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Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5N4sing1.34Å1.32ÅAromatic
C5C4doub1.38Å1.41ÅAromatic
N1C1sing1.38Å1.35Å
N4N5sing1.40Å1.38ÅAromatic
C4C1sing1.46Å1.41ÅAromatic
C4C3sing1.47Å1.38ÅAromatic
C1N2doub1.33Å1.33ÅAromatic
N5C3doub1.31Å1.35ÅAromatic
C3N3sing1.35Å1.34ÅAromatic
N2C2sing1.32Å1.35ÅAromatic
N3C2doub1.31Å1.34ÅAromatic
N1H1sing0.97Å1.00Å
N1H2sing0.97Å1.00Å
C2H3sing1.08Å1.08Å
N4H4sing0.97Å1.00Å
C5H5sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N4C5C4107.7°107.8°
C5N4N5108.2°110.0°
C5N4H4125.9°125.0°
N4C5H5126.1°126.1°
C5C4C1133.7°136.1°
C5C4C3107.4°106.6°
C4C5H5126.1°126.1°
N1C1C4121.3°121.3°
N1C1N2119.8°121.2°
C1N1H1109.5°120.0°
C1N1H2109.5°120.0°
N4N5C3109.8°109.1°
N5N4H4125.9°125.1°
C1C4C3118.6°117.3°
C4C1N2118.9°117.5°
C4C3N5106.8°106.6°
C4C3N3121.0°117.7°
C1N2C2120.0°122.1°
N5C3N3132.2°135.7°
C3N3C2118.4°120.9°
N2C2N3123.1°124.6°
N2C2H3118.5°117.7°
N3C2H3118.5°117.8°
H1N1H2109.4°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N4C5C4H5180.0°179.9°
C5N4N5H4180.0°180.0°
N4C5C4C1175.6°179.9°
N4C5C4C31.9°0.0°
C5N4N5C31.7°0.0°
C5C4C1N15.6°0.3°
C4C5N4N52.2°0.0°
C5C4C1C3173.1°179.9°
C5C4C1N2177.3°179.9°
C5C4C3N50.9°0.0°
C5C4C3N3177.3°179.4°
C4C5N4H4177.8°180.0°
N1C1C4N2177.0°179.7°
N1C1C4C3178.8°179.7°
N1C1N2C2179.8°180.0°
C1N1H1H2120.0°180.0°
N4N5C3C40.4°0.0°
N4N5C3N3178.3°179.2°
N5N4C5H5177.8°179.9°
C1C4C3N5175.7°179.9°
C1C4C3N32.5°0.5°
C4C1N2C23.1°0.3°
C4C1N1H1177.0°179.7°
C4C1N1H263.0°0.3°
C1C4C5H54.4°0.1°
C3C4C1N24.2°0.0°
C4C3N5N3177.9°179.2°
C4C3N3C20.3°0.9°
C3C4C5H5178.1°179.9°
C1N2C2N30.3°0.0°
N2C1N1H10.0°0.0°
N2C1N1H2120.0°180.0°
C1N2C2H3179.8°180.0°
N5C3N3C2178.0°180.0°
C3N5N4H4178.3°180.0°
C3N3C2N21.5°0.6°
C3N3C2H3178.5°179.4°
N2C2N3H3180.0°180.0°
H4N4C5H52.2°0.1°

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PDB entries from 2024-10-09

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