UBE
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N9 | C8 | sing | 1.47Å | 1.46Å | |
| O11 | C10 | doub | 1.21Å | 1.26Å | |
| O24 | C22 | doub | 1.22Å | 1.25Å | |
| C10 | C8 | sing | 1.51Å | 1.50Å | |
| C10 | O12 | sing | 1.34Å | 1.25Å | |
| C8 | C7 | sing | 1.53Å | 1.54Å | |
| C22 | O23 | sing | 1.35Å | 1.25Å | |
| C22 | C21 | sing | 1.46Å | 1.48Å | |
| C16 | N3 | sing | 1.46Å | 1.45Å | |
| C16 | C17 | sing | 1.51Å | 1.48Å | |
| O14 | C2 | doub | 1.22Å | 1.25Å | |
| N3 | C2 | sing | 1.35Å | 1.40Å | |
| N3 | C4 | sing | 1.35Å | 1.41Å | |
| C2 | C1 | sing | 1.42Å | 1.48Å | |
| O15 | C4 | doub | 1.22Å | 1.25Å | |
| C4 | N5 | sing | 1.35Å | 1.42Å | |
| C1 | C13 | sing | 1.51Å | 1.51Å | |
| C1 | C6 | doub | 1.35Å | 1.39Å | |
| N5 | C6 | sing | 1.37Å | 1.34Å | |
| N5 | C7 | sing | 1.46Å | 1.47Å | |
| C21 | C17 | doub | 1.37Å | 1.48Å | Aromatic |
| C21 | S20 | sing | 1.76Å | 1.71Å | Aromatic |
| C17 | C18 | sing | 1.37Å | 1.40Å | Aromatic |
| C18 | C19 | doub | 1.36Å | 1.39Å | Aromatic |
| S20 | C19 | sing | 1.76Å | 1.74Å | Aromatic |
| C19 | C25 | sing | 1.48Å | 1.49Å | Aromatic |
| C25 | C30 | doub | 1.40Å | 1.40Å | Aromatic |
| C25 | C26 | sing | 1.40Å | 1.39Å | Aromatic |
| C30 | C29 | sing | 1.38Å | 1.40Å | Aromatic |
| C26 | C27 | doub | 1.38Å | 1.40Å | Aromatic |
| C29 | C28 | doub | 1.38Å | 1.40Å | Aromatic |
| C27 | C28 | sing | 1.38Å | 1.40Å | Aromatic |
| O23 | HO23 | sing | 0.97Å | 0.95Å | |
| C30 | H30 | sing | 1.08Å | 1.08Å | |
| C29 | H29 | sing | 1.08Å | 1.08Å | |
| C28 | H28 | sing | 1.08Å | 1.08Å | |
| C27 | H27 | sing | 1.08Å | 1.08Å | |
| C26 | H26 | sing | 1.08Å | 1.08Å | |
| C18 | H18 | sing | 1.08Å | 1.08Å | |
| C16 | H161 | sing | 1.09Å | 1.10Å | |
| C16 | H162 | sing | 1.09Å | 1.10Å | |
| C13 | H131 | sing | 1.09Å | 1.10Å | |
| C13 | H132 | sing | 1.09Å | 1.10Å | |
| C13 | H133 | sing | 1.09Å | 1.10Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| C7 | H71 | sing | 1.09Å | 1.10Å | |
| C7 | H72 | sing | 1.09Å | 1.10Å | |
| C8 | H8 | sing | 1.09Å | 1.10Å | |
| N9 | HN91 | sing | 1.01Å | 1.00Å | |
| N9 | HN92 | sing | 1.01Å | 1.00Å | |
| O12 | HO12 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N9 | C8 | C10 | 109.7° | 109.5° |
| N9 | C8 | C7 | 111.7° | 109.5° |
| N9 | C8 | H8 | 108.4° | 109.5° |
| C8 | N9 | HN91 | 109.5° | 111.0° |
| C8 | N9 | HN92 | 109.5° | 111.0° |
| O11 | C10 | C8 | 118.2° | 120.0° |
| O11 | C10 | O12 | 122.7° | 120.0° |
| O24 | C22 | O23 | 124.0° | 119.9° |
| O24 | C22 | C21 | 118.3° | 120.0° |
| C8 | C10 | O12 | 119.2° | 120.1° |
| C10 | C8 | C7 | 111.2° | 109.5° |
| C10 | C8 | H8 | 109.0° | 109.4° |
| C10 | O12 | HO12 | 109.5° | 117.0° |
| C8 | C7 | N5 | 107.1° | 109.5° |
| C8 | C7 | H71 | 110.3° | 109.5° |
| C8 | C7 | H72 | 110.8° | 109.5° |
| C7 | C8 | H8 | 106.8° | 109.5° |
| O23 | C22 | C21 | 117.7° | 120.0° |
| C22 | O23 | HO23 | 109.5° | 114.0° |
| C22 | C21 | C17 | 128.7° | 125.2° |
| C22 | C21 | S20 | 121.3° | 125.2° |
| N3 | C16 | C17 | 112.0° | 109.4° |
| C16 | N3 | C2 | 117.0° | 119.9° |
| C16 | N3 | C4 | 122.8° | 119.9° |
| N3 | C16 | H161 | 108.6° | 109.5° |
| N3 | C16 | H162 | 108.1° | 109.5° |
| C16 | C17 | C21 | 121.8° | 122.6° |
| C16 | C17 | C18 | 126.1° | 122.7° |
| C17 | C16 | H161 | 108.7° | 109.4° |
| C17 | C16 | H162 | 108.1° | 109.4° |
| O14 | C2 | N3 | 120.4° | 120.3° |
| O14 | C2 | C1 | 121.0° | 120.3° |
| C2 | N3 | C4 | 120.2° | 120.2° |
| N3 | C2 | C1 | 118.5° | 119.4° |
| N3 | C4 | O15 | 121.2° | 119.5° |
| N3 | C4 | N5 | 119.4° | 121.0° |
| C2 | C1 | C13 | 120.1° | 120.4° |
| C2 | C1 | C6 | 118.4° | 119.2° |
| O15 | C4 | N5 | 119.4° | 119.5° |
| C4 | N5 | C6 | 121.4° | 120.6° |
| C4 | N5 | C7 | 119.2° | 119.7° |
| C13 | C1 | C6 | 121.5° | 120.4° |
| C1 | C13 | H131 | 109.5° | 109.5° |
| C1 | C13 | H132 | 109.5° | 109.5° |
| C1 | C13 | H133 | 109.5° | 109.5° |
| C1 | C6 | N5 | 122.0° | 119.7° |
| C1 | C6 | H6 | 119.0° | 120.2° |
| C6 | N5 | C7 | 119.4° | 119.7° |
| N5 | C6 | H6 | 119.0° | 120.1° |
| N5 | C7 | H71 | 110.3° | 109.5° |
| N5 | C7 | H72 | 110.8° | 109.4° |
| C17 | C21 | S20 | 110.1° | 109.6° |
| C21 | C17 | C18 | 112.1° | 114.7° |
| C21 | S20 | C19 | 92.7° | 91.2° |
| C17 | C18 | C19 | 113.0° | 114.8° |
| C17 | C18 | H18 | 123.5° | 122.5° |
| C18 | C19 | S20 | 112.2° | 109.7° |
| C18 | C19 | C25 | 130.2° | 125.1° |
| C19 | C18 | H18 | 123.5° | 122.6° |
| S20 | C19 | C25 | 117.6° | 125.2° |
| C19 | C25 | C30 | 117.4° | 120.1° |
| C19 | C25 | C26 | 121.6° | 120.1° |
| C30 | C25 | C26 | 120.9° | 119.7° |
| C25 | C30 | C29 | 119.9° | 119.9° |
| C25 | C30 | H30 | 120.0° | 120.1° |
| C25 | C26 | C27 | 119.2° | 119.9° |
| C25 | C26 | H26 | 120.4° | 120.1° |
| C30 | C29 | C28 | 119.1° | 120.1° |
| C29 | C30 | H30 | 120.0° | 120.0° |
