U3H

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N1	C6	sing	1.38Å	1.38Å
N1	C2	sing	1.46Å	1.63Å
N1	C1'	sing	1.44Å	1.53Å
C6	C5	doub	1.34Å	1.35Å
C6	H6	sing	1.08Å	1.10Å
C2	O2	sing	1.42Å	1.23Å
C2	N3	sing	1.46Å	1.39Å
C2	H2'	sing	1.09Å	1.12Å
N3	C4	sing	1.38Å	1.40Å
N3	H3	sing	1.02Å	1.02Å
C4	O4	doub	1.23Å	1.23Å
C4	C5	sing	1.48Å	1.45Å
C5	H5	sing	1.08Å	1.10Å
C1'	C2'	sing	1.52Å	1.54Å
C1'	O4'	sing	1.43Å	1.46Å
C1'	H1'	sing	1.10Å	1.12Å
C2'	O2'	sing	1.41Å	1.42Å
C2'	C3'	sing	1.51Å	1.50Å
C2'	H2''	sing	1.10Å	1.11Å
O2'	HA	sing	0.97Å	0.95Å
C3'	C4'	sing	1.52Å	1.51Å
C3'	H3'	sing	1.10Å	1.12Å
C3'	H3'2	sing	1.10Å	1.11Å
C4'	O4'	sing	1.44Å	1.44Å
C4'	C5'	sing	1.52Å	1.54Å
C4'	H4'	sing	1.09Å	1.12Å
C5'	O5'	sing	1.42Å	1.42Å
C5'	H5'1	sing	1.09Å	1.12Å
C5'	H5'2	sing	1.09Å	1.11Å
O5'	PA	sing	1.62Å	1.66Å
PA	O1A	doub	1.50Å	1.57Å
PA	O2A	sing	1.62Å	1.55Å
PA	O3A	sing	1.62Å	1.70Å
O3A	PB	sing	1.61Å	1.66Å
PB	O1B	doub	1.50Å	1.58Å
PB	O2B	sing	1.62Å	1.57Å
PB	O3B	sing	1.62Å	1.69Å
O3B	PG	sing	1.62Å	1.65Å
PG	O1G	doub	1.50Å	1.57Å
PG	O2G	sing	1.62Å	1.60Å
PG	O3G	sing	1.62Å	1.59Å
HO1	O2B	sing	0.98Å	0.95Å
HO2	O3G	sing	0.98Å	0.95Å
HO3	O2G	sing	0.98Å	0.95Å
HO4	O2A	sing	0.98Å	0.95Å
HO5	O2	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C6	N1	C2	109.2°	118.9°
C6	N1	C1'	134.0°	122.5°
N1	C6	C5	131.6°	125.3°
N1	C6	H6	115.3°	113.8°
C2	N1	C1'	116.8°	117.5°
N1	C2	O2	120.9°	111.1°
N1	C2	N3	117.4°	111.9°
N1	C2	H2'	129.8°	110.7°
N1	C1'	C2'	115.9°	112.6°
N1	C1'	O4'	115.2°	109.0°
N1	C1'	H1'	99.2°	108.8°
C5	C6	H6	113.1°	120.8°
C6	C5	C4	119.6°	118.5°
C6	C5	H5	116.9°	122.3°
O2	C2	N3	121.7°	108.1°
O2	C2	H2'	15.0°	108.1°
C2	O2	HO5	109.5°	106.7°
N3	C2	H2'	111.5°	106.9°
C2	N3	C4	126.8°	125.1°
C2	N3	H3	116.4°	117.4°
C4	N3	H3	116.8°	117.4°
N3	C4	O4	119.2°	123.9°
N3	C4	C5	115.4°	116.0°
O4	C4	C5	125.4°	120.1°
C4	C5	H5	123.6°	119.1°
C2'	C1'	O4'	105.7°	107.1°
C2'	C1'	H1'	110.0°	111.4°
C1'	C2'	O2'	109.6°	111.3°
C1'	C2'	C3'	107.7°	102.0°
