TY2
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.46Å | 1.46Å | |
CA | C | sing | 1.54Å | 1.54Å | |
CA | CB | sing | 1.54Å | 1.54Å | |
C | O | doub | 1.23Å | 1.23Å | |
C | OXT | sing | 1.33Å | 1.33Å | |
CB | CG | sing | 1.50Å | 1.50Å | |
CG | CD1 | sing | 1.40Å | 1.40Å | Aromatic |
CG | CD2 | doub | 1.41Å | 1.41Å | Aromatic |
CD1 | CE1 | doub | 1.41Å | 1.41Å | Aromatic |
CD2 | CE2 | sing | 1.39Å | 1.39Å | Aromatic |
CE1 | CZ | sing | 1.40Å | 1.40Å | Aromatic |
CE2 | CZ | doub | 1.38Å | 1.38Å | Aromatic |
CE2 | NE2 | sing | 1.34Å | 1.34Å | |
CZ | OH | sing | 1.39Å | 1.39Å | |
N | H | sing | 1.00Å | 1.00Å | |
N | H2 | sing | 1.00Å | 1.00Å | |
CA | HA | sing | 1.10Å | 1.10Å | |
CB | HA1 | sing | 1.10Å | 1.10Å | |
CB | HB2 | sing | 1.10Å | 1.10Å | |
OXT | HXT | sing | 0.95Å | 0.95Å | |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | HC | sing | 1.08Å | 1.08Å | |
CE1 | HD | sing | 1.08Å | 1.08Å | |
NE2 | HE21 | sing | 1.00Å | 1.00Å | |
NE2 | HE22 | sing | 1.00Å | 1.00Å | |
OH | HH | sing | 0.95Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | C | 112.2° | 112.2° |
N | CA | CB | 112.1° | 112.1° |
CA | N | H | 109.5° | 109.5° |
CA | N | H2 | 109.5° | 109.5° |
N | CA | HA | 106.2° | 106.2° |
C | CA | CB | 110.9° | 110.9° |
CA | C | O | 121.1° | 121.1° |
CA | C | OXT | 115.3° | 115.3° |
C | CA | HA | 107.5° | 107.5° |
CA | CB | CG | 107.5° | 107.5° |
CB | CA | HA | 107.6° | 107.6° |
CA | CB | HA1 | 110.1° | 110.1° |
CA | CB | HB2 | 110.5° | 110.5° |
O | C | OXT | 123.6° | 123.6° |
C | OXT | HXT | 109.5° | 109.5° |
CB | CG | CD1 | 120.0° | 120.0° |
CB | CG | CD2 | 120.9° | 120.9° |
CG | CB | HA1 | 110.1° | 110.1° |
CG | CB | HB2 | 110.6° | 110.6° |
CD1 | CG | CD2 | 118.9° | 118.9° |
CG | CD1 | CE1 | 119.9° | 119.9° |
CG | CD1 | HD1 | 120.0° | 120.0° |
CG | CD2 | CE2 | 121.2° | 121.2° |
CG | CD2 | HC | 119.4° | 119.4° |
CD1 | CE1 | CZ | 119.4° | 119.4° |
CE1 | CD1 | HD1 | 120.1° | 120.1° |
CD1 | CE1 | HD | 120.3° | 120.3° |
CD2 | CE2 | CZ | 119.3° | 119.3° |
CD2 | CE2 | NE2 | 126.1° | 126.1° |
CE2 | CD2 | HC | 119.4° | 119.4° |
CE1 | CZ | CE2 | 121.2° | 121.2° |
CE1 | CZ | OH | 123.8° | 123.8° |
CZ | CE1 | HD | 120.3° | 120.3° |
CZ | CE2 | NE2 | 114.5° | 114.5° |
CE2 | CZ | OH | 115.0° | 115.0° |
CE2 | NE2 | HE21 | 109.5° | 109.5° |
CE2 | NE2 | HE22 | 109.5° | 109.5° |
CZ | OH | HH | 109.5° | 109.5° |
H | N | H2 | 109.5° | 109.5° |
HA1 | CB | HB2 | 108.0° | 108.0° |
HE21 | NE2 | HE22 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | C | CB | 126.3° | 126.3° |
N | CA | C | HA | 116.4° | 116.4° |
N | CA | CB | HA | 116.4° | 116.4° |
N | CA | C | O | 109.0° | 109.0° |
N | CA | C | OXT | 70.7° | 70.7° |
N | CA | CB | CG | 157.1° | 157.1° |
CA | N | H | H2 | 120.0° | 120.0° |
N | CA | CB | HA1 | 37.1° | 37.1° |
N | CA | CB | HB2 | 82.1° | 82.1° |
C | CA | CB | HA | 117.3° | 117.3° |
CA | C | O | OXT | 179.7° | 179.7° |
C | CA | CB | CG | 76.6° | 76.6° |
C | CA | N | H | 54.5° | 54.5° |
C | CA | N | H2 | 174.5° | 174.5° |
C | CA | CB | HA1 | 163.4° | 163.4° |
C | CA | CB | HB2 | 44.2° | 44.2° |
CA | C | OXT | HXT | 179.7° | 179.7° |
CB | CA | C | O | 17.3° | 17.3° |
CB | CA | C | OXT | 163.0° | 163.0° |
CA | CB | CG | HA1 | 120.0° | 120.0° |
CA | CB | CG | HB2 | 120.8° | 120.8° |
CA | CB | CG | CD1 | 73.8° | 73.8° |
CA | CB | CG | CD2 | 100.9° | 100.9° |
CB | CA | N | H | 71.1° | 71.1° |
CB | CA | N | H2 | 48.9° | 48.9° |
CA | CB | HA1 | HB2 | 120.8° | 120.8° |
O | C | CA | HA | 134.6° | 134.6° |
O | C | OXT | HXT | 0.0° | 0.0° |
OXT | C | CA | HA | 45.7° | 45.7° |
CB | CG | CD1 | CD2 | 174.8° | 174.8° |
CB | CG | CD1 | CE1 | 176.6° | 176.6° |
CB | CG | CD2 | CE2 | 175.7° | 175.7° |
CG | CB | CA | HA | 40.7° | 40.7° |
CG | CB | HA1 | HB2 | 120.8° | 120.8° |
CB | CG | CD1 | HD1 | 3.4° | 3.4° |
CB | CG | CD2 | HC | 4.3° | 4.3° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CD1 | CG | CD2 | CE2 | 1.0° | 1.0° |
CG | CD1 | CE1 | CZ | 0.7° | 0.7° |
CD1 | CG | CB | HA1 | 46.2° | 46.2° |
CD1 | CG | CB | HB2 | 165.4° | 165.4° |
CD1 | CG | CD2 | HC | 179.1° | 179.1° |
CG | CD1 | CE1 | HD | 179.3° | 179.3° |
CD2 | CG | CD1 | CE1 | 1.8° | 1.8° |
CG | CD2 | CE2 | HC | 180.0° | 180.0° |
CG | CD2 | CE2 | CZ | 1.0° | 1.0° |
CG | CD2 | CE2 | NE2 | 178.8° | 178.8° |
CD2 | CG | CB | HA1 | 139.1° | 139.1° |
CD2 | CG | CB | HB2 | 19.9° | 19.9° |
CD2 | CG | CD1 | HD1 | 178.2° | 178.2° |
CD1 | CE1 | CZ | HD | 180.0° | 180.0° |
CD1 | CE1 | CZ | CE2 | 1.4° | 1.4° |
CD1 | CE1 | CZ | OH | 178.1° | 178.1° |
CD2 | CE2 | CZ | CE1 | 2.2° | 2.2° |
CD2 | CE2 | CZ | NE2 | 178.0° | 178.0° |
CD2 | CE2 | CZ | OH | 179.2° | 179.2° |
CD2 | CE2 | NE2 | HE21 | 160.6° | 160.6° |
CD2 | CE2 | NE2 | HE22 | 79.4° | 79.4° |
CE1 | CZ | CE2 | OH | 177.0° | 177.0° |
CE1 | CZ | CE2 | NE2 | 179.7° | 179.7° |
CZ | CE1 | CD1 | HD1 | 179.3° | 179.3° |
CE1 | CZ | OH | HH | 3.4° | 3.4° |
CZ | CE2 | CD2 | HC | 178.9° | 178.9° |
CE2 | CZ | CE1 | HD | 178.6° | 178.6° |
CZ | CE2 | NE2 | HE21 | 21.5° | 21.5° |
CZ | CE2 | NE2 | HE22 | 98.5° | 98.5° |
CE2 | CZ | OH | HH | 173.5° | 173.5° |
NE2 | CE2 | CZ | OH | 2.8° | 2.8° |
NE2 | CE2 | CD2 | HC | 1.1° | 1.1° |
CE2 | NE2 | HE21 | HE22 | 120.0° | 120.0° |
OH | CZ | CE1 | HD | 2.0° | 2.0° |
H | N | CA | HA | 171.7° | 171.7° |
H2 | N | CA | HA | 68.3° | 68.3° |
HA | CA | CB | HA1 | 79.3° | 79.3° |
HA | CA | CB | HB2 | 161.5° | 161.5° |
HD1 | CD1 | CE1 | HD | 0.7° | 0.7° |