| C30 | C29 | H29 | 120.4° | 119.9° |
| C26 | C27 | C28 | 119.9° | 120.1° |
| C26 | C27 | H27 | 120.0° | 119.9° |
| C27 | C26 | H26 | 120.4° | 120.1° |
| C29 | C28 | C27 | 120.9° | 120.3° |
| C28 | C29 | H29 | 120.4° | 119.9° |
| C29 | C28 | H28 | 119.6° | 119.8° |
| C27 | C28 | H28 | 119.6° | 119.9° |
| C28 | C27 | H27 | 120.0° | 119.9° |
| H161 | C16 | H162 | 111.4° | 109.5° |
| H131 | C13 | H132 | 109.5° | 109.4° |
| H131 | C13 | H133 | 109.4° | 109.4° |
| H132 | C13 | H133 | 109.5° | 109.5° |
| H71 | C7 | H72 | 107.6° | 109.4° |
| HN91 | N9 | HN92 | 109.5° | 111.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N9 | C8 | C10 | O11 | 0.9° | 20.0° |
| N9 | C8 | C10 | C7 | 124.0° | 120.0° |
| N9 | C8 | C10 | H8 | 118.6° | 120.0° |
| N9 | C8 | C10 | O12 | 178.0° | 160.0° |
| N9 | C8 | C7 | H8 | 118.4° | 120.0° |
| N9 | C8 | C7 | N5 | 48.7° | 55.0° |
| N9 | C8 | C7 | H71 | 71.3° | 175.0° |
| N9 | C8 | C7 | H72 | 169.6° | 65.0° |
| C8 | N9 | HN91 | HN92 | 120.0° | 123.9° |
| O11 | C10 | C8 | O12 | 178.9° | 180.0° |
| O11 | C10 | C8 | C7 | 123.1° | 100.0° |
| O11 | C10 | C8 | H8 | 119.4° | 140.0° |
| O11 | C10 | O12 | HO12 | 0.0° | 0.0° |
| O24 | C22 | O23 | C21 | 179.1° | 179.7° |
| O24 | C22 | C21 | C17 | 31.0° | 5.2° |
| O24 | C22 | C21 | S20 | 149.1° | 175.1° |
| O24 | C22 | O23 | HO23 | 0.0° | 0.0° |
| C10 | C8 | C7 | H8 | 118.8° | 119.9° |
| C10 | C8 | C7 | N5 | 171.5° | 175.0° |
| C10 | C8 | C7 | H71 | 51.5° | 64.9° |
| C10 | C8 | C7 | H72 | 67.6° | 55.1° |
| C10 | C8 | N9 | HN91 | 100.1° | 60.0° |
| C10 | C8 | N9 | HN92 | 139.8° | 176.0° |
| C8 | C10 | O12 | HO12 | 178.9° | 180.0° |
| O12 | C10 | C8 | C7 | 58.0° | 80.0° |
| O12 | C10 | C8 | H8 | 59.5° | 40.0° |
| C8 | C7 | N5 | C4 | 75.3° | 90.0° |
| C8 | C7 | N5 | C6 | 104.1° | 90.0° |
| C8 | C7 | N5 | H71 | 120.0° | 120.1° |
| C8 | C7 | N5 | H72 | 120.9° | 120.0° |
| C8 | C7 | H71 | H72 | 121.0° | 120.0° |
| C7 | C8 | N9 | HN91 | 23.6° | 60.0° |
| C7 | C8 | N9 | HN92 | 96.5° | 63.9° |
| O23 | C22 | C21 | C17 | 149.9° | 174.5° |
| O23 | C22 | C21 | S20 | 30.1° | 5.2° |
| C22 | C21 | C17 | C16 | 0.0° | 0.0° |
| C22 | C21 | C17 | S20 | 180.0° | 179.8° |
| C22 | C21 | C17 | C18 | 179.7° | 179.8° |
| C22 | C21 | S20 | C19 | 180.0° | 180.0° |
| C21 | C22 | O23 | HO23 | 179.1° | 179.7° |
| N3 | C16 | C17 | H161 | 120.0° | 120.0° |
| N3 | C16 | C17 | H162 | 119.0° | 120.0° |
