.47Å	1.47Å
O5'	P	sing	1.61Å	1.60Å
O1P	P	doub	1.48Å	1.49Å
O2	C2	doub	1.22Å	1.22Å
N1	C2	sing	1.35Å	1.38Å
N1	C6	sing	1.37Å	1.38Å
P	O2P	sing	1.61Å	1.48Å
C2	N3	sing	1.35Å	1.37Å
C6	C5	doub	1.35Å	1.34Å
N3	C4	sing	1.35Å	1.38Å
C5	C4	sing	1.42Å	1.43Å
C4	O4	doub	1.22Å	1.23Å
P	O1	sing	1.61Å	1.60Å
C5'	H1	sing	1.09Å	1.10Å
C5'	H2	sing	1.09Å	1.10Å
C4'	H3	sing	1.09Å	1.10Å
C3'	H4	sing	1.09Å	1.10Å
O3'	H5	sing	0.97Å	0.95Å
C2'	H6	sing	1.09Å	1.10Å
C1'	H7	sing	1.09Å	1.10Å
C6	H8	sing	1.08Å	1.08Å
C5	H9	sing	1.08Å	1.08Å
N3	H10	sing	0.97Å	1.00Å
O2P	H11	sing	0.97Å	0.95Å
O1	H12	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O3'	C3'	C4'	109.5°	110.5°
O3'	C3'	C2'	112.4°	110.5°
O3'	C3'	H4	106.2°	110.6°
C3'	O3'	H5	109.5°	114.0°
C3'	C4'	C5'	114.0°	110.4°
C3'	C4'	O4'	106.4°	104.8°
C4'	C3'	C2'	105.4°	104.1°
C3'	C4'	H3	108.1°	110.3°
C4'	C3'	H4	113.1°	110.5°
C5'	C4'	O4'	108.1°	110.4°
C4'	C5'	O5'	109.4°	109.5°
C4'	C5'	H1	109.5°	109.5°
C4'	C5'	H2	109.5°	109.4°
C5'	C4'	H3	106.4°	110.4°
C4'	O4'	C1'	111.4°	105.3°
O4'	C4'	H3	114.1°	110.5°
C3'	C2'	C1'	106.4°	104.1°
C3'	C2'	F2'	110.4°	110.6°
C2'	C3'	H4	110.3°	110.5°
C3'	C2'	H6	110.5°	110.5°
C5'	O5'	P	122.7°	123.0°
O5'	C5'	H1	109.5°	109.5°
O5'	C5'	H2	109.5°	109.4°
O4'	C1'	C2'	107.1°	104.8°
O4'	C1'	N1	107.6°	110.4°
O4'	C1'	H7	114.8°	110.4°
C1'	C2'	F2'	108.1°	110.5°
C2'	C1'	N1	116.2°	110.3°
C1'	C2'	H6	112.7°	110.5°
C2'	C1'	H7	105.9°	110.4°
F2'	C2'	H6	108.8°	110.6°
C1'	N1	C2	118.5°	119.7°
C1'	N1	C6	120.5°	119.7°
N1	C1'	H7	105.5°	110.3°
O5'	P	O1P	108.2°	109.5°
O5'	P	O2P	110.8°	109.5°
O5'	P	O1	101.6°	109.5°
O1P	P	O2P	119.3°	109.4°
O1P	P	O1	111.8°	109.5°
O2	C2	N1	122.9°	119.5°
O2	C2	N3	122.1°	119.5°
C2	N1	C6	120.9°	120.6°
N1	C2	N3	115.0°	120.9°
N1	C6	C5	122.8°	119.7°
N1	C6	H8	118.6°	120.2°
O2P	P	O1	103.8°	109.5°
P	O2P	H11	109.5°	114.0°
C2	N3	C4	127.0°	120.3°
C2	N3	H10	116.5°	119.8°
C6	C5	C4	119.7°	119.1°
C5	C6	H8	118.6°	120.1°
C6	C5	H9	120.2°	120.4°
N3	C4	C5	114.7°	119.4°
N3	C4	O4	119.4°	120.3°
C4	N3	H10	116.5°	119.9°
C5	C4	O4	125.9°	120.3°
C4	C5	H9	120.2°	120.5°
P	O1	H12	109.5°	114.0°
H1	C5'	H2	109.5°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O3'	C3'	C4'	C2'	121.1°	118.7°
O3'	C3'	C4'	H4	118.3°	122.7°
O3'	C3'	C4'	C5'	107.1°	98.5°
O3'	C3'	C4'	O4'	133.9°	142.6°
O3'	C3'	C2'	H4	118.3°	122.7°
O3'	C3'	C2'	C1'	122.0°	118.6°
O3'	C3'	C2'	F2'	120.9°	122.7°
O3'	C3'	C4'	H3	11.0°	23.7°
O3'	C3'	C2'	H6	0.5°	0.0°
C3'	C4'	C5'	O4'	118.1°	115.4°
C3'	C4'	C5'	H3	119.0°	122.2°
C3'	C4'	O4'	H3	119.0°	118.8°
C4'	C3'	C2'	H4	122.4°	118.6°
C3'	C4'	C5'	O5'	57.8°	175.0°
C3'	C4'	O4'	C1'	19.1°	40.5°
C4'	C3'	C2'	C1'	2.8°	0.0°
C4'	C3'	C2'	F2'	119.9°	118.7°
C3'	C4'	C5'	H1	177.8°	64.9°
C3'	C4'	C5'	H2	62.2°	55.0°
C4'	C3'	O3'	H5	180.0°	179.9°
C4'	C3'	C2'	H6	119.8°	118.6°
