TVD

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O6	C6	sing	1.43Å	1.46Å
C6	C5	sing	1.53Å	1.53Å
O9	C9	doub	1.21Å	1.23Å
C5	O5	sing	1.43Å	1.39Å
C5	C4	sing	1.53Å	1.55Å
O5	C1	sing	1.43Å	1.39Å
C9	C10	sing	1.51Å	1.51Å
C9	N1	sing	1.35Å	1.40Å
N1	C1	sing	1.47Å	1.46Å
C1	C2	sing	1.53Å	1.56Å
C4	O4	sing	1.43Å	1.40Å
C4	C3	sing	1.53Å	1.49Å
C2	C3	sing	1.53Å	1.52Å
C2	N2	sing	1.47Å	1.49Å
C3	O3	sing	1.43Å	1.46Å
N2	C7	sing	1.35Å	1.36Å
O7	C7	doub	1.21Å	1.23Å
C7	C8	sing	1.51Å	1.52Å
C8	H81	sing	1.09Å	1.10Å
C8	H82	sing	1.09Å	1.10Å
C8	H83	sing	1.09Å	1.10Å
N2	HN2	sing	0.97Å	1.00Å
C2	H2	sing	1.09Å	1.10Å
C1	H1	sing	1.09Å	1.10Å
N1	HN1	sing	0.97Å	1.00Å
C10	H11	sing	1.09Å	1.10Å
C10	H12	sing	1.09Å	1.10Å
C10	H13	sing	1.09Å	1.10Å
C3	H3	sing	1.09Å	1.10Å
O3	HO3	sing	0.97Å	0.95Å
C4	H4	sing	1.09Å	1.10Å
C5	H5	sing	1.09Å	1.10Å
C6	H61	sing	1.09Å	1.10Å
C6	H62	sing	1.09Å	1.10Å
O6	HO6	sing	0.97Å	0.95Å
O4	HO4	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O6	C6	C5	118.8°	109.4°
O6	C6	H61	107.1°	109.5°
O6	C6	H62	107.1°	109.5°
C6	O6	HO6	109.5°	114.0°
C6	C5	O5	107.9°	109.5°
C6	C5	C4	111.8°	109.4°
C6	C5	H5	109.6°	109.5°
C5	C6	H61	107.1°	109.5°
C5	C6	H62	107.1°	109.5°
O9	C9	C10	121.4°	119.9°
O9	C9	N1	120.6°	120.0°
O5	C5	C4	106.4°	109.4°
C5	O5	C1	117.0°	114.1°
O5	C5	H5	111.7°	109.5°
C5	C4	O4	109.3°	109.5°
C5	C4	C3	109.1°	109.1°
C5	C4	H4	110.0°	109.6°
C4	C5	H5	109.4°	109.5°
O5	C1	N1	104.0°	109.5°
O5	C1	C2	105.4°	109.5°
O5	C1	H1	113.9°	109.5°
C10	C9	N1	118.0°	120.0°
C9	C10	H11	109.5°	109.4°
C9	C10	H12	109.5°	109.5°
C9	C10	H13	109.5°	109.5°
C9	N1	C1	116.3°	120.0°
C9	N1	HN1	121.8°	120.0°
N1	C1	C2	109.4°	109.5°
N1	C1	H1	112.6°	109.4°
C1	N1	HN1	121.8°	120.0°
C1	C2	C3	109.9°	109.1°
C1	C2	N2	110.4°	109.5°
C1	C2	H2	110.2°	109.6°
C2	C1	H1	111.1°	109.5°
O4	C4	C3	105.0°	109.5°
O4	C4	H4	112.3°	109.5°
C4	O4	HO4	109.5°	114.0°
C4	C3	C2	109.2°	109.0°
C4	C3	O3	111.9°	109.5°
C4	C3	H3	110.1°	109.6°
C3	C4	H4	110.9°	109.6°
C3	C2	N2	104.0°	109.5°
C2	C3	O3	105.3°	109.5°
C3	C2	H2	110.8°	109.5°
