U53
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O2 | C12 | doub | 1.22Å | 1.22Å | |
S | C7 | sing | 1.81Å | 1.78Å | |
S | C6 | sing | 1.76Å | 1.71Å | |
C13 | C14 | sing | 1.53Å | 1.50Å | |
C13 | O1 | sing | 1.45Å | 1.44Å | |
C7 | C8 | sing | 1.53Å | 1.52Å | |
C12 | O1 | sing | 1.35Å | 1.43Å | |
C12 | C10 | sing | 1.47Å | 1.48Å | |
C | O | sing | 1.43Å | 1.45Å | |
C6 | C10 | doub | 1.40Å | 1.45Å | Aromatic |
C6 | C5 | sing | 1.42Å | 1.46Å | Aromatic |
N | C9 | trip | 1.14Å | 1.16Å | |
C10 | C11 | sing | 1.40Å | 1.38Å | Aromatic |
C15 | C5 | doub | 1.40Å | 1.37Å | Aromatic |
C15 | C1 | sing | 1.38Å | 1.37Å | Aromatic |
C9 | C8 | sing | 1.47Å | 1.44Å | |
C5 | C4 | sing | 1.41Å | 1.46Å | Aromatic |
O | C1 | sing | 1.36Å | 1.39Å | |
C1 | C2 | doub | 1.40Å | 1.41Å | Aromatic |
C11 | N1 | doub | 1.31Å | 1.33Å | Aromatic |
C4 | N1 | sing | 1.34Å | 1.34Å | Aromatic |
C4 | C3 | doub | 1.40Å | 1.39Å | Aromatic |
C2 | C3 | sing | 1.36Å | 1.38Å | Aromatic |
C13 | H1 | sing | 1.09Å | 1.10Å | |
C13 | H2 | sing | 1.09Å | 1.10Å | |
C14 | H3 | sing | 1.09Å | 1.10Å | |
C14 | H4 | sing | 1.09Å | 1.10Å | |
C14 | H5 | sing | 1.09Å | 1.10Å | |
C11 | H6 | sing | 1.08Å | 1.08Å | |
C3 | H7 | sing | 1.08Å | 1.08Å | |
C2 | H8 | sing | 1.08Å | 1.08Å | |
C7 | H9 | sing | 1.09Å | 1.10Å | |
C7 | H10 | sing | 1.09Å | 1.10Å | |
C8 | H11 | sing | 1.09Å | 1.10Å | |
C8 | H12 | sing | 1.09Å | 1.10Å | |
C15 | H13 | sing | 1.08Å | 1.08Å | |
C | H14 | sing | 1.09Å | 1.10Å | |
C | H15 | sing | 1.09Å | 1.10Å | |
C | H16 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O2 | C12 | O1 | 116.4° | 120.0° |
O2 | C12 | C10 | 115.2° | 120.1° |
C7 | S | C6 | 111.4° | 100.0° |
S | C7 | C8 | 105.8° | 109.5° |
S | C7 | H9 | 110.4° | 109.5° |
S | C7 | H10 | 110.4° | 109.5° |
S | C6 | C10 | 123.5° | 121.1° |
S | C6 | C5 | 121.4° | 121.1° |
C14 | C13 | O1 | 110.0° | 109.5° |
C14 | C13 | H1 | 109.3° | 109.5° |
C14 | C13 | H2 | 109.3° | 109.5° |
C13 | C14 | H3 | 109.5° | 109.5° |
C13 | C14 | H4 | 109.5° | 109.5° |
C13 | C14 | H5 | 109.5° | 109.5° |
C13 | O1 | C12 | 116.3° | 117.0° |
O1 | C13 | H1 | 109.3° | 109.5° |
O1 | C13 | H2 | 109.4° | 109.4° |
C7 | C8 | C9 | 110.1° | 109.5° |
C8 | C7 | H9 | 110.4° | 109.4° |
C8 | C7 | H10 | 110.4° | 109.5° |
C7 | C8 | H11 | 109.3° | 109.4° |
C7 | C8 | H12 | 109.3° | 109.5° |
O1 | C12 | C10 | 127.2° | 120.0° |
C12 | C10 | C6 | 119.5° | 120.3° |
C12 | C10 | C11 | 119.4° | 120.4° |
C | O | C1 | 119.4° | 117.0° |
O | C | H14 | 109.5° | 109.4° |
O | C | H15 | 109.5° | 109.4° |
O | C | H16 | 109.5° | 109.5° |
C10 | C6 | C5 | 115.0° | 117.7° |
C6 | C10 | C11 | 120.5° | 119.3° |
C6 | C5 | C15 | 118.2° | 121.1° |
C6 | C5 | C4 | 119.8° | 119.1° |
N | C9 | C8 | 175.0° | 180.0° |
C10 | C11 | N1 | 123.3° | 121.6° |
C10 | C11 | H6 | 118.3° | 119.2° |
C5 | C15 | C1 | 117.4° | 119.5° |
C15 | C5 | C4 | 122.0° | 119.8° |
C5 | C15 | H13 | 121.3° | 120.2° |
C15 | C1 | O | 116.3° | 119.7° |
C15 | C1 | C2 | 120.9° | 120.5° |
C1 | C15 | H13 | 121.3° | 120.3° |
C9 | C8 | H11 | 109.3° | 109.5° |
C9 | C8 | H12 | 109.3° | 109.5° |
C5 | C4 | N1 | 119.5° | 120.2° |
C5 | C4 | C3 | 120.0° | 119.2° |
O | C1 | C2 | 122.8° | 119.8° |
C1 | C2 | C3 | 124.4° | 120.9° |
C1 | C2 | H8 | 117.8° | 119.5° |
C11 | N1 | C4 | 121.6° | 122.1° |
N1 | C11 | H6 | 118.4° | 119.1° |
N1 | C4 | C3 | 120.4° | 120.6° |
C4 | C3 | C2 | 115.3° | 120.1° |
C4 | C3 | H7 | 122.3° | 120.0° |
C2 | C3 | H7 | 122.4° | 119.9° |
C3 | C2 | H8 | 117.8° | 119.6° |
H1 | C13 | H2 | 109.5° | 109.5° |
H3 | C14 | H4 | 109.4° | 109.4° |
H3 | C14 | H5 | 109.5° | 109.5° |
H4 | C14 | H5 | 109.5° | 109.5° |
H9 | C7 | H10 | 109.5° | 109.5° |
H11 | C8 | H12 | 109.5° | 109.5° |
H14 | C | H15 | 109.4° | 109.5° |
H14 | C | H16 | 109.4° | 109.4° |
H15 | C | H16 | 109.5° | 109.6° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O2 | C12 | O1 | C13 | 13.0° | 0.0° |
O2 | C12 | O1 | C10 | 167.1° | 179.7° |
O2 | C12 | C10 | C6 | 43.7° | 0.3° |
O2 | C12 | C10 | C11 | 127.7° | 180.0° |
S | C7 | C8 | H9 | 119.4° | 120.0° |
S | C7 | C8 | H10 | 119.4° | 120.0° |
C7 | S | C6 | C10 | 120.2° | 90.0° |
C7 | S | C6 | C5 | 55.2° | 89.7° |
S | C7 | C8 | C9 | 64.6° | 180.0° |
S | C7 | H9 | H10 | 121.7° | 120.1° |
S | C7 | C8 | H11 | 175.3° | 60.0° |
S | C7 | C8 | H12 | 55.5° | 60.0° |
C6 | S | C7 | C8 | 45.5° | 180.0° |
S | C6 | C10 | C12 | 10.0° | 0.0° |
S | C6 | C10 | C5 | 175.7° | 179.7° |
S | C6 | C10 | C11 | 178.7° | 179.7° |
S | C6 | C5 | C15 | 2.7° | 0.3° |
S | C6 | C5 | C4 | 176.2° | 179.8° |
C6 | S | C7 | H9 | 164.9° | 60.1° |
C6 | S | C7 | H10 | 74.0° | 60.0° |
C14 | C13 | O1 | H1 | 120.1° | 120.0° |
C14 | C13 | O1 | H2 | 120.1° | 120.0° |
C14 | C13 | O1 | C12 | 88.3° | 180.0° |
C14 | C13 | H1 | H2 | 119.7° | 120.0° |
C13 | C14 | H3 | H4 | 120.0° | 120.0° |
C13 | C14 | H3 | H5 | 120.0° | 120.1° |
C13 | C14 | H4 | H5 | 120.0° | 120.0° |
C13 | O1 | C12 | C10 | 154.1° | 179.7° |
O1 | C13 | H1 | H2 | 119.8° | 120.0° |
O1 | C13 | C14 | H3 | 180.0° | 59.9° |
O1 | C13 | C14 | H4 | 60.0° | 60.0° |
O1 | C13 | C14 | H5 | 60.0° | 180.0° |
C7 | C8 | C9 | N | 39.0° | 48.6° |
C7 | C8 | C9 | H11 | 120.1° | 119.9° |
C7 | C8 | C9 | H12 | 120.1° | 120.0° |
C8 | C7 | H9 | H10 | 121.7° | 120.0° |
C7 | C8 | H11 | H12 | 119.7° | 120.0° |
O1 | C12 | C10 | C6 | 149.0° | 179.4° |
O1 | C12 | C10 | C11 | 39.6° | 0.3° |