| C16 | N3 | C2 | O14 | 1.1° | 0.0° |
| C16 | N3 | C2 | C4 | 178.3° | 179.7° |
| C16 | N3 | C2 | C1 | 178.2° | 180.0° |
| C16 | N3 | C4 | O15 | 1.9° | 0.0° |
| C16 | N3 | C4 | N5 | 178.1° | 180.0° |
| N3 | C16 | C17 | C21 | 151.9° | 178.3° |
| N3 | C16 | C17 | C18 | 28.4° | 1.9° |
| N3 | C16 | H161 | H162 | 119.0° | 120.1° |
| C17 | C16 | N3 | C2 | 109.2° | 89.0° |
| C17 | C16 | N3 | C4 | 72.5° | 90.8° |
| C16 | C17 | C21 | C18 | 179.7° | 179.8° |
| C16 | C17 | C21 | S20 | 180.0° | 179.8° |
| C16 | C17 | C18 | C19 | 179.8° | 179.7° |
| C16 | C17 | C18 | H18 | 0.2° | 0.0° |
| C17 | C16 | H161 | H162 | 119.0° | 120.0° |
| O14 | C2 | N3 | C1 | 179.3° | 179.9° |
| O14 | C2 | N3 | C4 | 179.5° | 179.8° |
| O14 | C2 | C1 | C13 | 0.9° | 0.1° |
| O14 | C2 | C1 | C6 | 179.6° | 180.0° |
| C2 | N3 | C4 | O15 | 179.9° | 179.7° |
| C2 | N3 | C4 | N5 | 0.1° | 0.3° |
| N3 | C2 | C1 | C13 | 179.8° | 180.0° |
| N3 | C2 | C1 | C6 | 0.3° | 0.1° |
| C2 | N3 | C16 | H161 | 130.7° | 31.0° |
| C2 | N3 | C16 | H162 | 9.7° | 151.0° |
| C4 | N3 | C2 | C1 | 0.2° | 0.3° |
| N3 | C4 | O15 | N5 | 180.0° | 180.0° |
| N3 | C4 | N5 | C6 | 0.3° | 0.0° |
| N3 | C4 | N5 | C7 | 179.1° | 180.0° |
| C4 | N3 | C16 | H161 | 47.6° | 149.3° |
| C4 | N3 | C16 | H162 | 168.6° | 29.2° |
| C2 | C1 | C13 | C6 | 179.5° | 179.9° |
| C2 | C1 | C6 | N5 | 0.5° | 0.2° |
| C2 | C1 | C13 | H131 | 97.9° | 0.1° |
| C2 | C1 | C13 | H132 | 22.1° | 120.0° |
| C2 | C1 | C13 | H133 | 142.2° | 119.9° |
| C2 | C1 | C6 | H6 | 179.5° | 179.9° |
| O15 | C4 | N5 | C6 | 179.7° | 180.0° |
| O15 | C4 | N5 | C7 | 0.9° | 0.1° |
| C4 | N5 | C6 | C1 | 0.5° | 0.2° |
| C4 | N5 | C6 | C7 | 179.4° | 179.9° |
| C4 | N5 | C6 | H6 | 179.5° | 180.0° |
| C4 | N5 | C7 | H71 | 164.7° | 150.0° |
| C4 | N5 | C7 | H72 | 45.6° | 30.1° |
| C13 | C1 | C6 | N5 | 180.0° | 179.7° |
| C1 | C13 | H131 | H132 | 120.0° | 120.0° |
| C1 | C13 | H131 | H133 | 120.0° | 120.1° |
| C1 | C13 | H132 | H133 | 120.0° | 120.1° |
| C13 | C1 | C6 | H6 | 0.0° | 0.0° |
| C1 | C6 | N5 | H6 | 180.0° | 179.7° |
| C1 | C6 | N5 | C7 | 178.9° | 179.7° |
| C6 | C1 | C13 | H131 | 81.6° | 180.0° |
| C6 | C1 | C13 | H132 | 158.4° | 60.0° |
| C6 | C1 | C13 | H133 | 38.4° | 60.0° |
| C6 | N5 | C7 | H71 | 15.9° | 30.1° |
| C6 | N5 | C7 | H72 | 135.0° | 150.0° |
| C7 | N5 | C6 | H6 | 1.1° | 0.0° |
| N5 | C7 | H71 | H72 | 121.0° | 119.9° |
