Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.47Å | |
CA | C | sing | 1.52Å | 1.52Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
C | O | doub | 1.23Å | 1.23Å | |
C | OXT | sing | 1.32Å | 1.32Å | |
CB | CG | sing | 1.52Å | 1.52Å | |
CG | CD1 | sing | 1.40Å | 1.40Å | |
CG | CD2 | doub | 1.40Å | 1.40Å | |
CD1 | CE1 | doub | 1.39Å | 1.39Å | |
CD2 | CE2 | sing | 1.39Å | 1.39Å | |
CE1 | CZ | sing | 1.38Å | 1.38Å | |
CE2 | CZ | doub | 1.37Å | 1.37Å | Aromatic |
CE2 | OE2 | sing | 1.37Å | 1.37Å | Aromatic |
CZ | OH | sing | 1.37Å | 1.37Å | Aromatic |
N | HN1 | sing | 1.00Å | 1.00Å | |
N | HN2 | sing | 1.00Å | 1.00Å | Aromatic |
CA | HA | sing | 1.10Å | 1.10Å | |
CB | HBC1 | sing | 1.10Å | 1.10Å | Aromatic |
CB | HBC2 | sing | 1.10Å | 1.10Å | |
OXT | HOT | sing | 0.95Å | 0.95Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
OE2 | HE2 | sing | 0.95Å | 0.95Å | |
OH | HH | sing | 0.95Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | C | 110.2° | 110.2° |
N | CA | CB | 113.3° | 113.3° |
CA | N | HN1 | 109.5° | 109.5° |
CA | N | HN2 | 109.4° | 109.4° |
N | CA | HA | 105.9° | 105.9° |
C | CA | CB | 108.3° | 108.3° |
CA | C | O | 121.1° | 121.1° |
CA | C | OXT | 115.5° | 115.5° |
C | CA | HA | 111.1° | 111.1° |
CA | CB | CG | 112.4° | 112.4° |
CB | CA | HA | 108.0° | 108.0° |
CA | CB | HBC1 | 108.5° | 108.5° |
CA | CB | HBC2 | 107.9° | 107.9° |
O | C | OXT | 123.4° | 123.4° |
C | OXT | HOT | 109.5° | 109.5° |
CB | CG | CD1 | 121.8° | 121.8° |
CB | CG | CD2 | 120.5° | 120.5° |
CG | CB | HBC1 | 108.5° | 108.5° |
CG | CB | HBC2 | 107.8° | 107.8° |
CD1 | CG | CD2 | 117.7° | 117.7° |
CG | CD1 | CE1 | 121.0° | 121.0° |
CG | CD1 | HD1 | 119.6° | 119.6° |
CG | CD2 | CE2 | 121.2° | 121.2° |
CG | CD2 | HD2 | 119.4° | 119.4° |
CD1 | CE1 | CZ | 119.7° | 119.7° |
CE1 | CD1 | HD1 | 119.5° | 119.5° |
CD1 | CE1 | HE1 | 120.2° | 120.2° |
CD2 | CE2 | CZ | 120.0° | 120.0° |
CD2 | CE2 | OE2 | 121.3° | 121.3° |
CE2 | CD2 | HD2 | 119.4° | 119.4° |
CE1 | CZ | CE2 | 120.4° | 120.4° |
CE1 | CZ | OH | 120.4° | 120.4° |
CZ | CE1 | HE1 | 120.1° | 120.1° |
CZ | CE2 | OE2 | 118.7° | 118.7° |
CE2 | CZ | OH | 119.0° | 119.0° |
CE2 | OE2 | HE2 | 109.5° | 109.5° |
CZ | OH | HH | 109.5° | 109.5° |
HN1 | N | HN2 | 109.5° | 109.5° |
HBC1 | CB | HBC2 | 111.8° | 111.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | C | CB | 124.5° | 124.5° |
N | CA | C | HA | 117.1° | 117.1° |
N | CA | CB | HA | 116.9° | 116.9° |
N | CA | C | O | 63.0° | 63.0° |
N | CA | C | OXT | 117.5° | 117.5° |
N | CA | CB | CG | 167.8° | 167.8° |
CA | N | HN1 | HN2 | 120.0° | 120.0° |