C5'	C4'	O4'	H3	118.1°	122.3°
C5'	C4'	C3'	C2'	131.8°	142.8°
C4'	C5'	O5'	H1	120.0°	120.1°
C4'	C5'	O5'	H2	120.0°	120.0°
C5'	C4'	O4'	C1'	141.9°	159.3°
C4'	C5'	O5'	P	152.8°	180.0°
C4'	C5'	H1	H2	120.1°	119.9°
C5'	C4'	C3'	H4	11.2°	24.2°
O4'	C4'	C3'	C2'	12.8°	23.9°
O4'	C4'	C5'	O5'	60.3°	69.7°
C4'	O4'	C1'	C2'	17.3°	40.5°
C4'	O4'	C1'	N1	142.9°	159.3°
O4'	C4'	C5'	H1	59.7°	50.4°
O4'	C4'	C5'	H2	179.7°	170.4°
O4'	C4'	C3'	H4	107.8°	94.7°
C4'	O4'	C1'	H7	100.0°	78.4°
C3'	C2'	C1'	O4'	8.3°	24.0°
C3'	C2'	C1'	F2'	118.6°	118.7°
C3'	C2'	C1'	H6	121.2°	118.6°
C3'	C2'	F2'	H6	121.4°	122.7°
C3'	C2'	C1'	N1	128.5°	142.9°
C2'	C3'	C4'	H3	110.1°	95.0°
C2'	C3'	O3'	H5	63.2°	65.4°
C3'	C2'	C1'	H7	114.7°	94.9°
C5'	O5'	P	O1P	36.3°	54.9°
C5'	O5'	P	O2P	168.7°	65.0°
C5'	O5'	P	O1	81.5°	175.0°
O5'	C5'	H1	H2	120.0°	120.0°
O5'	C5'	C4'	H3	176.8°	52.7°
O4'	C1'	C2'	N1	120.2°	118.9°
O4'	C1'	C2'	H7	123.0°	118.9°
O4'	C1'	C2'	F2'	110.3°	94.7°
O4'	C1'	N1	H7	123.0°	122.3°
O4'	C1'	N1	C2	155.3°	129.6°
O4'	C1'	N1	C6	21.8°	50.6°
C1'	O4'	C4'	H3	100.0°	78.3°
O4'	C1'	C2'	H6	129.4°	142.6°
C1'	C2'	F2'	H6	122.7°	122.7°
C2'	C1'	N1	H7	117.0°	122.3°
C2'	C1'	N1	C2	84.8°	115.0°
C2'	C1'	N1	C6	98.2°	64.8°
C1'	C2'	C3'	H4	119.6°	118.6°
F2'	C2'	C1'	N1	9.9°	24.2°
F2'	C2'	C3'	H4	2.6°	0.1°
F2'	C2'	C1'	H7	126.7°	146.4°
C1'	N1	C2	O2	2.0°	0.1°
C1'	N1	C2	C6	177.1°	179.8°
C1'	N1	C2	N3	177.9°	179.7°
C1'	N1	C6	C5	177.5°	179.9°
N1	C1'	C2'	H6	110.3°	98.6°
C1'	N1	C6	H8	2.5°	0.0°
O5'	P	O1P	O2P	127.8°	120.0°
O5'	P	O1P	O1	111.1°	120.0°
O5'	P	O2P	O1	108.3°	120.0°
P	O5'	C5'	H1	32.8°	59.9°
P	O5'	C5'	H2	87.2°	60.0°
O5'	P	O2P	H11	126.5°	60.0°
O5'	P	O1	H12	115.2°	180.0°
O1P	P	O2P	O1	125.1°	119.9°
O1P	P	O2P	H11	0.0°	180.0°
O1P	P	O1	H12	0.0°	60.0°
O2	C2	N1	N3	179.9°	179.8°
O2	C2	N1	C6	179.0°	179.7°
O2	C2	N3	C4	178.7°	179.6°
O2	C2	N3	H10	1.3°	0.0°
C2	N1	C6	C5	0.5°	0.3°
N1	C2	N3	C4	1.2°	0.6°
C2	N1	C1'	H7	32.3°	7.2°
C2	N1	C6	H8	179.5°	179.8°
N1	C2	N3	H10	178.8°	179.8°
C6	N1	C2	N3	0.9°	0.5°
N1	C6	C5	H8	180.0°	180.0°
N1	C6	C5	C4	0.4°	0.0°
C6	N1	C1'	H7	144.8°	173.0°
N1	C6	C5	H9	179.6°	180.0°
O2P	P	O1	H12	129.8°	60.0°
C2	N3	C4	H10	180.0°	179.6°
C2	N3	C4	C5	1.1°	0.3°
C2	N3	C4	O4	179.3°	179.7°
C6	C5	C4	N3	0.7°	0.1°
C6	C5	C4	H9	180.0°	179.9°
C6	C5	C4	O4	179.9°	180.0°
N3	C4	C5	O4	179.5°	179.9°
N3	C4	C5	H9	179.4°	180.0°
C4	C5	C6	H8	179.6°	180.0°
C5	C4	N3	H10	178.9°	180.0°
O4	C4	C5	H9	0.1°	0.1°
O4	C4	N3	H10	0.7°	0.1°
O1	P	O2P	H11	125.2°	60.1°
H1	C5'	C4'	H3	63.2°	172.8°
H2	C5'	C4'	H3	56.9°	67.2°
H3	C4'	C3'	H4	129.3°	146.4°
H4	C3'	O3'	H5	57.5°	57.3°
H4	C3'	C2'	H6	117.8°	122.8°
H6	C2'	C1'	H7	6.4°	23.7°
H8	C6	C5	H9	0.4°	0.1°

Definition date:	2011-11-04
Last modified:	2020-06-17
Release status:	REL
Processing site:	RCSB
Derived from:	3UFJ