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SummaryGeometryRelated PDB entries

TVO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C09C08sing1.53Å1.51Å
C09C10sing1.51Å1.44Å
C08N07sing1.47Å1.39Å
C11C10doub1.39Å1.46ÅAromatic
C11C12sing1.38Å1.37ÅAromatic
C03N04sing1.48Å1.56Å
C03C02sing1.55Å1.34Å
N04C05sing1.47Å1.54Å
C02O01sing1.43Å1.45Å
C02C06sing1.55Å1.64Å
C10C15sing1.38Å1.26ÅAromatic
C12C13doub1.38Å1.35ÅAromatic
N07C06sing1.47Å1.38Å
N07C16sing1.47Å1.44Å
C15C16sing1.51Å1.58Å
C15C14doub1.39Å1.46ÅAromatic
C05C06sing1.54Å1.38Å
C13C14sing1.38Å1.37ÅAromatic
C13H1sing1.08Å1.08Å
C02H2sing1.09Å1.10Å
C03H3sing1.09Å1.10Å
C03H4sing1.09Å1.10Å
C05H5sing1.09Å1.10Å
C05H6sing1.09Å1.10Å
C06H7sing1.09Å1.10Å
C08H8sing1.09Å1.10Å
C08H9sing1.09Å1.10Å
C09H10sing1.09Å1.10Å
C09H11sing1.09Å1.10Å
C11H12sing1.08Å1.08Å
C12H13sing1.08Å1.08Å
C14H14sing1.08Å1.08Å
C16H15sing1.09Å1.10Å
C16H16sing1.09Å1.10Å
N04H17sing1.01Å1.00Å
O01H20sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C08C09C10113.7°110.0°
C09C08N07112.1°108.5°
C09C08H8108.8°109.6°
C09C08H9108.8°109.8°
C08C09H10108.4°109.4°
C08C09H11108.4°109.4°
C09C10C11118.0°118.5°
C09C10C15122.0°121.6°
C10C09H10108.4°109.4°
C10C09H11108.4°109.4°
C08N07C06116.9°110.9°
C08N07C16113.9°110.2°
N07C08H8108.8°109.6°
N07C08H9108.8°109.7°
C10C11C12119.7°120.4°
C11C10C15119.9°119.8°
C10C11H12120.1°119.8°
C11C12C13120.3°119.8°
C12C11H12120.1°119.8°
C11C12H13119.9°120.1°
N04C03C02100.0°104.8°
C03N04C05102.8°108.6°
N04C03H3111.8°110.4°
N04C03H4111.8°110.4°
C03N04H17111.1°111.0°
C03C02O01114.8°111.0°
C03C02C06108.5°101.6°
C03C02H2109.8°111.0°
C02C03H3111.8°110.4°
C02C03H4111.8°110.3°
N04C05C06108.8°107.3°
N04C05H5109.6°109.9°
N04C05H6109.6°110.0°
C05N04H17111.1°111.0°
O01C02C06109.1°111.0°
O01C02H2108.3°110.9°
C02O01H20109.5°114.1°
C02C06N07114.4°110.7°
C02C06C05102.2°103.0°
C06C02H2106.1°111.0°
C02C06H7106.7°110.7°
C10C15C16122.1°121.9°
C10C15C14120.4°119.7°
C12C13C14120.2°119.9°
C12C13H1119.9°120.0°
C13C12H13119.8°120.1°
C06N07C16113.6°111.0°
N07C06C05113.2°110.7°
N07C06H7110.0°110.7°
N07C16C15111.5°110.4°
N07C16H15108.9°109.2°
N07C16H16109.0°109.2°
C16C15C14117.5°118.4°
C15C16H15109.0°109.3°
C15C16H16109.0°109.3°
C15C14C13119.5°120.4°
C15C14H14120.3°119.8°
C06C05H5109.6°109.9°
C06C05H6109.7°109.9°
C05C06H7110.0°110.7°
C14C13H1119.9°120.1°
C13C14H14120.3°119.8°
H3C03H4109.5°110.4°
H5C05H6109.5°109.9°
H8C08H9109.5°109.7°
H10C09H11109.5°109.3°
H15C16H16109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C08C09C10H10120.6°120.1°
C08C09C10H11120.6°120.2°
C09C08N07H8120.4°119.7°
C09C08N07H9120.4°119.9°
C08C09C10C11163.4°163.5°
C08C09C10C1517.0°16.7°
C09C08N07C06165.7°165.3°
C09C08N07C1658.5°71.3°
C09C08H8H9118.8°120.6°
C08C09H10H11118.1°119.8°
C10C09C08N0746.2°50.3°
C09C10C11C15179.5°179.8°
C09C10C11C12179.6°179.6°
C09C10C15C160.1°0.3°
C09C10C15C14179.5°179.7°
C10C09C08H874.2°69.4°
C10C09C08H9166.6°170.1°
C10C09H10H11118.1°119.7°
C09C10C11H120.4°0.3°