C1'	C2'	H2''	111.9°	111.9°
O4'	C1'	H1'	110.7°	107.8°
C1'	O4'	C4'	109.4°	109.0°
O2'	C2'	C3'	113.3°	112.0°
O2'	C2'	H2''	106.1°	108.8°
C2'	O2'	HA	109.7°	106.6°
C3'	C2'	H2''	108.2°	110.7°
C2'	C3'	C4'	103.6°	102.7°
C2'	C3'	H3'	114.4°	109.8°
C2'	C3'	H3'2	114.5°	113.2°
C4'	C3'	H3'	114.4°	110.3°
C4'	C3'	H3'2	114.5°	113.9°
C3'	C4'	O4'	110.2°	106.2°
C3'	C4'	C5'	109.2°	113.2°
C3'	C4'	H4'	115.3°	111.3°
H3'	C3'	H3'2	96.0°	107.0°
O4'	C4'	C5'	122.4°	108.5°
O4'	C4'	H4'	99.0°	108.6°
C5'	C4'	H4'	100.3°	108.9°
C4'	C5'	O5'	119.6°	109.0°
C4'	C5'	H5'1	108.5°	110.5°
C4'	C5'	H5'2	108.6°	110.5°
O5'	C5'	H5'1	108.6°	108.8°
O5'	C5'	H5'2	108.6°	108.8°
C5'	O5'	PA	117.8°	119.9°
H5'1	C5'	H5'2	101.4°	109.1°
O5'	PA	O1A	109.2°	114.8°
O5'	PA	O2A	106.9°	104.4°
O5'	PA	O3A	100.9°	104.6°
O1A	PA	O2A	111.1°	114.4°
O1A	PA	O3A	112.8°	114.2°
O2A	PA	O3A	115.3°	103.2°
PA	O2A	HO4	109.5°	118.9°
PA	O3A	PB	122.8°	131.4°
O3A	PB	O1B	106.4°	115.7°
O3A	PB	O2B	111.1°	104.2°
O3A	PB	O3B	107.8°	101.6°
O1B	PB	O2B	109.2°	114.8°
O1B	PB	O3B	106.4°	115.0°
O2B	PB	O3B	115.5°	103.8°
PB	O2B	HO1	109.5°	119.0°
PB	O3B	PG	123.8°	131.8°
O3B	PG	O1G	124.4°	114.6°
O3B	PG	O2G	114.7°	103.1°
O3B	PG	O3G	85.9°	103.6°
O1G	PG	O2G	120.6°	115.2°
O1G	PG	O3G	87.1°	115.3°
O2G	PG	O3G	91.5°	103.5°
PG	O2G	HO3	109.5°	119.0°
PG	O3G	HO2	109.5°	119.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C6	N1	C2	C1'	179.1°	168.5°
N1	C6	C5	H6	180.0°	179.9°
C6	N1	C2	O2	179.8°	143.4°
C6	N1	C2	N3	0.7°	22.6°
C6	N1	C2	H2'	165.0°	96.5°
N1	C6	C5	C4	0.8°	2.9°
N1	C6	C5	H5	179.1°	179.8°
C6	N1	C1'	C2'	111.0°	56.0°
C6	N1	C1'	O4'	13.1°	62.6°
C6	N1	C1'	H1'	131.4°	180.0°
C2	N1	C6	C5	0.8°	11.6°
C2	N1	C6	H6	179.2°	168.5°
N1	C2	O2	N3	179.5°	123.1°
N1	C2	O2	H2'	130.4°	121.6°
N1	C2	N3	H2'	168.2°	121.4°
N1	C2	N3	C4	0.8°	22.7°
N1	C2	N3	H3	179.2°	157.4°
C2	N1	C1'	C2'	70.3°	135.9°
C2	N1	C1'	O4'	165.6°	105.4°
C2	N1	C1'	H1'	47.4°	11.9°
N1	C2	O2	HO5	30.7°	17.2°
C1'	N1	C6	C5	179.6°	179.5°
C1'	N1	C6	H6	0.4°	0.6°
C1'	N1	C2	O2	0.8°	48.0°
C1'	N1	C2	N3	179.8°	168.9°
C1'	N1	C2	H2'	14.1°	72.0°
N1	C1'	C2'	O4'	128.9°	119.8°
N1	C1'	C2'	H1'	111.5°	122.5°
N1	C1'	O4'	H1'	111.6°	117.9°
N1	C1'	C2'	O2'	123.1°	91.8°
N1	C1'	C2'	C3'	113.2°	148.6°
N1	C1'	C2'	H2''	5.6°	30.2°
N1	C1'	O4'	C4'	123.1°	132.1°
C6	C5	C4	N3	0.7°	4.0°
C6	C5	C4	O4	179.7°	174.5°
C6	C5	C4	H5	180.0°	177.1°
H6	C6	C5	C4	179.1°	177.1°
H6	C6	C5	H5	0.9°	0.1°
O2	C2	N3	H2'	12.3°	116.1°
O2	C2	N3	C4	179.7°	145.3°
O2	C2	N3	H3	0.3°	34.8°
C2	N3	C4	H3	180.0°	179.9°
C2	N3	C4	O4	179.6°	171.7°
C2	N3	C4	C5	0.8°	9.9°
N3	C2	O2	HO5	148.8°	105.8°
H2'	C2	N3	C4	167.4°	98.6°
H2'	C2	N3	H3	12.6°	81.3°
H2'	C2	O2	HO5	161.1°	138.9°
N3	C4	O4	C5	179.6°	178.3°
N3	C4	C5	H5	179.3°	179.0°
H3	N3	C4	O4	0.4°	8.2°
H3	N3	C4	C5	179.2°	170.2°
O4	C4	C5	H5	0.3°	2.6°
C2'	C1'	O4'	H1'	119.1°	120.0°
C1'	C2'	O2'	C3'	120.3°	113.4°
C1'	C2'	O2'	H2''	121.1°	123.8°
C1'	C2'	C3'	H2''	121.2°	119.3°
C1'	C2'	O2'	HA	180.0°	30.2°
C1'	C2'	C3'	C4'	18.5°	35.5°
C1'	C2'	C3'	H3'	143.8°	81.9°
C1'	C2'	C3'	H3'2	106.8°	158.6°
C2'	C1'	O4'	C4'	6.2°	10.0°
O4'	C1'	C2'	O2'	107.9°	148.4°
O4'	C1'	C2'	C3'	15.8°	28.8°
O4'	C1'	C2'	H2''	134.6°	89.6°
C1'	O4'	C4'	C3'	5.6°	13.1°
C1'	O4'	C4'	C5'	136.0°	108.8°
C1'	O4'	C4'	H4'	115.6°	132.9°
H1'	C1'	C2'	O2'	11.7°	30.7°
H1'	C1'	C2'	C3'	135.4°	88.9°
H1'	C1'	C2'	H2''	105.8°	152.7°
H1'	C1'	O4'	C4'	125.3°	110.0°
O2'	C2'	C3'	H2''	117.4°	121.7°
O2'	C2'	C3'	C4'	102.9°	154.5°
O2'	C2'	C3'	H3'	22.3°	37.2°
O2'	C2'	C3'	H3'2	131.8°	82.3°
C3'	C2'	O2'	HA	59.7°	83.3°
C2'	C3'	C4'	H3'	125.2°	117.0°
C2'	C3'	C4'	H3'2	125.3°	122.7°
C2'	C3'	H3'	H3'2	120.3°	123.2°
C2'	C3'	C4'	O4'	15.2°	30.8°
C2'	C3'	C4'	C5'	152.2°	88.1°
C2'	C3'	C4'	H4'	95.8°	148.8°
H2''	C2'	O2'	HA	58.9°	154.0°
H2''	C2'	C3'	C4'	139.7°	83.8°
H2''	C2'	C3'	H3'	95.0°	158.9°
H2''	C2'	C3'	H3'2	14.4°	39.4°
C4'	C3'	H3'	H3'2	120.3°	124.4°
C3'	C4'	O4'	C5'	130.3°	121.9°
C3'	C4'	O4'	H4'	121.3°	119.8°
