Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

U6Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N5C27sing1.47Å1.53Å
N5C28sing1.35Å1.48Å
C27C26sing1.54Å1.53Å
C23C21sing1.53Å1.54Å
C23C22sing1.53Å1.53Å
O5C20doub1.21Å1.20Å
C28O6doub1.21Å1.19Å
C28C25sing1.51Å1.48Å
C26C25sing1.55Å1.50Å
C21C22sing1.53Å1.52Å
C21N4sing1.46Å1.48Å
C25C24sing1.53Å1.55Å
C20N4sing1.35Å1.48Å
C20C19sing1.51Å1.55Å
C24C18sing1.53Å1.50Å
C18C19sing1.53Å1.53Å
C18N3sing1.46Å1.45Å
C19O4sing1.43Å1.41Å
O7C17doub1.21Å1.20Å
N3C17sing1.35Å1.43Å
O3C5doub1.21Å1.20Å
C17C4sing1.51Å1.50Å
C5C6sing1.51Å1.57Å
C5N1sing1.34Å1.47Å
C6C7sing1.55Å1.53Å
C14C13doub1.38Å1.40ÅAromatic
C14C15sing1.38Å1.41ÅAromatic
C13C12sing1.38Å1.39ÅAromatic
C4N1sing1.47Å1.44Å
C4C3sing1.53Å1.51Å
N1C16sing1.47Å1.45Å
C7C16sing1.54Å1.52Å
C7N2sing1.47Å1.47Å
O2C8doub1.21Å1.22Å
C15C10doub1.38Å1.40ÅAromatic
C12C11doub1.38Å1.41ÅAromatic
C3C2sing1.53Å1.55Å
C8N2sing1.35Å1.45Å
C8O1sing1.35Å1.41Å
C10C11sing1.38Å1.43ÅAromatic
C10C9sing1.51Å1.56Å
C2C29sing1.53Å1.56Å
C2C1sing1.53Å1.57Å
C9O1sing1.45Å1.44Å
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C2H4sing1.09Å1.10Å
C3H5sing1.09Å1.10Å
C3H6sing1.09Å1.10Å
C4H7sing1.09Å1.10Å
C6H8sing1.09Å1.10Å
C6H9sing1.09Å1.10Å
C7H10sing1.09Å1.10Å
N2H11sing0.97Å1.00Å
C9H12sing1.09Å1.10Å
C9H13sing1.09Å1.10Å
C11H14sing1.08Å1.08Å
C12H15sing1.08Å1.08Å
C13H16sing1.08Å1.08Å
C14H17sing1.08Å1.08Å
C15H18sing1.08Å1.08Å
C16H19sing1.09Å1.10Å
C16H20sing1.09Å1.10Å
N3H21sing0.97Å1.00Å
C18H22sing1.09Å1.10Å
C19H23sing1.09Å1.10Å
O4H24sing0.97Å0.95Å
N4H25sing0.97Å1.00Å
C21H26sing1.09Å1.10Å
C22H27sing1.09Å1.10Å
C22H28sing1.09Å1.10Å
C23H29sing1.09Å1.10Å
C23H30sing1.09Å1.10Å
C24H31sing1.09Å1.10Å
C24H32sing1.09Å1.10Å
C25H33sing1.09Å1.10Å
C26H34sing1.09Å1.10Å
C26H35sing1.09Å1.10Å
C27H36sing1.09Å1.10Å
C27H37sing1.09Å1.10Å
N5H38sing0.97Å1.00Å
C29H39sing1.09Å1.10Å
C29H40sing1.09Å1.10Å
C29H41sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C27N5C28109.4°111.3°
N5C27C26104.6°105.5°
N5C27H36110.7°110.2°
N5C27H37110.7°110.3°
C27N5H38125.3°124.3°
N5C28O6126.7°124.9°
N5C28C25107.6°110.0°
C28N5H38125.3°124.4°
C27C26C25107.7°101.8°
C27C26H34109.9°111.0°
C27C26H35109.9°111.0°
C26C27H36110.7°110.3°
C26C27H37110.6°110.3°
C21C23C2259.2°60.0°
C23C21C2260.3°60.0°
C23C21N4116.2°117.5°
C23C21H26116.6°117.5°
C21C23H29120.1°117.5°
C21C23H30120.1°117.5°
C23C22C2160.5°60.0°
C23C22H27119.9°117.5°
C23C22H28119.9°117.5°
C22C23H29120.1°117.5°
C22C23H30120.1°117.5°
O5C20N4120.7°120.0°
O5C20C19121.8°119.9°