C12 | O1 | C13 | H1 | 151.7° | 60.0° |
C12 | O1 | C13 | H2 | 31.8° | 60.0° |
C12 | C10 | C6 | C11 | 171.3° | 179.7° |
C12 | C10 | C6 | C5 | 174.4° | 179.8° |
C12 | C10 | C11 | N1 | 177.6° | 180.0° |
C12 | C10 | C11 | H6 | 2.4° | 0.0° |
C | O | C1 | C15 | 1.8° | 180.0° |
C | O | C1 | C2 | 179.3° | 0.5° |
O | C | H14 | H15 | 120.0° | 119.9° |
O | C | H14 | H16 | 120.0° | 119.9° |
O | C | H15 | H16 | 120.0° | 120.0° |
C10 | C6 | C5 | C15 | 178.4° | 180.0° |
C10 | C6 | C5 | C4 | 0.4° | 0.5° |
C6 | C10 | C11 | N1 | 6.2° | 0.3° |
C6 | C10 | C11 | H6 | 173.8° | 179.7° |
C5 | C6 | C10 | C11 | 3.0° | 0.5° |
C6 | C5 | C15 | C4 | 178.8° | 179.5° |
C6 | C5 | C15 | C1 | 179.0° | 180.0° |
C6 | C5 | C4 | N1 | 0.6° | 0.2° |
C6 | C5 | C4 | C3 | 179.3° | 179.7° |
C6 | C5 | C15 | H13 | 1.0° | 0.1° |
N | C9 | C8 | H11 | 159.1° | 71.4° |
N | C9 | C8 | H12 | 81.1° | 168.6° |
C10 | C11 | N1 | H6 | 180.0° | 180.0° |
C10 | C11 | N1 | C4 | 6.5° | 0.0° |
C5 | C15 | C1 | H13 | 180.0° | 179.9° |
C5 | C15 | C1 | O | 179.4° | 180.0° |
C5 | C15 | C1 | C2 | 0.4° | 0.5° |
C15 | C5 | C4 | N1 | 178.2° | 179.7° |
C15 | C5 | C4 | C3 | 0.5° | 0.2° |
C1 | C15 | C5 | C4 | 0.2° | 0.5° |
C15 | C1 | O | C2 | 179.0° | 179.5° |
C15 | C1 | C2 | C3 | 1.0° | 0.3° |
C15 | C1 | C2 | H8 | 179.0° | 179.7° |
C9 | C8 | C7 | H9 | 54.8° | 60.0° |
C9 | C8 | C7 | H10 | 176.0° | 60.0° |
C9 | C8 | H11 | H12 | 119.7° | 120.0° |
C5 | C4 | N1 | C11 | 3.5° | 0.0° |
C5 | C4 | N1 | C3 | 178.7° | 179.9° |
C5 | C4 | C3 | C2 | 0.9° | 0.0° |
C5 | C4 | C3 | H7 | 179.1° | 180.0° |
C4 | C5 | C15 | H13 | 179.8° | 179.6° |
O | C1 | C2 | C3 | 179.9° | 179.8° |
O | C1 | C2 | H8 | 0.1° | 0.3° |
O | C1 | C15 | H13 | 0.6° | 0.1° |
C1 | O | C | H14 | 180.0° | 60.0° |
C1 | O | C | H15 | 60.0° | 180.0° |
C1 | O | C | H16 | 60.0° | 59.9° |
C1 | C2 | C3 | C4 | 1.2° | 0.0° |
C1 | C2 | C3 | H8 | 180.0° | 180.0° |
C1 | C2 | C3 | H7 | 178.8° | 180.0° |
C2 | C1 | C15 | H13 | 179.6° | 179.6° |
C11 | N1 | C4 | C3 | 177.8° | 180.0° |
N1 | C4 | C3 | C2 | 177.7° | 179.9° |
C4 | N1 | C11 | H6 | 173.5° | 180.0° |
N1 | C4 | C3 | H7 | 2.2° | 0.0° |
C4 | C3 | C2 | H7 | 180.0° | 180.0° |
C4 | C3 | C2 | H8 | 178.8° | 180.0° |
H1 | C13 | C14 | H3 | 59.9° | 180.0° |
H1 | C13 | C14 | H4 | 60.1° | 60.0° |
H1 | C13 | C14 | H5 | 179.9° | 60.0° |
H2 | C13 | C14 | H3 | 59.9° | 60.1° |
H2 | C13 | C14 | H4 | 179.9° | 180.0° |
H2 | C13 | C14 | H5 | 60.1° | 60.0° |
H3 | C14 | H4 | H5 | 120.0° | 120.0° |
H7 | C3 | C2 | H8 | 1.2° | 0.0° |
H9 | C7 | C8 | H11 | 65.2° | 180.0° |
H9 | C7 | C8 | H12 | 175.0° | 60.0° |
H10 | C7 | C8 | H11 | 55.9° | 60.0° |
H10 | C7 | C8 | H12 | 63.9° | 180.0° |
H14 | C | H15 | H16 | 119.9° | 120.0° |