C3'	C4'	C5'	H4'	121.5°	124.3°
C3'	C4'	C5'	O5'	130.0°	60.5°
C3'	C4'	C5'	H5'1	104.7°	180.0°
C3'	C4'	C5'	H5'2	4.7°	59.0°
H3'	C3'	C4'	O4'	140.4°	86.2°
H3'	C3'	C4'	C5'	82.5°	154.9°
H3'	C3'	C4'	H4'	29.4°	31.9°
H3'2	C3'	C4'	O4'	110.1°	153.5°
H3'2	C3'	C4'	C5'	26.9°	34.6°
H3'2	C3'	C4'	H4'	138.9°	88.4°
O4'	C4'	C5'	H4'	107.7°	118.1°
O4'	C4'	C5'	O5'	0.8°	178.1°
O4'	C4'	C5'	H5'1	124.5°	62.4°
O4'	C4'	C5'	H5'2	126.1°	58.5°
C4'	C5'	O5'	H5'1	125.2°	120.6°
C4'	C5'	O5'	H5'2	125.3°	120.6°
C4'	C5'	H5'1	H5'2	114.2°	121.7°
C4'	C5'	O5'	PA	147.9°	180.0°
H4'	C4'	C5'	O5'	108.5°	63.8°
H4'	C4'	C5'	H5'1	16.8°	55.7°
H4'	C4'	C5'	H5'2	126.2°	176.6°
O5'	C5'	H5'1	H5'2	114.3°	118.6°
C5'	O5'	PA	O1A	96.9°	180.0°
C5'	O5'	PA	O2A	142.9°	54.0°
C5'	O5'	PA	O3A	22.0°	54.1°
H5'1	C5'	O5'	PA	86.9°	59.4°
H5'2	C5'	O5'	PA	22.6°	59.4°
O5'	PA	O1A	O2A	117.6°	120.7°
O5'	PA	O1A	O3A	111.2°	120.8°
O5'	PA	O2A	O3A	111.2°	109.1°
O5'	PA	O3A	PB	116.3°	66.3°
O5'	PA	O2A	HO4	45.0°	80.0°
O1A	PA	O2A	O3A	129.8°	124.6°
O1A	PA	O3A	PB	0.0°	60.0°
O1A	PA	O2A	HO4	74.0°	46.3°
O2A	PA	O3A	PB	129.0°	175.2°
PA	O3A	PB	O1B	178.5°	60.0°
PA	O3A	PB	O2B	59.8°	67.0°
PA	O3A	PB	O3B	67.7°	174.7°
O3A	PA	O2A	HO4	156.1°	170.9°
O3A	PB	O1B	O2B	119.9°	121.5°
O3A	PB	O1B	O3B	114.8°	118.1°
O3A	PB	O2B	O3B	123.2°	106.0°
O3A	PB	O3B	PG	162.6°	65.7°
O3A	PB	O2B	HO1	151.7°	176.3°
O1B	PB	O2B	O3B	119.8°	126.4°
O1B	PB	O3B	PG	83.7°	60.0°
O1B	PB	O2B	HO1	34.8°	48.7°
O2B	PB	O3B	PG	37.7°	173.7°
PB	O3B	PG	O1G	7.0°	60.0°
PB	O3B	PG	O2G	179.7°	174.0°
PB	O3B	PG	O3G	90.6°	66.5°
O3B	PB	O2B	HO1	85.1°	77.7°
O3B	PG	O1G	O2G	172.9°	119.3°
O3B	PG	O1G	O3G	83.0°	120.2°
O3B	PG	O2G	O3G	86.1°	107.7°
O3B	PG	O3G	HO2	117.9°	174.4°
O3B	PG	O2G	HO3	9.6°	173.8°
O1G	PG	O2G	O3G	87.5°	126.7°
O1G	PG	O3G	HO2	6.9°	48.4°
O1G	PG	O2G	HO3	164.0°	48.3°
O2G	PG	O3G	HO2	127.5°	78.3°
O3G	PG	O2G	HO3	76.5°	78.5°

Definition date:	2002-10-29
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB
Derived from:	1N38