O6C28C25125.5°125.1°
C28C25C26108.4°104.3°
C28C25C24106.1°110.5°
C28C25H33109.9°110.4°
C26C25C24113.5°110.5°
C26C25H33109.8°110.5°
C25C26H34109.9°110.9°
C25C26H35109.9°110.9°
C22C21N4116.6°117.5°
C22C21H26116.9°117.4°
C21C22H27119.9°117.5°
C21C22H28119.9°117.5°
C21N4C20120.4°120.0°
C21N4H25119.8°120.0°
N4C21H26117.7°115.6°
C25C24C18109.5°109.5°
C25C24H31109.5°109.5°
C25C24H32109.5°109.5°
C24C25H33109.0°110.5°
N4C20C19117.5°120.1°
C20N4H25119.8°120.0°
C20C19C18111.4°109.5°
C20C19O4101.9°109.5°
C20C19H23111.8°109.5°
C24C18C19110.0°109.5°
C24C18N3112.0°109.5°
C24C18H22110.5°109.4°
C18C24H31109.5°109.5°
C18C24H32109.5°109.4°
C19C18N3103.0°109.5°
C18C19O4105.3°109.5°
C19C18H22110.0°109.5°
C18C19H23112.0°109.5°
C18N3C17119.7°120.0°
C18N3H21120.2°120.0°
N3C18H22111.2°109.5°
O4C19H23113.9°109.4°
C19O4H24109.5°114.0°
O7C17N3120.5°120.0°
O7C17C4123.8°120.0°
N3C17C4115.6°120.0°
C17N3H21120.1°120.0°
O3C5C6130.8°125.0°
O3C5N1121.6°124.9°
C17C4N1107.8°109.4°
C17C4C3107.9°109.5°
C17C4H7109.2°109.5°
C6C5N1107.5°110.1°
C5C6C7101.2°104.2°
C5C6H8111.5°110.5°
C5C6H9111.5°110.5°
C5N1C4119.1°124.4°
C5N1C16112.4°111.3°
C6C7C16110.1°101.8°
C6C7N2112.3°110.9°
C7C6H8111.5°110.5°
C7C6H9111.5°110.5°
C6C7H10109.8°111.0°
C13C14C15122.5°120.0°
C14C13C12118.8°120.0°
C14C13H16120.6°120.1°
C13C14H17118.7°120.0°
C14C15C10119.7°120.0°
C15C14H17118.8°120.0°
C14C15H18120.1°120.0°
C13C12C11119.4°120.0°
C13C12H15120.3°120.0°
C12C13H16120.6°120.0°
N1C4C3112.6°109.5°
C4N1C16128.5°124.3°
N1C4H7110.1°109.5°
C4C3C2112.3°109.5°
C4C3H5108.7°109.5°
C4C3H6108.7°109.5°
C3C4H7109.2°109.5°
N1C16C7103.5°105.6°
N1C16H19111.0°110.3°
N1C16H20111.0°110.3°
C16C7N2104.0°111.1°
C16C7H10109.9°110.8°
C7C16H19110.9°110.3°
C7C16H20110.9°110.1°
C7N2C8121.4°120.0°
N2C7H10110.6°110.9°
C7N2H11119.3°120.0°
O2C8N2123.2°120.1°
O2C8O1123.6°120.0°
C15C10C11117.2°120.0°
C15C10C9124.0°120.0°
C10C15H18120.2°120.0°
C12C11C10122.3°119.9°
C12C11H14118.9°120.0°
C11C12H15120.3°120.0°
C3C2C29108.6°109.5°
C3C2C1108.4°109.4°
C3C2H4109.7°109.4°
C2C3H5108.7°109.5°
C2C3H6108.8°109.5°
N2C8O1113.2°120.0°
C8N2H11119.3°120.1°
C8O1C9116.3°117.0°
C11C10C9118.7°120.0°
C10C11H14118.8°120.0°
C10C9O1115.1°109.5°
C10C9H12108.1°109.5°
C10C9H13108.0°109.5°
C29C2C1111.1°109.5°
C29C2H4109.6°109.5°
C2C29H39109.5°109.4°
C2C29H40109.5°109.5°
C2C29H41109.5°109.4°
C2C1H1109.5°109.5°
C2C1H2109.5°109.5°
C2C1H3109.5°109.4°
C1C2H4109.5°109.5°
O1C9H12108.1°109.5°
O1C9H13108.1°109.5°
H1C1H2109.5°109.5°
H1C1H3109.4°109.4°
H2C1H3109.5°109.5°
H5C3H6109.5°109.4°