C2	C3	H3	109.7°	109.6°
C2	N2	C7	117.0°	120.0°
C2	N2	HN2	121.5°	120.0°
N2	C2	H2	111.3°	109.5°
O3	C3	H3	110.6°	109.5°
C3	O3	HO3	109.5°	114.0°
N2	C7	O7	124.9°	120.0°
N2	C7	C8	111.8°	120.0°
C7	N2	HN2	121.5°	120.0°
O7	C7	C8	123.3°	119.9°
C7	C8	H81	109.5°	109.5°
C7	C8	H82	109.5°	109.5°
C7	C8	H83	109.5°	109.4°
H81	C8	H82	109.5°	109.5°
H81	C8	H83	109.5°	109.5°
H82	C8	H83	109.5°	109.5°
H11	C10	H12	109.4°	109.5°
H11	C10	H13	109.5°	109.4°
H12	C10	H13	109.4°	109.4°
H61	C6	H62	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O6	C6	C5	H61	121.3°	120.0°
O6	C6	C5	H62	121.3°	120.0°
O6	C6	C5	O5	71.2°	65.0°
O6	C6	C5	C4	45.5°	175.1°
O6	C6	C5	H5	167.0°	55.0°
O6	C6	H61	H62	115.8°	120.0°
C6	C5	O5	C4	120.1°	119.9°
C6	C5	O5	H5	120.5°	120.1°
C6	C5	C4	H5	121.7°	120.0°
C6	C5	O5	C1	173.4°	178.9°
C6	C5	C4	O4	69.7°	62.5°
C6	C5	C4	C3	176.0°	177.6°
C6	C5	C4	H4	54.1°	57.6°
C5	C6	H61	H62	115.8°	120.0°
C5	C6	O6	HO6	180.0°	180.0°
O9	C9	C10	N1	178.1°	180.0°
O9	C9	N1	C1	20.3°	0.0°
O9	C9	N1	HN1	159.7°	179.9°
O9	C9	C10	H11	0.0°	120.1°
O9	C9	C10	H12	120.0°	0.0°
O9	C9	C10	H13	120.0°	120.0°
O5	C5	C4	H5	120.8°	120.0°
C5	O5	C1	N1	179.9°	178.8°
C5	O5	C1	C2	65.0°	61.2°
O5	C5	C4	O4	172.7°	177.5°
O5	C5	C4	C3	58.4°	57.7°
C5	O5	C1	H1	57.0°	58.9°
O5	C5	C4	H4	63.5°	62.3°
O5	C5	C6	H61	167.4°	175.0°
O5	C5	C6	H62	50.1°	55.0°
C4	C5	O5	C1	66.5°	61.2°
C5	C4	O4	C3	116.9°	119.6°
C5	C4	O4	H4	122.5°	120.2°
C5	C4	C3	H4	121.4°	120.0°
C5	C4	C3	C2	56.9°	57.0°
C5	C4	C3	O3	173.0°	176.9°
C5	C4	C3	H3	63.6°	62.9°
C4	C5	C6	H61	75.9°	55.1°
C4	C5	C6	H62	166.8°	64.9°
C5	C4	O4	HO4	180.0°	60.4°
O5	C1	N1	C9	103.3°	95.0°
O5	C1	N1	C2	112.2°	120.0°
O5	C1	N1	H1	123.8°	120.0°
O5	C1	C2	H1	123.8°	120.0°
O5	C1	C2	C3	56.4°	57.6°
O5	C1	C2	N2	170.6°	177.5°
O5	C1	C2	H2	66.0°	62.3°
O5	C1	N1	HN1	76.7°	84.9°
C1	O5	C5	H5	52.8°	58.8°
C10	C9	N1	C1	161.5°	180.0°
C10	C9	N1	HN1	18.5°	0.1°
C9	C10	H11	H12	120.0°	120.1°
C9	C10	H11	H13	120.0°	120.0°
C9	C10	H12	H13	120.0°	120.0°
C9	N1	C1	HN1	180.0°	179.9°
C9	N1	C1	C2	144.4°	145.0°
