Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

U9C

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
SC2sing1.77Å1.72ÅAromatic
SN1sing1.69Å1.67ÅAromatic
C1C2doub1.39Å1.40ÅAromatic
C1Csing1.38Å1.40ÅAromatic
NC7sing1.40Å1.42Å
NCsing1.40Å1.42Å
C12C7doub1.39Å1.39ÅAromatic
C12C11sing1.38Å1.39ÅAromatic
C7C8sing1.39Å1.39ÅAromatic
C11C10doub1.39Å1.40ÅAromatic
N3C10sing1.40Å1.39Å
C10C9sing1.39Å1.39ÅAromatic
C8C9doub1.38Å1.38ÅAromatic
C2C4sing1.41Å1.40ÅAromatic
CC6doub1.40Å1.39ÅAromatic
N1C3doub1.29Å1.31ÅAromatic
C4C3sing1.45Å1.47ÅAromatic
C4C5doub1.41Å1.38ÅAromatic
C3N2sing1.40Å1.34Å
C6C5sing1.36Å1.38ÅAromatic
C1H1sing1.08Å1.08Å
C5H2sing1.08Å1.08Å
C6H3sing1.08Å1.08Å
C8H4sing1.08Å1.08Å
C9H5sing1.08Å1.08Å
C11H6sing1.08Å1.08Å
C12H7sing1.08Å1.08Å
NH8sing0.97Å1.00Å
N2H9sing0.97Å1.00Å
N2H10sing0.97Å1.00Å
N3H11sing0.97Å1.00Å
N3H12sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2SN194.9°96.2°
SC2C1128.8°133.4°
SC2C4109.5°105.6°
SN1C3110.6°109.0°
C2C1C118.4°119.6°
C1C2C4121.7°121.0°
C2C1H1120.8°120.2°
C1CN121.8°120.1°
C1CC6120.1°119.9°
CC1H1120.8°120.2°
C7NC130.9°120.0°
NC7C12119.4°120.0°
NC7C8121.6°120.0°
C7NH8114.5°120.0°
NCC6118.1°120.1°
CNH8114.5°120.0°
C7C12C11120.4°120.0°
C12C7C8119.0°120.0°
C7C12H7119.8°120.0°
C12C11C10120.8°120.0°
C12C11H6119.6°120.0°
C11C12H7119.8°120.0°
C7C8C9120.6°120.0°
C7C8H4119.7°120.0°
C11C10N3120.9°120.0°
C11C10C9118.4°120.0°
C10C11H6119.6°120.0°
N3C10C9120.7°120.0°
C10N3H11109.5°120.0°
C10N3H12109.5°120.0°
C10C9C8120.8°120.0°
C10C9H5119.6°120.0°
C9C8H4119.7°120.0°
C8C9H5119.6°120.0°
C2C4C3108.9°111.5°
C2C4C5118.6°118.0°
CC6C5120.7°121.1°
CC6H3119.7°119.5°
N1C3C4116.1°117.6°
N1C3N2120.1°121.2°
C3C4C5132.5°130.4°
C4C3N2123.8°121.2°
C4C5C6120.5°120.5°
C4C5H2119.7°119.8°
C3N2H9109.5°120.0°
C3N2H10109.5°120.0°
C6C5H2119.7°119.8°
C5C6H3119.7°119.5°
H9N2H10109.4°120.0°
H11N3H12109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
SC2C1C4179.7°179.9°
SC2C1C178.2°180.0°
C2SN1C30.5°0.0°
SC2C4C31.0°0.1°
SC2C4C5178.4°180.0°
SC2C1H11.8°0.3°
N1SC2C1179.3°180.0°
N1SC2C40.9°0.0°
SN1C3C40.0°0.1°
SN1C3N2178.9°180.0°
C2C1CH1180.0°179.7°
C2C1CN178.9°180.0°
C2C1CC60.4°0.0°
C1C2C4C3179.2°180.0°
C1C2C4C51.3°0.1°
C1CNC7159.0°154.9°
C1CNC6179.4°179.9°
CC1C2C41.5°0.0°
C1CC6C50.8°0.1°
C1CC6H3179.1°180.0°
C1CNH821.0°25.2°
C7NCH8180.0°180.0°
NC7C12C8178.5°179.8°
NC7C12C11177.8°179.7°
NC7C8C9177.8°179.7°
C7NCC621.6°25.2°
NC7C8H42.2°0.3°
NC7C12H72.2°0.2°
CNC7C12163.5°32.6°
CNC7C818.0°147.7°
NCC6C5179.8°180.0°
NCC1H11.0°0.3°
NCC6H30.3°0.1°
C7C12C11H7180.0°180.0°
C7C12C11C100.1°0.0°
C12C7C8C90.6°0.1°
C12C7C8H4179.3°180.0°
C7C12C11H6179.9°180.0°
C12C7NH816.4°147.5°
C11C12C7C80.7°0.0°
C12C11C10H6180.0°180.0°
C12C11C10N3178.4°180.0°
C12C11C10C90.6°0.1°
C7C8C9C100.0°0.1°
C7C8C9H4180.0°180.0°
C7C8C9H5180.0°180.0°
C8C7C12H7179.3°180.0°
C8C7NH8162.0°32.3°
C11C10N3C9178.9°179.9°
C11C10C9C80.6°0.1°
C11C10C9H5179.4°180.0°
C10C11C12H7179.9°180.0°
C11C10N3H11180.0°180.0°
C11C10N3H1260.0°0.0°
N3C10C9C8178.3°180.0°
N3C10C9H51.7°0.1°
N3C10C11H61.7°0.0°
C10N3H11H12120.0°179.9°
C10C9C8H5180.0°179.9°
C10C9C8H4180.0°179.9°
C9C10C11H6179.4°180.0°
C9C10N3H111.1°0.1°
C9C10N3H12118.9°180.0°
C2C4C3N10.7°0.1°
C2C4C3C5179.4°179.9°
C2C4C3N2178.1°179.9°
C2C4C5C60.0°0.1°
C4C2C1H1178.5°179.6°
C2C4C5H2180.0°180.0°
CC6C5C41.0°0.1°
CC6C5H3180.0°179.9°
C6CC1H1179.6°179.6°
CC6C5H2178.9°180.0°
C6CNH8158.4°154.8°
N1C3C4N2178.9°179.9°
N1C3C4C5178.6°180.0°
N1C3N2H90.0°180.0°
N1C3N2H10120.0°0.0°
C3C4C5C6179.4°180.0°
C3C4C5H20.7°0.1°
C4C3N2H9178.8°0.0°
C4C3N2H1058.8°179.9°
C5C4C3N22.5°0.0°
C4C5C6H2180.0°179.9°
C4C5C6H3178.9°180.0°
C3N2H9H10120.0°179.9°
H2C5C6H31.1°0.0°
H4C8C9H50.0°0.0°
H6C11C12H70.1°0.0°

250359

PDB entries from 2026-03-11

PDB statisticsPDBj update infoContact PDBjnumon