H8C6H9109.5°110.5°
H12C9H13109.5°109.4°
H19C16H20109.5°110.3°
H27C22H28109.5°115.6°
H29C23H30109.5°115.5°
H31C24H32109.5°109.5°
H34C26H35109.5°110.9°
H36C27H37109.5°110.1°
H39C29H40109.4°109.5°
H39C29H41109.4°109.5°
H40C29H41109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C27N5C28H38180.0°179.9°
N5C27C26H36119.2°119.0°
N5C27C26H37119.2°119.1°
C27N5C28O6176.7°179.6°
C27N5C28C251.4°0.6°
N5C27C26C2514.0°25.4°
N5C27C26H34133.7°92.7°
N5C27C26H35105.8°143.5°
N5C27H36H37122.3°121.9°
C28N5C27C267.8°17.1°
N5C28O6C25174.5°179.8°
N5C28C25C2610.3°16.1°
N5C28C25C24132.6°134.8°
N5C28C25H33109.6°102.6°
C28N5C27H36111.4°136.2°
C28N5C27H37127.0°102.0°
C27C26C25C2815.4°24.7°
C27C26C25H34119.7°118.1°
C27C26C25H35119.7°118.2°
C27C26C25C24133.0°143.4°
C27C26C25H33104.7°94.0°
C27C26H34H35120.8°123.9°
C26C27H36H37122.2°122.0°
C26C27N5H38172.2°163.0°
C21C23C22H29109.3°107.5°
C21C23C22H30109.3°107.5°
C23C21C22N4106.4°107.5°
C23C21C22H26106.7°107.5°
C23C21N4H26145.2°145.8°
C23C21N4C20100.7°136.4°
C23C21N4H2579.3°43.6°
C21C23C22H27109.6°107.4°
C21C23C22H28109.6°107.5°
C21C23H29H30145.2°145.7°
C23C22H27H28144.4°145.8°
C22C23H29H30145.1°145.6°
O5C20N4C214.9°0.0°
O5C20N4C19179.9°180.0°
O5C20C19C1872.4°115.0°
O5C20C19O4175.8°5.0°
O5C20C19H2353.7°125.0°
O5C20N4H25175.1°180.0°
O6C28C25C26174.3°163.8°
O6C28C25C2452.0°45.0°
O6C28C25H3365.8°77.5°
O6C28N5H383.3°0.3°
C28C25C26C24117.6°118.7°
C28C25C26H33120.1°118.7°
C28C25C24H33118.4°122.5°
C28C25C24C18174.9°70.7°
C28C25C24H3165.1°49.3°
C28C25C24H3254.9°169.3°
C28C25C26H34135.1°93.4°
C28C25C26H35104.3°142.9°
C25C28N5H38178.6°179.5°
C26C25C24H33122.7°122.6°
C26C25C24C1866.2°174.4°
C26C25C24H3153.8°65.6°
C26C25C24H32173.8°54.4°
C25C26H34H35120.8°123.7°
C25C26C27H36105.3°144.4°
C25C26C27H37133.2°93.7°
C22C21N4H26146.7°145.6°
C22C21N4C20168.9°155.0°
C22C21N4H2511.1°25.0°
C21C22H27H28144.5°145.7°
C21N4C20H25180.0°180.0°
C21N4C20C19175.0°180.0°
N4C21C22H273.2°145.0°
N4C21C22H28144.0°0.0°
N4C21C23H292.2°0.1°
N4C21C23H30143.7°145.0°
C25C24C18H31120.0°120.1°
C25C24C18H32120.0°120.0°
C25C24C18C19179.5°64.9°
C25C24C18N365.6°175.1°
C25C24C18H2258.9°55.1°
C25C24H31H32120.0°120.0°
C24C25C26H34107.3°25.3°
C24C25C26H3513.3°98.4°
N4C20C19C18107.7°65.0°
N4C20C19O44.2°175.0°
N4C20C19H23126.2°55.0°
C20N4C21H2644.5°9.4°
C20C19C18C2479.5°179.9°
C20C19C18O4109.6°120.1°
C20C19C18H23126.0°120.0°
C20C19C18N3161.0°60.0°
C20C19O4H23120.6°120.0°
C20C19C18H2242.3°59.9°
C20C19O4H24180.0°60.0°
C19C20N4H255.0°0.0°
C24C18C19N3119.5°120.0°
