Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

TYN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCAsing1.47Å1.46Å
NHsing1.01Å1.02Å
NH2sing1.01Å1.02Å
CACBsing1.53Å1.53Å
CACsing1.51Å1.53Å
CAHAsing1.09Å1.12Å
CBCGsing1.51Å1.52Å
CBHB2sing1.09Å1.12Å
CBHB3sing1.09Å1.11Å
CGCD1doub1.38Å1.40ÅAromatic
CGCD2sing1.38Å1.40ÅAromatic
CD1CE1sing1.38Å1.40ÅAromatic
CD1HD1sing1.08Å1.10Å
CE1CZdoub1.39Å1.40ÅAromatic
CE1HE1sing1.08Å1.10Å
CD2CE2doub1.38Å1.40ÅAromatic
CD2HD2sing1.08Å1.10Å
CE2CZsing1.39Å1.39ÅAromatic
CE2HE2sing1.08Å1.10Å
CZOCsing1.36Å1.39Å
OCC5sing1.36Å1.38Å
COdoub1.21Å1.23Å
COXTsing1.34Å1.33Å
OXTHXTsing0.97Å0.95Å
O1N1sing1.47Å1.38Å
O1N2sing1.47Å1.38Å
N1C1sing1.41Å1.33Å
N1HN1sing1.01Å1.02Å
N2C6sing1.41Å1.31Å
N2HN2sing1.01Å1.02Å
N3C2sing1.40Å1.47Å
N3HN31sing0.97Å1.02Å
N3HN32sing0.97Å1.02Å
C1C2doub1.39Å1.44ÅAromatic
C1C6sing1.39Å1.43ÅAromatic
C2C3sing1.39Å1.35ÅAromatic
C3C4doub1.38Å1.44ÅAromatic
C3H3sing1.08Å1.10Å
C4C5sing1.39Å1.36ÅAromatic
C4H4sing1.08Å1.10Å
C5C6doub1.39Å1.43ÅAromatic
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CANH111.9°106.7°
CANH2111.2°106.7°
NCACB111.9°109.5°
NCAC106.4°109.5°
NCAHA110.1°109.4°
HNH2111.3°106.8°
CBCAC109.7°109.5°
CBCAHA106.7°109.5°
CACBCG113.2°109.5°
CACBHB2110.9°109.5°
CACBHB3110.9°109.5°
CCAHA112.2°109.5°
CACO120.7°120.0°
CACOXT116.0°120.0°
CGCBHB2110.8°109.5°
CGCBHB3110.8°109.5°
CBCGCD1121.9°119.9°
CBCGCD2120.1°120.0°
HB2CBHB399.5°109.4°
CD1CGCD2118.0°120.1°
CGCD1CE1121.0°120.0°
CGCD1HD1119.5°120.0°
CGCD2CE2121.5°120.1°
CGCD2HD2119.3°120.0°
CE1CD1HD1119.5°120.0°
CD1CE1CZ119.8°120.0°
CD1CE1HE1120.2°120.0°
CZCE1HE1120.0°120.1°
CE1CZCE2119.8°119.9°
CE1CZOC121.2°120.0°
CE2CD2HD2119.2°119.9°
CD2CE2CZ119.9°119.9°
CD2CE2HE2120.4°120.0°
CZCE2HE2119.7°120.1°
CE2CZOC119.0°120.0°
CZOCC5120.4°106.8°
OCC5C4116.9°119.9°
OCC5C6124.8°120.0°
OCOXT123.3°119.9°
COXTHXT116.0°120.1°
N1O1N2112.7°103.3°
O1N1C1104.4°105.4°
O1N1HN1114.1°106.8°
O1N2C6104.3°105.3°
O1N2HN2114.1°106.7°
C1N1HN1114.2°106.7°
N1C1C2133.0°131.2°
N1C1C6108.6°109.1°
C6N2HN2114.2°106.6°
N2C6C1109.9°109.1°
N2C6C5129.0°131.1°
C2N3HN31120.1°120.0°
C2N3HN32108.4°120.0°
N3C2C1120.1°120.0°
N3C2C3120.6°119.9°
HN31N3HN32108.4°120.0°
C2C1C6118.4°119.7°
C1C2C3119.3°120.1°
C1C6C5121.1°119.8°
C2C3C4121.6°120.1°
C2C3H3115.9°120.0°
C4C3H3122.5°119.9°
C3C4C5121.3°120.1°
C3C4H4122.4°120.0°
C5C4H4116.3°119.9°
C4C5C6118.3°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CANHH2125.2°113.8°
NCACBC117.8°120.0°
NCACBHA120.4°120.0°
NCACHA120.4°119.9°
NCACBCG178.4°60.0°
NCACBHB256.4°60.1°
NCACBHB353.1°180.0°
NCACO68.6°30.0°
NCACOXT110.6°150.0°
HNCACB180.0°53.8°
HNCAC60.2°173.8°
HNCAHA61.5°66.2°
H2NCACB54.8°60.0°
H2NCAC174.6°60.0°
H2NCAHA63.7°180.0°
CBCACHA118.4°120.0°
CACBCGHB2125.2°120.1°
CACBCGHB3125.3°120.0°
CACBHB2HB3116.8°120.0°
CACBCGCD136.8°90.0°
CACBCGCD2143.2°90.3°
CBCACO52.6°90.0°
CBCACOXT128.2°90.0°
CCACBCG60.5°180.0°
CCACBHB2174.2°60.0°
CCACBHB364.7°60.0°
CACOOXT179.2°180.0°
CACOXTHXT180.0°179.9°
HACACBCG61.2°60.0°
HACACBHB264.0°180.0°
HACACBHB3173.5°60.0°
HACACO170.9°150.0°
HACACOXT9.8°30.0°
CGCBHB2HB3116.7°119.9°
CBCGCD1CD2180.0°179.7°
CBCGCD1CE1179.6°180.0°
CBCGCD1HD10.4°0.0°
CBCGCD2CE2179.6°179.7°
CBCGCD2HD20.4°0.3°
HB2CBCGCD188.4°30.0°
HB2CBCGCD291.6°149.7°
HB3CBCGCD1162.0°150.0°
HB3CBCGCD218.0°29.8°
CGCD1CE1HD1180.0°180.0°
CGCD1CE1CZ0.4°0.0°
CGCD1CE1HE1179.6°180.0°
CD1CGCD2CE20.4°0.5°
CD1CGCD2HD2179.6°180.0°
CD2CGCD1CE10.4°0.3°
CD2CGCD1HD1179.6°179.8°
CGCD2CE2HD2180.0°179.5°
CGCD2CE2CZ0.4°0.5°
CGCD2CE2HE2179.6°179.7°
CD1CE1CZHE1180.0°179.9°
CD1CE1CZCE20.4°0.0°
CD1CE1CZOC179.4°180.0°
HD1CD1CE1CZ179.6°180.0°
HD1CD1CE1HE10.4°0.0°
CE1CZCE2CD20.4°0.3°
CE1CZCE2OC179.0°180.0°
CE1CZCE2HE2179.6°180.0°
CE1CZOCC517.3°94.8°
HE1CE1CZCE2179.6°179.9°
HE1CE1CZOC0.6°0.1°
CD2CE2CZHE2180.0°179.7°
CD2CE2CZOC179.4°179.7°
HD2CD2CE2CZ179.6°180.0°
HD2CD2CE2HE20.4°0.3°
CE2CZOCC5161.7°85.2°
HE2CE2CZOC0.6°0.0°
CZOCC5C466.5°5.6°
CZOCC5C6114.4°174.7°
OCC5C6N21.4°0.6°
OCC5C6C1179.6°179.7°
OCC5C4C3179.8°179.9°
OCC5C4C6179.2°179.7°
OCC5C4H40.2°0.0°
OCOXTHXT0.8°0.0°
O1N1C1HN1125.3°113.3°
N1O1N2C60.3°27.0°
N1O1N2HN2124.9°139.9°
O1N1C1C2179.3°162.8°
O1N1C1C61.0°16.9°
N2O1N1C10.5°26.7°
N2O1N1HN1124.9°140.0°
O1N2C6HN2125.2°113.1°
O1N2C6C11.0°17.6°
O1N2C6C5179.3°163.3°
N1C1C6N21.3°0.4°
N1C1C2N31.4°0.1°
N1C1C2C6178.1°179.7°
N1C1C2C3179.4°179.9°
N1C1C6C5179.8°179.7°
HN1N1C1C254.0°49.5°
HN1N1C1C6124.3°130.2°
N2C6C1C2179.9°179.8°
N2C6C1C5178.5°179.3°
N2C6C5C4179.5°179.6°
HN2N2C6C1124.2°130.7°
HN2N2C6C554.1°50.2°
C2N3HN31HN32125.3°179.9°
N3C2C1C3179.3°180.0°
N3C2C1C6179.5°179.7°
N3C2C3C4179.8°180.0°
N3C2C3H30.2°0.1°
HN31N3C2C1180.0°180.0°
HN31N3C2C30.8°0.0°
HN32N3C2C154.7°0.1°
HN32N3C2C3126.1°180.0°
C1C2C3C40.6°0.1°
C1C2C3H3179.4°180.0°
C2C1C6C51.7°0.6°
C6C1C2C31.3°0.3°
C1C6C5C41.3°0.5°
C2C3C4H3180.0°179.9°
C2C3C4C50.2°0.1°
C2C3C4H4179.7°180.0°
C3C4C5H4180.0°179.9°
C3C4C5C60.6°0.2°
H3C3C4C5179.7°180.0°
H3C3C4H40.3°0.1°
H4C4C5C6179.4°179.7°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon