Obsolete: UBR

UBR was replaced with BRU on

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O1'	P	doub	1.48Å	1.60Å
O5'	P	sing	1.61Å	1.59Å
P	OP1	sing	1.61Å	1.48Å
P	OP2	sing	1.61Å	1.49Å
OP1	HOP1	sing	0.97Å	0.95Å
OP2	HOP2	sing	0.97Å	0.95Å
C5'	O5'	sing	1.43Å	1.43Å
C4'	C5'	sing	1.53Å	1.51Å
C5'	H5'	sing	1.09Å	1.10Å
C5'	H5'A	sing	1.09Å	1.10Å
O4'	C4'	sing	1.44Å	1.45Å
C4'	C3'	sing	1.55Å	1.53Å
C4'	H4'	sing	1.09Å	1.10Å
O4'	C1'	sing	1.44Å	1.42Å
C2'	C3'	sing	1.55Å	1.52Å
C3'	O3'	sing	1.43Å	1.43Å
C3'	H3'	sing	1.09Å	1.10Å
O3'	HO3'	sing	0.97Å	0.95Å
C1'	C2'	sing	1.54Å	1.52Å
C2'	H2'	sing	1.09Å	1.10Å
C2'	H2'A	sing	1.09Å	1.10Å
N1	C1'	sing	1.46Å	1.49Å
C1'	H1'	sing	1.09Å	1.10Å
C2	N1	sing	1.35Å	1.38Å
N1	C6	sing	1.37Å	1.38Å
O2	C2	doub	1.22Å	1.22Å
N3	C2	sing	1.35Å	1.37Å
N3	C4	sing	1.35Å	1.38Å
N3	HN3	sing	0.97Å	1.00Å
O4	C4	doub	1.22Å	1.24Å
C4	C5	sing	1.42Å	1.45Å
C5	C6	doub	1.35Å	1.33Å
C5	BR	sing	1.89Å	1.84Å
C6	H6	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1'	P	O5'	100.4°	109.4°
O1'	P	OP1	108.6°	109.5°
O1'	P	OP2	110.8°	109.5°
O5'	P	OP1	107.1°	109.5°
O5'	P	OP2	109.5°	109.5°
P	O5'	C5'	120.1°	123.0°
OP1	P	OP2	118.8°	109.5°
P	OP1	HOP1	109.5°	114.0°
P	OP2	HOP2	109.5°	114.0°
O5'	C5'	C4'	111.2°	109.5°
O5'	C5'	H5'	108.9°	109.5°
O5'	C5'	H5'A	108.5°	109.4°
C4'	C5'	H5'	108.9°	109.5°
C4'	C5'	H5'A	108.5°	109.5°
C5'	C4'	O4'	110.9°	110.4°
C5'	C4'	C3'	116.2°	110.4°
C5'	C4'	H4'	102.7°	110.3°
H5'	C5'	H5'A	110.8°	109.4°
O4'	C4'	C3'	106.2°	104.8°
O4'	C4'	H4'	113.4°	110.5°
C4'	O4'	C1'	109.1°	105.3°
C3'	C4'	H4'	107.7°	110.4°
C4'	C3'	C2'	105.2°	104.0°
C4'	C3'	O3'	119.0°	110.5°
C4'	C3'	H3'	109.8°	110.5°
O4'	C1'	C2'	105.3°	104.8°
O4'	C1'	N1	108.0°	110.3°
O4'	C1'	H1'	114.4°	110.3°
C2'	C3'	O3'	118.5°	110.5°
C2'	C3'	H3'	110.5°	110.6°
C3'	C2'	C1'	104.8°	104.1°
C3'	C2'	H2'	111.0°	110.5°
C3'	C2'	H2'A	112.0°	110.5°
O3'	C3'	H3'	92.9°	110.5°
C3'	O3'	HO3'	109.5°	114.0°
C1'	C2'	H2'	111.0°	110.5°
C1'	C2'	H2'A	112.1°	110.6°
C2'	C1'	N1	113.2°	110.4°
C2'	C1'	H1'	109.3°	110.4°
H2'	C2'	H2'A	106.0°	110.5°
N1	C1'	H1'	106.7°	110.5°
C1'	N1	C2	119.3°	119.7°
C1'	N1	C6	119.8°	119.7°
C2	N1	C6	120.9°	120.6°
N1	C2	O2	123.8°	119.5°
N1	C2	N3	114.4°	121.0°
N1	C6	C5	123.8°	119.6°
N1	C6	H6	118.1°	120.2°
O2	C2	N3	121.8°	119.5°
C2	N3	C4	127.7°	120.2°
C2	N3	HN3	116.1°	119.9°
C4	N3	HN3	116.2°	119.9°
N3	C4	O4	119.8°	120.3°
N3	C4	C5	114.6°	119.4°
O4	C4	C5	125.7°	120.3°
C4	C5	C6	118.5°	119.1°
C4	C5	BR	118.8°	120.5°
C6	C5	BR	122.7°	120.4°
C5	C6	H6	118.1°	120.2°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1'	P	O5'	OP1	113.3°	120.0°
O1'	P	O5'	OP2	116.6°	120.0°
O1'	P	OP1	OP2	127.8°	120.0°
O1'	P	OP1	HOP1	6.4°	180.0°
O1'	P	OP2	HOP2	0.2°	60.1°
O1'	P	O5'	C5'	53.1°	55.0°
O5'	P	OP1	OP2	124.5°	120.0°
O5'	P	OP1	HOP1	101.2°	60.0°
O5'	P	OP2	HOP2	110.1°	180.0°
P	O5'	C5'	C4'	165.9°	180.0°
P	O5'	C5'	H5'	74.1°	60.0°
P	O5'	C5'	H5'A	46.6°	60.0°
OP1	P	OP2	HOP2	126.5°	60.0°
OP1	P	O5'	C5'	60.2°	65.0°
OP2	P	OP1	HOP1	134.2°	60.0°
OP2	P	O5'	C5'	169.8°	175.0°
O5'	C5'	C4'	H5'	120.0°	120.0°
O5'	C5'	C4'	H5'A	119.3°	120.0°
O5'	C5'	H5'	H5'A	119.3°	119.9°
O5'	C5'	C4'	O4'	72.5°	69.6°
O5'	C5'	C4'	C3'	48.8°	175.0°
O5'	C5'	C4'	H4'	166.1°	52.7°
C4'	C5'	H5'	H5'A	119.3°	120.0°
C5'	C4'	O4'	C3'	127.1°	118.8°
C5'	C4'	O4'	H4'	114.9°	122.3°
C5'	C4'	C3'	H4'	114.4°	122.2°
C5'	C4'	O4'	C1'	150.7°	159.4°
C5'	C4'	C3'	C2'	129.4°	142.8°
C5'	C4'	C3'	O3'	94.8°	98.6°
C5'	C4'	C3'	H3'	10.4°	24.1°
H5'	C5'	C4'	O4'	167.5°	50.4°
H5'	C5'	C4'	C3'	71.2°	65.0°
H5'	C5'	C4'	H4'	46.1°	172.7°
H5'A	C5'	C4'	O4'	46.7°	170.4°
H5'A	C5'	C4'	C3'	168.1°	55.0°
H5'A	C5'	C4'	H4'	74.6°	67.3°
O4'	C4'	C3'	H4'	121.7°	118.9°
O4'	C4'	C3'	C2'	5.6°	24.0°
O4'	C4'	C3'	O3'	141.4°	142.6°
O4'	C4'	C3'	H3'	113.4°	94.8°
C4'	O4'	C1'	C2'	31.8°	40.6°
C4'	O4'	C1'	N1	153.1°	159.3°
C4'	O4'	C1'	H1'	88.3°	78.3°
C3'	C4'	O4'	C1'	23.6°	40.5°
C4'	C3'	C2'	O3'	136.1°	118.6°
C4'	C3'	C2'	H3'	118.5°	118.7°
C4'	C3'	O3'	H3'	114.7°	122.6°
C4'	C3'	O3'	HO3'	147.6°	180.0°
C4'	C3'	C2'	C1'	12.7°	0.0°
C4'	C3'	C2'	H2'	107.3°	118.6°
C4'	C3'	C2'	H2'A	134.4°	118.8°
H4'	C4'	O4'	C1'	94.5°	78.4°
H4'	C4'	C3'	C2'	116.2°	95.0°
H4'	C4'	C3'	O3'	19.6°	23.7°
H4'	C4'	C3'	H3'	124.8°	146.3°
O4'	C1'	C2'	C3'	27.0°	24.0°
O4'	C1'	C2'	N1	117.8°	118.8°
O4'	C1'	C2'	H1'	123.4°	118.8°
O4'	C1'	C2'	H2'	93.0°	94.7°
O4'	C1'	C2'	H2'A	148.7°	142.7°
O4'	C1'	N1	H1'	123.5°	122.3°
O4'	C1'	N1	C2	125.9°	53.8°
O4'	C1'	N1	C6	54.8°	126.4°
C2'	C3'	O3'	H3'	115.3°	122.8°
C2'	C3'	O3'	HO3'	82.3°	65.4°
C3'	C2'	C1'	H2'	120.0°	118.7°
C3'	C2'	C1'	H2'A	121.7°	118.7°
C3'	C2'	H2'	H2'A	121.9°	122.6°
C3'	C2'	C1'	N1	144.8°	142.8°
C3'	C2'	C1'	H1'	96.4°	94.8°
O3'	C3'	C2'	C1'	123.4°	118.6°
O3'	C3'	C2'	H2'	116.6°	122.7°
O3'	C3'	C2'	H2'A	1.6°	0.1°
H3'	C3'	O3'	HO3'	33.0°	57.4°
H3'	C3'	C2'	C1'	131.2°	118.7°
H3'	C3'	C2'	H2'	11.2°	0.0°
H3'	C3'	C2'	H2'A	107.0°	122.6°
C1'	C2'	H2'	H2'A	121.9°	122.7°
C2'	C1'	N1	H1'	120.3°	122.4°
C2'	C1'	N1	C2	117.9°	61.5°
C2'	C1'	N1	C6	61.4°	118.2°
H2'	C2'	C1'	N1	24.8°	24.1°
H2'	C2'	C1'	H1'	143.6°	146.5°
H2'A	C2'	C1'	N1	93.5°	98.6°
H2'A	C2'	C1'	H1'	25.3°	23.9°
C1'	N1	C2	C6	179.3°	179.7°
C1'	N1	C2	O2	2.3°	0.1°
C1'	N1	C2	N3	178.3°	180.0°
C1'	N1	C6	C5	177.7°	179.8°
C1'	N1	C6	H6	2.3°	0.0°
H1'	C1'	N1	C2	2.4°	176.1°
H1'	C1'	N1	C6	178.2°	4.2°
N1	C2	O2	N3	179.4°	179.9°
N1	C2	N3	C4	1.2°	0.1°
N1	C2	N3	HN3	178.8°	180.0°
C2	N1	C6	C5	1.6°	0.5°
C2	N1	C6	H6	178.4°	179.7°
C6	N1	C2	O2	178.4°	179.8°
C6	N1	C2	N3	1.0°	0.3°
N1	C6	C5	C4	2.0°	0.5°
N1	C6	C5	H6	180.0°	179.8°
N1	C6	C5	BR	176.9°	179.8°
O2	C2	N3	C4	178.3°	180.0°
O2	C2	N3	HN3	1.8°	0.0°
C2	N3	C4	HN3	180.0°	180.0°
C2	N3	C4	O4	177.9°	180.0°
C2	N3	C4	C5	1.5°	0.1°
N3	C4	O4	C5	179.4°	180.0°
N3	C4	C5	C6	1.8°	0.3°
N3	C4	C5	BR	177.1°	180.0°
HN3	N3	C4	O4	2.1°	0.0°
HN3	N3	C4	C5	178.4°	180.0°
O4	C4	C5	C6	177.6°	179.7°
O4	C4	C5	BR	3.4°	0.0°
C4	C5	C6	BR	178.9°	179.7°
C4	C5	C6	H6	178.0°	179.7°
BR	C5	C6	H6	3.1°	0.0°

Definition date:	2008-03-26
Last modified:	2009-04-07
Release status:	OBS
Processing site:	RCSB
Replaced by:	BRU
Derived from:	1FYL