N | CA | CB | HBC1 | 47.9° | 47.9° |
N | CA | CB | HBC2 | 73.4° | 73.4° |
C | CA | CB | HA | 120.4° | 120.4° |
CA | C | O | OXT | 179.4° | 179.4° |
C | CA | CB | CG | 69.5° | 69.5° |
C | CA | N | HN1 | 137.9° | 137.9° |
C | CA | N | HN2 | 17.9° | 17.9° |
C | CA | CB | HBC1 | 170.5° | 170.5° |
C | CA | CB | HBC2 | 49.2° | 49.2° |
CA | C | OXT | HOT | 179.5° | 179.5° |
CB | CA | C | O | 61.5° | 61.5° |
CB | CA | C | OXT | 118.0° | 118.0° |
CA | CB | CG | HBC1 | 120.0° | 120.0° |
CA | CB | CG | HBC2 | 118.8° | 118.8° |
CA | CB | CG | CD1 | 81.8° | 81.8° |
CA | CB | CG | CD2 | 96.3° | 96.3° |
CB | CA | N | HN1 | 100.5° | 100.5° |
CB | CA | N | HN2 | 139.5° | 139.5° |
CA | CB | HBC1 | HBC2 | 118.8° | 118.8° |
O | C | CA | HA | 179.9° | 179.9° |
O | C | OXT | HOT | 0.0° | 0.0° |
OXT | C | CA | HA | 0.4° | 0.4° |
CB | CG | CD1 | CD2 | 178.1° | 178.1° |
CB | CG | CD1 | CE1 | 179.1° | 179.1° |
CB | CG | CD2 | CE2 | 179.0° | 179.0° |
CG | CB | CA | HA | 50.9° | 50.9° |
CG | CB | HBC1 | HBC2 | 118.8° | 118.8° |
CB | CG | CD1 | HD1 | 0.9° | 0.9° |
CB | CG | CD2 | HD2 | 1.0° | 1.0° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CD1 | CG | CD2 | CE2 | 0.8° | 0.8° |
CG | CD1 | CE1 | CZ | 0.8° | 0.8° |
CD1 | CG | CB | HBC1 | 38.2° | 38.2° |
CD1 | CG | CB | HBC2 | 159.4° | 159.4° |
CD1 | CG | CD2 | HD2 | 179.2° | 179.2° |
CG | CD1 | CE1 | HE1 | 179.3° | 179.3° |
CD2 | CG | CD1 | CE1 | 1.0° | 1.0° |
CG | CD2 | CE2 | HD2 | 180.0° | 180.0° |
CG | CD2 | CE2 | CZ | 1.0° | 1.0° |
CG | CD2 | CE2 | OE2 | 178.0° | 178.0° |
CD2 | CG | CB | HBC1 | 143.7° | 143.7° |
CD2 | CG | CB | HBC2 | 22.5° | 22.5° |
CD2 | CG | CD1 | HD1 | 179.0° | 179.0° |
CD1 | CE1 | CZ | HE1 | 180.0° | 180.0° |
CD1 | CE1 | CZ | CE2 | 2.7° | 2.7° |
CD1 | CE1 | CZ | OH | 178.5° | 178.5° |
CD2 | CE2 | CZ | CE1 | 2.8° | 2.8° |
CD2 | CE2 | CZ | OE2 | 177.0° | 177.0° |
CD2 | CE2 | CZ | OH | 178.7° | 178.7° |
CD2 | CE2 | OE2 | HE2 | 8.9° | 8.9° |
CE1 | CZ | CE2 | OH | 175.9° | 175.9° |
CE1 | CZ | CE2 | OE2 | 179.8° | 179.8° |
CZ | CE1 | CD1 | HD1 | 179.2° | 179.2° |
CE1 | CZ | OH | HH | 175.3° | 175.2° |
CZ | CE2 | CD2 | HD2 | 179.0° | 179.0° |
CE2 | CZ | CE1 | HE1 | 177.4° | 177.4° |
CZ | CE2 | OE2 | HE2 | 168.1° | 168.1° |
CE2 | CZ | OH | HH | 8.8° | 8.9° |
OE2 | CE2 | CZ | OH | 4.3° | 4.3° |
OE2 | CE2 | CD2 | HD2 | 2.0° | 2.0° |
OH | CZ | CE1 | HE1 | 1.5° | 1.5° |
HN1 | N | CA | HA | 17.6° | 17.6° |
HN2 | N | CA | HA | 102.4° | 102.4° |
HA | CA | CB | HBC1 | 69.1° | 69.1° |
HA | CA | CB | HBC2 | 169.7° | 169.7° |
HD1 | CD1 | CE1 | HE1 | 0.7° | 0.7° |