C08N07C06C0250.8°67.0°
C08N07C06C16135.8°122.9°
C08N07C16C1540.0°52.6°
C08N07C06C0565.7°179.4°
C08N07C06H7170.8°56.3°
N07C08H8H9118.8°120.4°
N07C08C09H1074.4°170.5°
N07C08C09H11166.9°69.8°
C08N07C16H1580.3°172.9°
C08N07C16H16160.3°67.6°
C10C11C12H12180.0°179.8°
C10C11C12C130.2°0.1°
C11C10C15C16179.6°179.9°
C11C10C15C140.1°0.1°
C11C10C09H1075.9°43.3°
C11C10C09H1142.8°76.4°
C10C11C12H13179.8°180.0°
C12C11C10C150.0°0.3°
C11C12C13H13180.0°179.9°
C11C12C13C140.5°0.2°
C11C12C13H1179.5°179.9°
N04C03C02H3118.4°118.8°
N04C03C02H4118.4°118.8°
C03N04C05H17118.9°122.2°
N04C03C02O01161.2°155.2°
N04C03C02C0638.9°37.1°
C03N04C05C0627.4°1.0°
N04C03C02H276.6°81.0°
N04C03H3H4124.4°122.4°
C03N04C05H592.5°120.4°
C03N04C05H6147.3°118.5°
C02C03N04C0540.9°24.1°
C03C02O01C06121.9°112.3°
C03C02O01H2123.0°123.8°
C03C02C06H2117.9°118.1°
C03C02C06N07146.2°154.0°
C03C02C06C0523.5°35.6°
C02C03H3H4124.4°122.3°
C03C02C06H791.9°82.7°
C02C03N04H17159.9°146.4°
C03C02O01H20180.0°67.8°
N04C05C06C024.9°22.3°
N04C05C06N07118.6°140.7°
N04C05C06H5119.9°119.4°
N04C05C06H6119.9°119.6°
C05N04C03H3159.4°94.7°
C05N04C03H477.5°142.9°
N04C05H5H6120.3°121.2°
N04C05C06H7117.9°96.1°
O01C02C06H2116.5°123.8°
O01C02C06N0788.2°87.9°
O01C02C06C05149.1°153.7°
O01C02C03H380.4°36.4°
O01C02C03H442.8°86.0°
O01C02C06H733.7°35.3°
C02C06N07C05116.5°113.6°
C02C06N07H7120.1°123.2°
C02C06N07C1685.1°170.1°
C02C06C05H7113.0°118.4°
C06C02C03H3157.4°81.8°
C06C02C03H479.5°155.9°
C02C06C05H5114.9°97.1°
C02C06C05H6124.8°141.8°
C06C02O01H2058.1°180.0°
C10C15C16N0710.4°17.5°
C10C15C16C14179.6°180.0°
C10C15C14C130.4°0.2°
C15C10C09H10103.6°136.9°
C15C10C09H11137.7°103.4°
C15C10C11H12180.0°179.9°
C10C15C14H14179.6°179.8°
C10C15C16H15109.9°137.7°
C10C15C16H16130.7°102.6°
C12C13C14C150.6°0.3°
C12C13C14H1180.0°179.7°
C13C12C11H12179.8°180.0°
C12C13C14H14179.3°180.0°
C06N07C16C15177.2°176.0°
N07C06C05H7123.4°123.2°
N07C06C02H228.3°35.9°
N07C06C05H5121.5°21.3°
N07C06C05H61.3°99.7°
C06N07C08H873.9°75.0°
C06N07C08H945.3°45.4°
C06N07C16H1556.9°63.8°
C06N07C16H1662.5°55.8°
N07C16C15H15120.3°120.2°
N07C16C15H16120.3°120.1°
N07C16C15C14169.2°162.5°
C16N07C06C05158.4°56.4°
C16N07C06H735.0°66.7°
C16N07C08H861.9°48.3°
C16N07C08H9178.9°168.8°
N07C16H15H16119.0°119.4°
C16C15C14C13180.0°179.8°
C16C15C14H140.0°0.1°
C15C16H15H16119.1°119.6°
C15C14C13H14180.0°179.7°
C15C14C13H1179.4°180.0°
C14C15C16H1570.5°42.2°
C14C15C16H1648.9°77.4°
C05C06C02H294.4°82.5°
C06C05H5H6120.4°121.0°
C06C05N04H17146.3°123.3°
C14C13C12H13179.5°179.7°
H1C13C12H130.5°0.0°
H1C13C14H140.7°0.3°
H2C02C03H341.8°160.1°
H2C02C03H4165.0°37.8°
H2C02C06H7150.2°159.2°
H2C02O01H2057.0°56.1°
H3C03N04H1781.7°27.6°
H4C03N04H1741.4°94.8°
H5C05C06H71.9°144.5°
H5C05N04H1726.4°117.3°
H6C05C06H7122.2°23.4°
H6C05N04H1793.7°3.8°
H8C08C09H10165.2°50.8°
H8C08C09H1146.5°170.5°
H9C08C09H1046.0°69.7°
H9C08C09H1172.7°50.0°
H12C11C12H130.2°0.2°

226262

PDB entries from 2024-10-16

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