| N5 | C7 | C8 | H8 | 69.7° | 65.0° |
| C21 | C17 | C18 | C19 | 0.5° | 0.5° |
| C17 | C21 | S20 | C19 | 0.0° | 0.2° |
| C21 | C17 | C18 | H18 | 179.5° | 179.8° |
| C21 | C17 | C16 | H161 | 31.9° | 58.3° |
| C21 | C17 | C16 | H162 | 89.2° | 61.7° |
| S20 | C21 | C17 | C18 | 0.3° | 0.4° |
| C21 | S20 | C19 | C18 | 0.2° | 0.0° |
| C21 | S20 | C19 | C25 | 179.1° | 180.0° |
| C17 | C18 | C19 | H18 | 180.0° | 179.7° |
| C17 | C18 | C19 | S20 | 0.5° | 0.2° |
| C17 | C18 | C19 | C25 | 179.2° | 179.7° |
| C18 | C17 | C16 | H161 | 148.4° | 121.9° |
| C18 | C17 | C16 | H162 | 90.5° | 118.1° |
| C18 | C19 | S20 | C25 | 178.9° | 179.9° |
| C18 | C19 | C25 | C30 | 52.8° | 180.0° |
| C18 | C19 | C25 | C26 | 126.8° | 0.3° |
| S20 | C19 | C25 | C30 | 125.9° | 0.1° |
| S20 | C19 | C25 | C26 | 54.6° | 179.6° |
| S20 | C19 | C18 | H18 | 179.5° | 180.0° |
| C19 | C25 | C30 | C26 | 179.5° | 179.7° |
| C19 | C25 | C30 | C29 | 180.0° | 180.0° |
| C19 | C25 | C26 | C27 | 179.9° | 179.7° |
| C19 | C25 | C30 | H30 | 0.1° | 0.0° |
| C19 | C25 | C26 | H26 | 0.1° | 0.1° |
| C25 | C19 | C18 | H18 | 0.9° | 0.0° |
| C25 | C30 | C29 | H30 | 180.0° | 179.9° |
| C30 | C25 | C26 | C27 | 0.4° | 0.6° |
| C25 | C30 | C29 | C28 | 0.3° | 0.0° |
| C25 | C30 | C29 | H29 | 179.7° | 180.0° |
| C30 | C25 | C26 | H26 | 179.6° | 179.8° |
| C26 | C25 | C30 | C29 | 0.4° | 0.3° |
| C25 | C26 | C27 | H26 | 180.0° | 179.6° |
| C25 | C26 | C27 | C28 | 0.3° | 0.6° |
| C26 | C25 | C30 | H30 | 179.6° | 179.7° |
| C25 | C26 | C27 | H27 | 179.7° | 179.7° |
| C30 | C29 | C28 | H29 | 180.0° | 180.0° |
| C30 | C29 | C28 | C27 | 0.2° | 0.1° |
| C30 | C29 | C28 | H28 | 179.8° | 180.0° |
| C26 | C27 | C28 | C29 | 0.2° | 0.2° |
| C26 | C27 | C28 | H27 | 180.0° | 179.8° |
| C26 | C27 | C28 | H28 | 179.8° | 179.7° |
| C29 | C28 | C27 | H28 | 180.0° | 179.9° |
| C28 | C29 | C30 | H30 | 179.7° | 179.9° |
| C29 | C28 | C27 | H27 | 179.8° | 180.0° |
| C27 | C28 | C29 | H29 | 179.8° | 179.9° |
| C28 | C27 | C26 | H26 | 179.7° | 179.8° |
| H30 | C30 | C29 | H29 | 0.3° | 0.1° |
| H29 | C29 | C28 | H28 | 0.2° | 0.0° |
| H28 | C28 | C27 | H27 | 0.2° | 0.1° |
| H27 | C27 | C26 | H26 | 0.3° | 0.0° |
| H131 | C13 | H132 | H133 | 120.0° | 119.9° |
| H71 | C7 | C8 | H8 | 170.3° | 55.0° |
| H72 | C7 | C8 | H8 | 51.2° | 175.0° |
| H8 | C8 | N9 | HN91 | 141.0° | 180.0° |
| H8 | C8 | N9 | HN92 | 21.0° | 56.1° |