C9	N1	C1	H1	20.4°	25.0°
N1	C9	C10	H11	178.1°	59.9°
N1	C9	C10	H12	58.1°	180.0°
N1	C9	C10	H13	61.8°	60.0°
N1	C1	C2	H1	124.9°	120.0°
N1	C1	C2	C3	167.7°	177.6°
N1	C1	C2	N2	78.1°	62.5°
N1	C1	C2	H2	45.3°	57.7°
C1	C2	C3	C4	56.5°	57.0°
C1	C2	C3	N2	118.2°	119.9°
C1	C2	C3	H2	122.1°	120.0°
C1	C2	N2	H2	122.8°	120.2°
C1	C2	C3	O3	176.7°	176.8°
C1	C2	N2	C7	95.0°	85.3°
C1	C2	N2	HN2	85.1°	94.7°
C2	C1	N1	HN1	35.6°	35.1°
C1	C2	C3	H3	64.3°	63.0°
O4	C4	C3	H4	121.6°	120.2°
O4	C4	C3	C2	174.0°	176.9°
O4	C4	C3	O3	69.9°	63.3°
O4	C4	C3	H3	53.5°	56.9°
O4	C4	C5	H5	52.0°	57.5°
C4	C3	C2	O3	120.3°	119.8°
C4	C3	C2	H3	120.8°	120.0°
C4	C3	C2	N2	174.7°	176.9°
C4	C3	O3	H3	123.1°	120.2°
C4	C3	C2	H2	65.6°	63.0°
C4	C3	O3	HO3	180.0°	60.5°
C3	C4	C5	H5	62.4°	62.4°
C3	C4	O4	HO4	63.1°	180.0°
C3	C2	N2	H2	119.4°	120.2°
C2	C3	O3	H3	118.4°	120.2°
C3	C2	N2	C7	147.2°	155.0°
C3	C2	N2	HN2	32.8°	25.0°
C3	C2	C1	H1	67.4°	62.4°
C2	C3	O3	HO3	61.5°	180.0°
C2	C3	C4	H4	64.5°	63.0°
N2	C2	C3	O3	65.0°	63.3°
C2	N2	C7	HN2	180.0°	180.0°
C2	N2	C7	O7	6.1°	0.0°
C2	N2	C7	C8	172.8°	179.7°
N2	C2	C1	H1	46.8°	57.5°
N2	C2	C3	H3	53.9°	56.9°
O3	C3	C2	H2	54.7°	56.9°
O3	C3	C4	H4	51.7°	56.9°
N2	C7	O7	C8	178.8°	179.7°
N2	C7	C8	H81	178.9°	179.7°
N2	C7	C8	H82	61.1°	59.7°
N2	C7	C8	H83	58.9°	60.3°
C7	N2	C2	H2	27.8°	34.8°
O7	C7	C8	H81	0.0°	0.1°
O7	C7	C8	H82	120.0°	120.0°
O7	C7	C8	H83	120.0°	120.0°
O7	C7	N2	HN2	173.8°	180.0°
C7	C8	H81	H82	120.0°	120.0°
C7	C8	H81	H83	120.0°	120.0°
C7	C8	H82	H83	120.0°	120.0°
C8	C7	N2	HN2	7.3°	0.3°
H81	C8	H82	H83	120.0°	120.0°
HN2	N2	C2	H2	152.2°	145.1°
H2	C2	C1	H1	170.2°	177.7°
H2	C2	C3	H3	173.6°	177.1°
H1	C1	N1	HN1	159.6°	155.1°
H11	C10	H12	H13	120.0°	120.0°
H3	C3	O3	HO3	56.9°	59.8°
H3	C3	C4	H4	175.0°	177.1°
H4	C4	C5	H5	175.8°	177.7°
H4	C4	O4	HO4	57.5°	59.8°
H5	C5	C6	H61	45.6°	64.9°
H5	C5	C6	H62	71.7°	175.1°
H61	C6	O6	HO6	58.7°	60.0°
H62	C6	O6	HO6	58.7°	60.0°

Release date:	2020-07-29
Definition date:	2020-04-01
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB
Derived from:	5NF7