C24C18C19H22121.9°120.0°
C24C18N3H22124.1°120.0°
C24C18C19O4170.9°60.0°
C24C18N3C17123.3°87.6°
C24C18N3H2156.7°92.5°
C24C18C19H2346.5°60.0°
C18C24H31H32120.0°120.0°
C18C24C25H3356.5°51.8°
C19C18N3H22117.8°120.0°
C18C19O4H23123.1°120.0°
C19C18N3C17118.6°152.4°
C19C18N3H2161.4°27.5°
C18C19O4H2463.6°60.0°
C19C18C24H3160.5°175.0°
C19C18C24H3259.5°55.1°
N3C18C19O451.4°60.0°
C18N3C17O77.4°5.1°
C18N3C17H21180.0°179.9°
C18N3C17C4174.6°175.0°
N3C18C19H2373.0°180.0°
N3C18C24H31174.4°55.0°
N3C18C24H3254.4°65.0°
O4C19C18H2267.3°180.0°
O7C17N3C4177.9°180.0°
O7C17C4N152.4°0.0°
O7C17C4C369.4°120.0°
O7C17C4H7172.1°120.0°
O7C17N3H21172.5°174.8°
N3C17C4N1125.4°180.0°
N3C17C4C3112.7°60.0°
N3C17C4H75.8°60.0°
C17N3C18H220.9°32.3°
O3C5C6N1177.5°179.9°
O3C5C6C7163.6°163.8°
O3C5N1C41.9°0.5°
O3C5N1C16176.9°179.8°
O3C5C6H877.8°77.5°
O3C5C6H944.9°45.1°
C17C4N1C559.0°61.5°
C17C4N1C3118.9°120.0°
C17C4N1H7119.1°120.0°
C17C4C3H7118.6°120.0°
C17C4N1C16119.6°118.8°
C17C4C3C2157.5°175.3°
C17C4C3H582.1°55.3°
C17C4C3H637.0°64.6°
C4C17N3H215.4°5.1°
C5C6C7H8118.7°118.6°
C5C6C7H9118.6°118.7°
C6C5N1C4179.7°179.6°
C6C5N1C160.8°0.1°
C5C6C7C1622.4°24.6°
C5C6C7N2137.8°142.9°
C5C6H8H9123.8°122.6°
C5C6C7H1098.7°93.3°
N1C5C6C714.0°16.3°
C5N1C4C16178.6°179.7°
C5N1C4C3177.8°58.5°
C5N1C16C712.9°16.6°
C5N1C4H760.1°178.5°
N1C5C6H8104.7°102.4°
N1C5C6H9132.6°135.0°
C5N1C16H19131.9°135.7°
C5N1C16H20106.2°102.2°
C6C7C16N122.4°25.1°
C6C7C16N2120.5°118.2°
C6C7C16H10121.1°118.1°
C6C7N2H10123.0°123.8°
C6C7N2C8105.1°86.4°
C7C6H8H9123.9°122.7°
C6C7N2H1174.9°93.5°
C6C7C16H19141.5°144.2°
C6C7C16H2096.6°93.9°
C13C14C15H17180.0°179.6°
C14C13C12H16180.0°179.9°
C13C14C15C102.3°0.7°
C14C13C12C110.5°0.1°
C14C13C12H15179.5°180.0°
C13C14C15H18177.7°180.0°
C15C14C13C121.7°0.4°
C14C15C10H18180.0°179.4°
C14C15C10C111.7°0.7°
C14C15C10C9178.5°179.7°
C15C14C13H16178.3°179.7°
C13C12C11H15180.0°180.0°
C13C12C11C100.0°0.0°
C13C12C11H14180.0°180.0°
C12C13C14H17178.3°180.0°
N1C4C3H7122.6°120.0°
C4N1C16C7165.8°163.1°
N1C4C3C283.7°64.7°
N1C4C3H536.7°175.3°
N1C4C3H6155.8°55.4°
C4N1C16H1946.8°44.0°
C4N1C16H2075.2°78.0°
C3C4N1C160.8°121.2°
C4C3C2H5120.4°120.0°
C4C3C2H6120.4°120.0°
C4C3C2C2961.7°173.3°
C4C3C2C1177.5°66.6°
C4C3C2H458.0°53.3°
C4C3H5H6118.7°120.0°
N1C16C7H19119.1°119.1°
N1C16C7H20119.1°119.0°
N1C16C7N2143.0°143.3°
C16N1C4H7121.3°1.2°
N1C16C7H1098.6°93.0°
N1C16H19H20122.8°122.1°
C16C7N2H10117.9°123.7°
C16C7N2C8135.8°161.0°
C16C7C6H896.3°94.0°
C16C7C6H9141.0°143.3°
C16C7N2H1144.2°19.0°
C7C16H19H20122.7°121.8°
C7N2C8O29.2°0.0°
C7N2C8H11180.0°180.0°
C7N2C8O1173.6°180.0°
N2C7C6H819.1°24.3°
N2C7C6H9103.6°98.4°
N2C7C16H1998.0°97.6°
N2C7C16H2023.9°24.3°
O2C8N2O1177.2°180.0°
O2C8O1C93.8°0.0°
O2C8N2H11170.8°180.0°
C15C10C11C120.6°0.4°
C15C10C11C9179.8°179.7°
C15C10C9O19.6°90.3°
C15C10C9H12130.4°149.7°
C15C10C9H13111.2°29.7°
C15C10C11H14179.4°179.7°
C10C15C14H17177.7°179.7°
C12C11C10H14180.0°179.9°
C12C11C10C9179.6°180.0°
C11C12C13H16179.5°180.0°
C3C2C29C1119.1°120.0°
C3C2C29H4119.8°120.0°
C3C2C1H4119.6°119.9°
C3C2C1H1180.0°60.1°
C3C2C1H260.0°60.0°
C3C2C1H360.0°180.0°
C2C3H5H6118.7°120.0°
C2C3C4H738.9°55.3°
C3C2C29H39180.0°55.1°
C3C2C29H4060.0°175.1°
C3C2C29H4160.0°64.9°
N2C8O1C9179.1°180.0°
C8N2C7H1017.9°37.4°
C8O1C9C1077.8°180.0°
O1C8N2H116.4°0.0°
C8O1C9H12161.4°60.0°
C8O1C9H1343.0°60.0°
C11C10C9O1170.2°90.0°
C11C10C9H1249.4°30.0°
C11C10C9H1368.9°150.0°
C10C11C12H15180.0°180.0°
C11C10C15H18178.4°180.0°
C10C9O1H12120.8°120.0°
C10C9O1H13120.8°120.0°
C10C9H12H13117.4°120.0°
C9C10C11H140.4°0.0°
C9C10C15H181.5°0.3°
C29C2C1H4121.2°120.0°
C29C2C1H160.8°60.0°
C29C2C1H2179.2°180.0°
C29C2C1H359.2°60.0°
C29C2C3H5177.9°66.6°
C29C2C3H658.7°53.3°
C2C29H39H40120.0°120.0°
C2C29H39H41120.0°120.0°
C2C29H40H41120.0°120.0°
C2C1H1H2120.0°120.1°
C2C1H1H3120.0°119.9°
C2C1H2H3120.0°120.0°
C1C2C3H557.1°53.4°
C1C2C3H662.1°173.3°
C1C2C29H3960.9°64.9°
C1C2C29H4059.1°55.1°
C1C2C29H41179.1°175.1°
O1C9H12H13117.5°120.0°
H1C1H2H3120.0°120.0°
H1C1C2H460.4°180.0°
H2C1C2H459.6°59.9°
H3C1C2H4179.6°60.1°
H4C2C3H562.4°173.4°
H4C2C3H6178.4°66.7°
H4C2C29H3960.2°175.1°
H4C2C29H40179.8°64.9°
H4C2C29H4159.7°55.1°
H5C3C4H7159.3°64.8°
H6C3C4H781.5°175.3°
H8C6C7H10142.6°148.0°
H9C6C7H1019.9°25.4°
H10C7N2H11162.1°142.7°
H10C7C16H1920.4°26.1°
H10C7C16H20142.3°148.0°
H14C11C12H150.0°0.0°
H15C12C13H160.5°0.1°
H16C13C14H171.7°0.1°
H17C14C15H182.3°0.3°
H21N3C18H22179.2°147.6°
H22C18C19H23168.4°60.0°
H22C18C24H3161.1°64.9°
H22C18C24H32179.0°175.1°
H23C19O4H2459.5°180.0°
H25N4C21H26135.5°170.6°
H26C21C22H27143.7°0.0°
H26C21C22H282.9°145.0°
H26C21C23H29143.4°145.0°
H26C21C23H301.9°0.1°
H27C22C23H290.4°145.1°
H27C22C23H30141.1°0.1°
H28C22C23H29141.1°0.1°
H28C22C23H300.4°145.0°
H31C24C25H33176.5°171.8°
H32C24C25H3363.5°68.2°
H33C25C26H3415.0°147.9°
H33C25C26H35135.6°24.2°
H34C26C27H3614.5°26.3°
H34C26C27H37107.1°148.2°
H35C26C27H36135.0°97.5°
H35C26C27H3713.5°24.4°
H36C27N5H3868.5°43.9°
H37C27N5H3853.0°77.9°
H39C29H40H41120.0°120.1°

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon