TYC
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.44Å | |
N | H0 | sing | 1.01Å | 0.86Å | |
N | H | sing | 1.01Å | 1.02Å | |
CA | C | sing | 1.51Å | 1.54Å | |
CA | CB | sing | 1.53Å | 1.49Å | |
CA | HA | sing | 1.09Å | 0.98Å | |
C | O | doub | 1.21Å | 1.24Å | |
C | NXT | sing | 1.35Å | 1.32Å | |
CB | CG | sing | 1.51Å | 1.49Å | |
CB | HB1 | sing | 1.09Å | 0.97Å | |
CB | HB2 | sing | 1.09Å | 0.97Å | |
CG | CD1 | doub | 1.38Å | 1.37Å | Aromatic |
CG | CD2 | sing | 1.38Å | 1.39Å | Aromatic |
CD1 | CE1 | sing | 1.38Å | 1.41Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 0.93Å | |
CD2 | CE2 | doub | 1.38Å | 1.38Å | Aromatic |
CD2 | HD2 | sing | 1.08Å | 0.93Å | |
CE1 | CZ | doub | 1.39Å | 1.39Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 0.93Å | |
CE2 | CZ | sing | 1.39Å | 1.38Å | Aromatic |
CE2 | HE2 | sing | 1.08Å | 0.93Å | |
OH | CZ | sing | 1.36Å | 1.39Å | |
OH | HH | sing | 0.97Å | 0.82Å | |
NXT | HT21 | sing | 0.97Å | 0.86Å | |
NXT | HT22 | sing | 0.97Å | 0.86Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H0 | 119.2° | 106.7° |
CA | N | H | 108.7° | 106.7° |
N | CA | C | 106.6° | 109.5° |
N | CA | CB | 113.9° | 109.5° |
N | CA | HA | 109.3° | 109.5° |
H0 | N | H | 108.7° | 106.7° |
C | CA | CB | 108.4° | 109.5° |
C | CA | HA | 109.3° | 109.4° |
CA | C | O | 115.7° | 120.0° |
CA | C | NXT | 117.3° | 120.0° |
CB | CA | HA | 109.3° | 109.4° |
CA | CB | CG | 122.3° | 109.5° |
CA | CB | HB1 | 106.8° | 109.4° |
CA | CB | HB2 | 106.7° | 109.5° |
O | C | NXT | 127.0° | 120.0° |
C | NXT | HT21 | 120.0° | 120.0° |
C | NXT | HT22 | 120.0° | 120.0° |
CG | CB | HB1 | 106.8° | 109.5° |
CG | CB | HB2 | 106.7° | 109.5° |
CB | CG | CD1 | 125.3° | 120.0° |
CB | CG | CD2 | 115.0° | 120.0° |
HB1 | CB | HB2 | 106.7° | 109.4° |
CD1 | CG | CD2 | 119.7° | 120.1° |
CG | CD1 | CE1 | 123.8° | 120.0° |
CG | CD1 | HD1 | 118.1° | 120.0° |
CG | CD2 | CE2 | 117.1° | 120.1° |
CG | CD2 | HD2 | 121.4° | 119.9° |
CE1 | CD1 | HD1 | 118.1° | 120.0° |
CD1 | CE1 | CZ | 115.5° | 120.0° |
CD1 | CE1 | HE1 | 122.2° | 120.0° |
CE2 | CD2 | HD2 | 121.5° | 120.0° |
CD2 | CE2 | CZ | 123.1° | 119.9° |
CD2 | CE2 | HE2 | 118.4° | 120.0° |
CZ | CE1 | HE1 | 122.3° | 120.1° |
CE1 | CZ | CE2 | 120.7° | 119.9° |
CE1 | CZ | OH | 121.5° | 120.1° |
CZ | CE2 | HE2 | 118.5° | 120.1° |
CE2 | CZ | OH | 117.8° | 120.0° |
CZ | OH | HH | 109.5° | 106.9° |
HT21 | NXT | HT22 | 120.0° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H0 | H | 125.2° | 113.8° |
N | CA | C | CB | 123.0° | 120.1° |
N | CA | C | HA | 118.0° | 120.0° |
N | CA | CB | HA | 122.5° | 120.0° |
N | CA | C | O | 10.4° | 30.0° |
N | CA | C | NXT | 169.9° | 150.0° |
N | CA | CB | CG | 31.9° | 59.9° |
N | CA | CB | HB1 | 91.3° | 60.1° |
N | CA | CB | HB2 | 154.9° | 180.0° |
H0 | N | CA | C | 52.5° | 60.1° |
H0 | N | CA | CB | 67.0° | 60.0° |
H0 | N | CA | HA | 170.5° | 180.0° |
H | N | CA | C | 72.8° | 173.8° |
H | N | CA | CB | 167.8° | 53.7° |
H | N | CA | HA | 45.3° | 66.2° |
C | CA | CB | HA | 119.0° | 120.0° |
CA | C | O | NXT | 179.8° | 180.0° |
C | CA | CB | CG | 150.4° | 180.0° |
C | CA | CB | HB1 | 27.2° | 60.0° |
C | CA | CB | HB2 | 86.6° | 59.9° |
CA | C | NXT | HT21 | 179.7° | 180.0° |
CA | C | NXT | HT22 | 0.2° | 0.1° |
CB | CA | C | O | 112.7° | 90.0° |
CB | CA | C | NXT | 67.1° | 89.9° |
CA | CB | CG | HB1 | 123.2° | 120.0° |
CA | CB | CG | HB2 | 123.0° | 120.1° |
CA | CB | HB1 | HB2 | 113.8° | 120.0° |
CA | CB | CG | CD1 | 64.6° | 90.0° |
CA | CB | CG | CD2 | 115.7° | 90.3° |
HA | CA | C | O | 128.3° | 150.0° |
HA | CA | C | NXT | 51.9° | 30.0° |
HA | CA | CB | CG | 90.6° | 60.0° |
HA | CA | CB | HB1 | 146.2° | 179.9° |
HA | CA | CB | HB2 | 32.4° | 60.0° |
O | C | NXT | HT21 | 0.1° | 0.1° |
O | C | NXT | HT22 | 180.0° | 179.9° |
C | NXT | HT21 | HT22 | 179.9° | 179.9° |
CG | CB | HB1 | HB2 | 113.8° | 120.0° |
CB | CG | CD1 | CD2 | 179.6° | 179.7° |
CB | CG | CD1 | CE1 | 179.9° | 180.0° |
CB | CG | CD1 | HD1 | 0.1° | 0.0° |
CB | CG | CD2 | CE2 | 179.2° | 179.7° |
CB | CG | CD2 | HD2 | 0.8° | 0.3° |
HB1 | CB | CG | CD1 | 58.5° | 30.0° |
HB1 | CB | CG | CD2 | 121.1° | 149.7° |
HB2 | CB | CG | CD1 | 172.3° | 150.0° |
HB2 | CB | CG | CD2 | 7.3° | 29.8° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CD1 | CG | CD2 | CE2 | 0.5° | 0.5° |
CD1 | CG | CD2 | HD2 | 179.5° | 180.0° |
CG | CD1 | CE1 | CZ | 0.7° | 0.1° |
CG | CD1 | CE1 | HE1 | 179.3° | 179.9° |
CD2 | CG | CD1 | CE1 | 0.4° | 0.3° |
CD2 | CG | CD1 | HD1 | 179.5° | 179.7° |
CG | CD2 | CE2 | HD2 | 180.0° | 179.5° |
CG | CD2 | CE2 | CZ | 1.1° | 0.5° |
CG | CD2 | CE2 | HE2 | 178.9° | 179.7° |
CD1 | CE1 | CZ | HE1 | 180.0° | 180.0° |
CD1 | CE1 | CZ | CE2 | 0.1° | 0.0° |
CD1 | CE1 | CZ | OH | 178.5° | 180.0° |
HD1 | CD1 | CE1 | CZ | 179.2° | 180.0° |
HD1 | CD1 | CE1 | HE1 | 0.8° | 0.0° |
CD2 | CE2 | CZ | CE1 | 0.8° | 0.2° |
CD2 | CE2 | CZ | HE2 | 180.0° | 179.8° |
CD2 | CE2 | CZ | OH | 179.5° | 179.8° |
HD2 | CD2 | CE2 | CZ | 178.9° | 180.0° |
HD2 | CD2 | CE2 | HE2 | 1.1° | 0.2° |
CE1 | CZ | CE2 | OH | 178.7° | 180.0° |
CE1 | CZ | CE2 | HE2 | 179.2° | 180.0° |
CE1 | CZ | OH | HH | 0.4° | 89.9° |
HE1 | CE1 | CZ | CE2 | 179.9° | 180.0° |
HE1 | CE1 | CZ | OH | 1.4° | 0.1° |
CE2 | CZ | OH | HH | 179.1° | 90.1° |
HE2 | CE2 | CZ | OH | 0.5° | 0.1° |