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UDZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C6'N6'sing1.47Å1.46Å
C6'C5'sing1.53Å1.55Å
N6'N40doub1.12Å1.31Å
N40N41doub1.12Å1.18Å
C5'O5'sing1.43Å1.44Å
C5'C4'sing1.53Å1.55Å
O4'C4'sing1.43Å1.45Å
O5'C1'sing1.43Å1.43Å
O1APAdoub1.48Å1.50Å
C4'C3'sing1.53Å1.56Å
C5BC4Bsing1.53Å1.52Å
C5BO5Bsing1.43Å1.43Å
O3APAsing1.61Å1.61Å
O3APBsing1.61Å1.62Å
O1BPBdoub1.48Å1.51Å
O1'C1'sing1.43Å1.44Å
O1'PBsing1.61Å1.61Å
PAO5Bsing1.61Å1.66Å
PAO2Asing1.61Å1.50Å
C4BC3Bsing1.54Å1.57Å
C4BO4Bsing1.44Å1.45Å
C1'C2'sing1.53Å1.52Å
PBO2Bsing1.61Å1.53Å
C3'C2'sing1.53Å1.58Å
C3'O3'sing1.43Å1.44Å
C3BO3Bsing1.43Å1.46Å
C3BC2Bsing1.55Å1.55Å
O4BC1Bsing1.44Å1.45Å
C2'N2'sing1.46Å1.47Å
C1BC2Bsing1.55Å1.55Å
C1BN1sing1.46Å1.46Å
C2BO2'sing1.43Å1.42Å
N2'C7'sing1.35Å1.35Å
N1C6sing1.37Å1.36Å
N1C2sing1.35Å1.43Å
C6C5doub1.35Å1.40Å
C7'C8'sing1.51Å1.49Å
C7'O7'doub1.21Å1.23Å
O2C2doub1.22Å1.25Å
C2N3sing1.35Å1.34Å
C5C4sing1.42Å1.43Å
N3C4sing1.35Å1.37Å
C4O4doub1.22Å1.28Å
N3H1sing0.97Å1.00Å
C5H2sing1.08Å1.08Å
C6H3sing1.08Å1.08Å
C1'H4sing1.09Å1.10Å
C1BH5sing1.09Å1.10Å
C2'H6sing1.09Å1.10Å
O2'H7sing0.97Å0.95Å
O2AH8sing0.97Å0.95Å
C2BH9sing1.09Å1.10Å
O2BH10sing0.97Å0.95Å
C3'H11sing1.09Å1.10Å
O3'H12sing0.97Å0.95Å
C3BH13sing1.09Å1.10Å
O3BH14sing0.97Å0.95Å
C4'H15sing1.09Å1.10Å
O4'H16sing0.97Å0.95Å
C4BH17sing1.09Å1.10Å
C5'H18sing1.09Å1.10Å
C5BH19sing1.09Å1.10Å
C5BH20sing1.09Å1.10Å
C6'H21sing1.09Å1.10Å
C6'H22sing1.09Å1.10Å
C8'H23sing1.09Å1.10Å
C8'H24sing1.09Å1.10Å
C8'H25sing1.09Å1.10Å
N2'H26sing0.97Å1.00Å
N41H27sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N6'C6'C5'110.0°109.5°
C6'N6'N40122.3°120.0°
N6'C6'H21109.3°109.5°
N6'C6'H22109.3°109.5°
C6'C5'O5'112.8°109.5°
C6'C5'C4'115.1°109.5°
C6'C5'H18104.1°109.5°
C5'C6'H21109.3°109.5°
C5'C6'H22109.3°109.4°
N6'N40N41173.1°179.9°
N40N41H27112.0°120.1°
O5'C5'C4'114.0°109.4°
C5'O5'C1'117.1°114.1°
O5'C5'H18105.2°109.5°
C5'C4'O4'102.7°109.6°
C5'C4'C3'111.2°109.2°
C5'C4'H15110.1°109.5°
C4'C5'H18104.1°109.4°
O4'C4'C3'111.1°109.5°
O4'C4'H15111.6°109.5°
C4'O4'H16109.5°114.0°
O5'C1'O1'109.5°109.5°
O5'C1'C2'110.3°109.4°
O5'C1'H4109.9°109.5°
O1APAO3A104.1°109.5°
O1APAO5B112.7°109.4°
O1APAO2A123.5°109.5°
C4'C3'C2'115.6°109.0°
C4'C3'O3'115.3°109.5°
C4'C3'H11105.1°109.6°
C3'C4'H15110.0°109.5°
C4BC5BO5B106.6°109.4°
C5BC4BC3B114.7°109.8°
C5BC4BO4B106.4°109.9°
C5BC4BH17109.4°110.0°
C4BC5BH19110.2°109.5°
C4BC5BH20110.2°109.5°
C5BO5BPA124.1°123.0°
O5BC5BH19110.1°109.5°
O5BC5BH20110.1°109.4°
PAO3APB121.8°134.0°
O3APAO5B100.2°109.4°
O3APAO2A110.0°109.5°
O3APBO1B109.0°109.5°
O3APBO1'99.7°109.5°
O3APBO2B108.2°109.5°
O1BPBO1'109.5°109.5°
O1BPBO2B121.3°109.5°
C1'O1'PB118.4°123.0°
O1'C1'C2'108.5°109.5°
O1'C1'H4109.9°109.5°
O1'PBO2B106.9°109.4°
O5BPAO2A104.0°109.5°
PAO2AH8109.5°114.0°
C3BC4BO4B107.2°107.3°
C4BC3BO3B118.0°110.5°
C4BC3BC2B104.3°104.2°
C4BC3BH13108.7°110.6°
C3BC4BH17108.7°109.9°
C4BO4BC1B108.1°107.0°
O4BC4BH17110.3°109.9°
C1'C2'C3'108.3°109.1°
C1'C2'N2'108.0°109.5°
C2'C1'H4108.8°109.5°
C1'C2'H6109.0°109.5°
PBO2BH10109.5°114.0°
C2'C3'O3'108.5°109.5°
C3'C2'N2'113.5°109.5°
C3'C2'H6108.3°109.6°
C2'C3'H11105.0°109.6°
O3'C3'H11106.5°109.5°
C3'O3'H12109.5°114.0°
O3BC3BC2B106.4°110.5°
O3BC3BH13110.1°110.4°
C3BO3BH14109.5°114.0°
C3BC2BC1B100.0°102.1°
C3BC2BO2'113.9°110.9°
C3BC2BH9107.5°110.9°
C2BC3BH13108.9°110.5°
O4BC1BC2B107.7°103.5°
O4BC1BN1110.4°110.6°
O4BC1BH5109.0°110.7°
C2'N2'C7'127.0°120.0°
N2'C2'H6109.7°109.5°
C2'N2'H26116.5°120.0°
C2BC1BN1112.9°110.6°
C1BC2BO2'118.1°110.9°
C2BC1BH5107.8°110.6°
C1BC2BH9107.5°110.9°
C1BN1C6120.0°119.6°
C1BN1C2120.7°119.7°
N1C1BH5108.9°110.6°
C2BO2'H7109.5°114.0°
O2'C2BH9109.1°110.8°
N2'C7'C8'117.2°120.0°
N2'C7'O7'123.0°120.0°
C7'N2'H26116.5°120.0°
C6N1C2119.2°120.6°
N1C6C5121.7°119.7°
N1C6H3119.2°120.2°
N1C2O2120.6°119.5°
N1C2N3119.2°120.9°
C6C5C4118.1°119.1°
C6C5H2120.9°120.5°
C5C6H3119.2°120.1°
C8'C7'O7'119.8°120.0°
C7'C8'H23109.5°109.5°
C7'C8'H24109.5°109.5°
C7'C8'H25109.5°109.5°
O2C2N3120.2°119.6°
C2N3C4123.2°120.3°
C2N3H1118.4°119.9°
C5C4N3118.5°119.4°
C5C4O4119.6°120.3°
C4C5H2120.9°120.4°
N3C4O4121.9°120.3°
C4N3H1118.4°119.9°
H19C5BH20109.5°109.5°
H21C6'H22109.5°109.4°
H23C8'H24109.4°109.5°
H23C8'H25109.5°109.5°
H24C8'H25109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N6'C6'C5'H21120.1°120.0°
N6'C6'C5'H22120.1°120.0°
C6'N6'N40N4125.8°110.6°
N6'C6'C5'O5'56.1°65.0°
N6'C6'C5'C4'77.1°175.0°
N6'C6'C5'H18169.6°55.0°
N6'C6'H21H22119.7°120.0°
C5'C6'N6'N4061.9°120.0°
C6'C5'O5'C4'133.8°120.0°
C6'C5'O5'H18112.9°120.0°
C6'C5'C4'H18113.3°120.0°
C6'C5'C4'O4'69.8°62.4°
C6'C5'O5'C1'174.1°178.8°
C6'C5'C4'C3'171.4°177.6°
C6'C5'C4'H1549.1°57.7°
C5'C6'H21H22119.8°119.9°
N40N6'C6'H21178.0°0.0°
N40N6'C6'H2258.2°120.0°
N6'N40N41H270.0°20.6°
O5'C5'C4'H18114.0°120.0°
O5'C5'C4'O4'157.5°177.5°
O5'C5'C4'C3'38.7°57.6°
C5'O5'C1'O1'57.0°58.8°
C5'O5'C1'C2'62.2°61.2°
C5'O5'C1'H4177.8°178.9°
O5'C5'C4'H1583.6°62.3°
O5'C5'C6'H21176.2°175.0°
O5'C5'C6'H2264.0°55.1°
C5'C4'O4'C3'118.9°119.8°
C5'C4'O4'H15117.9°120.1°
C4'C5'O5'C1'52.1°61.1°
C5'C4'C3'H15122.3°119.9°
C5'C4'C3'C2'39.9°57.0°
C5'C4'C3'O3'167.8°176.8°
C5'C4'C3'H1175.3°63.0°
C5'C4'O4'H16180.0°60.2°
C4'C5'C6'H2143.0°55.0°
C4'C5'C6'H22162.8°64.9°
O4'C4'C3'H15124.0°120.1°
O4'C4'C3'C2'153.6°177.0°
O4'C4'C3'O3'78.5°63.2°
O4'C4'C3'H1138.4°57.0°
O4'C4'C5'H1843.5°57.6°
O5'C1'O1'C2'120.4°120.0°
O5'C1'O1'H4120.8°120.0°
O5'C1'O1'PB118.9°90.1°
O5'C1'C2'H4120.7°120.0°
O5'C1'C2'C3'57.3°57.6°
O5'C1'C2'N2'179.3°177.5°
O5'C1'C2'H660.3°62.4°
C1'O5'C5'H1861.3°58.8°
O1APAO5BC5B23.3°55.1°
O1APAO3AO5B116.7°120.0°
O1APAO3AO2A134.2°120.1°
O1APAO3APB173.3°40.0°
O1APAO5BO2A136.2°120.0°
O1APAO2AH80.0°180.0°
C4'C3'C2'C1'49.3°57.0°
C4'C3'C2'O3'131.2°119.8°
C4'C3'C2'H11115.3°120.0°
C4'C3'O3'H11116.1°120.3°
C4'C3'C2'N2'169.3°176.9°
C4'C3'C2'H668.7°62.9°
C4'C3'O3'H12180.0°60.4°
C3'C4'O4'H1661.1°180.0°
C3'C4'C5'H1875.3°62.4°
C4BC5BO5BH19119.6°120.0°
C4BC5BO5BH20119.6°120.0°
C4BC5BO5BPA162.6°180.0°
C5BC4BC3BO4B118.0°119.5°
C5BC4BC3BH17122.8°121.1°
C5BC4BO4BH17118.5°121.2°
C5BC4BC3BO3B141.9°119.9°
C5BC4BC3BC2B100.3°121.5°
C5BC4BO4BC1B128.0°145.9°
C5BC4BC3BH1315.7°2.7°
C4BC5BH19H20121.4°120.1°
C5BO5BPAO3A86.8°175.0°
C5BO5BPAO2A159.4°64.9°
O5BC5BC4BC3B57.0°175.0°
O5BC5BC4BO4B61.4°67.1°
O5BC5BC4BH17179.5°54.0°
O5BC5BH19H20121.3°120.0°
PAO3APBO1B118.8°40.0°
PAO3APBO1'126.5°160.0°
O3APAO5BO2A113.8°120.0°
PAO3APBO2B15.0°80.0°
O3APAO2AH8123.5°60.0°
O3APBO1BO1'108.2°120.0°
O3APBO1BO2B126.6°120.0°
O3APBO1'C1'53.3°175.0°
O3APBO1'O2B112.5°120.0°
PBO3APAO5B70.0°160.0°
PBO3APAO2A39.1°80.0°
O3APBO2BH10126.9°60.0°
O1BPBO1'C1'167.6°55.0°
O1BPBO1'O2B133.1°120.0°
O1BPBO2BH100.0°180.0°
O1'C1'C2'H4119.5°120.0°
C1'O1'PBO2B59.3°65.0°
O1'C1'C2'C3'62.5°62.4°
O1'C1'C2'N2'60.8°57.5°
O1'C1'C2'H6179.9°177.6°
PBO1'C1'C2'120.7°150.0°
PBO1'C1'H41.9°30.0°
O1'PBO2BH10126.4°60.0°
O5BPAO2AH8130.0°60.0°
PAO5BC5BH1943.0°59.9°
PAO5BC5BH2077.9°60.1°
C3BC4BO4BH17118.2°119.4°
C4BC3BO3BC2B116.7°114.8°
C4BC3BO3BH13125.5°122.7°
C4BC3BC2BH13115.9°118.8°
C3BC4BO4BC1B4.7°26.5°
C4BC3BC2BC1B31.0°20.9°
C4BC3BC2BO2'157.9°139.1°
C4BC3BC2BH981.1°97.3°
C4BC3BO3BH14180.0°176.2°
C3BC4BC5BH19176.5°55.0°
C3BC4BC5BH2062.5°65.1°
O4BC4BC3BO3B100.1°120.7°
O4BC4BC3BC2B17.7°2.0°
C4BO4BC1BC2B25.8°40.0°
C4BO4BC1BN1149.5°158.5°
C4BO4BC1BH590.9°78.5°
O4BC4BC3BH13133.7°116.7°
O4BC4BC5BH1958.1°172.8°
O4BC4BC5BH20179.0°52.8°
C1'C2'C3'N2'119.9°119.9°
C1'C2'C3'H6118.0°119.9°
C1'C2'C3'O3'179.4°176.8°
C1'C2'N2'H6118.6°120.1°
C1'C2'N2'C7'161.0°85.0°
C1'C2'C3'H1165.9°63.0°
C1'C2'N2'H2619.0°94.9°
C2'C3'O3'H11112.5°120.2°
C3'C2'N2'H6121.3°120.2°
C3'C2'N2'C7'78.8°155.4°
C3'C2'C1'H4178.0°177.6°
C2'C3'O3'H1248.6°180.0°
C2'C3'C4'H1582.4°62.9°
C3'C2'N2'H26101.1°24.7°
O3'C3'C2'N2'59.5°63.3°
O3'C3'C2'H662.6°56.9°
O3'C3'C4'H1545.5°56.9°
O3BC3BC2BH13118.6°122.5°
O3BC3BC2BC1B94.5°97.8°
O3BC3BC2BO2'32.5°20.4°
O3BC3BC2BH9153.5°144.0°
O3BC3BC4BH1719.1°1.2°
C3BC2BC1BO4B35.5°37.0°
C3BC2BC1BO2'124.1°118.2°
C3BC2BC1BH9112.1°118.2°
C3BC2BC1BN1157.6°155.5°
C3BC2BO2'H9120.1°123.7°
C3BC2BC1BH582.1°81.6°
C3BC2BO2'H7180.0°67.2°
C2BC3BO3BH1463.4°61.5°
C2BC3BC4BH17136.9°117.4°
O4BC1BC2BN1122.1°118.5°
O4BC1BC2BH5117.5°118.6°
O4BC1BN1H5119.7°123.0°
O4BC1BC2BO2'159.6°155.2°
O4BC1BN1C666.2°130.9°
O4BC1BN1C2110.2°49.4°
O4BC1BC2BH976.6°81.2°
C1BO4BC4BH17113.5°92.9°
C2'N2'C7'H26180.0°179.9°
C2'N2'C7'C8'24.5°180.0°
C2'N2'C7'O7'156.0°0.1°
N2'C2'C1'H458.6°62.5°
N2'C2'C3'H1154.0°56.9°
C2BC1BN1H5119.7°122.9°
C1BC2BO2'H9123.0°123.6°
C2BC1BN1C654.4°115.0°
C2BC1BN1C2129.2°64.7°
C1BC2BO2'H763.1°180.0°
C1BC2BC3BH13146.9°139.7°
N1C1BC2BO2'78.3°86.3°
C1BN1C6C2176.4°179.7°
C1BN1C6C5179.0°179.7°
C1BN1C2O22.6°0.3°
C1BN1C2N3178.9°179.7°
C1BN1C6H31.0°0.2°
N1C1BC2BH945.5°37.2°
O2'C2BC1BH542.0°36.6°
O2'C2BC3BH1386.1°102.1°
N2'C7'C8'O7'179.5°180.0°
C7'N2'C2'H642.5°35.2°
N2'C7'C8'H23179.5°90.0°
N2'C7'C8'H2459.5°30.1°
N2'C7'C8'H2560.5°150.0°
N1C6C5H3180.0°179.9°
C6N1C2O2179.0°180.0°
C6N1C2N32.5°0.0°
N1C6C5C40.8°0.0°
N1C6C5H2179.3°180.0°
C6N1C1BH5174.1°7.9°
C2N1C6C52.5°0.0°
N1C2O2N3178.4°180.0°
N1C2N3C40.7°0.0°
N1C2N3H1179.2°180.0°
C2N1C6H3177.4°179.9°
C2N1C1BH59.5°172.4°
C6C5C4H2180.0°179.9°
C6C5C4N31.0°0.0°
C6C5C4O4177.6°180.0°
C7'C8'H23H24120.0°120.0°
C7'C8'H23H25120.0°120.0°
C7'C8'H24H25120.0°120.0°
C8'C7'N2'H26155.5°0.1°
O7'C7'C8'H230.0°90.0°
O7'C7'C8'H24120.0°150.0°
O7'C7'C8'H25120.0°30.0°
O7'C7'N2'H2624.0°180.0°
O2C2N3C4179.2°180.0°
O2C2N3H10.8°0.0°
C2N3C4C51.0°0.0°
C2N3C4H1180.0°180.0°
C2N3C4O4177.5°180.0°
C5C4N3O4178.6°179.9°
C5C4N3H1179.0°180.0°
C4C5C6H3179.2°180.0°
N3C4C5H2178.9°180.0°
O4C4N3H12.4°0.1°
O4C4C5H22.4°0.1°
H2C5C6H30.8°0.1°
H4C1'C2'H660.4°57.6°
H5C1BC2BH9165.9°160.2°
H6C2'C3'H11176.0°177.1°
H6C2'N2'H26137.6°144.9°
H7O2'C2BH959.9°56.4°
H9C2BC3BH1334.9°21.5°
H11C3'O3'H1263.9°59.8°
H11C3'C4'H15162.4°177.2°
H13C3BO3BH1454.5°61.1°
H13C3BC4BH17107.0°123.8°
H15C4'O4'H1662.1°59.9°
H15C4'C5'H18162.4°177.7°
H17C4BC5BH1961.0°66.0°
H17C4BC5BH2059.9°173.9°
H18C5'C6'H2170.3°65.0°
H18C5'C6'H2249.5°175.1°
H23C8'H24H25120.0°120.0°

222415

PDB entries from 2024-07-10

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