TTS
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.46Å | 1.46Å | |
N | H | sing | 1.00Å | 1.00Å | |
N | H2 | sing | 1.00Å | 1.00Å | |
CA | CB | sing | 1.53Å | 1.55Å | |
CA | C | sing | 1.52Å | 1.52Å | |
CA | HA | sing | 1.10Å | 1.10Å | |
CB | CG | sing | 1.50Å | 1.51Å | |
CB | HB2 | sing | 1.10Å | 1.10Å | |
CB | HB3 | sing | 1.10Å | 1.10Å | |
C | O | doub | 1.22Å | 1.23Å | |
C | OXT | sing | 1.36Å | 28.15Å | |
CG | CD1 | sing | 1.49Å | 1.45Å | |
CG | CD2 | doub | 1.34Å | 1.44Å | |
CD1 | OD1 | doub | 1.23Å | 1.34Å | |
CD1 | CE1 | sing | 1.48Å | 1.43Å | |
CE1 | CZ | doub | 1.34Å | 1.44Å | |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CD2 | CE2 | sing | 1.48Å | 1.44Å | |
CD2 | HD2 | sing | 1.09Å | 1.08Å | |
CE2 | NE2 | doub | 1.30Å | 1.46Å | |
CE2 | CZ | sing | 1.48Å | 1.44Å | |
NE2 | C1 | sing | 1.45Å | 1.46Å | |
CZ | OH | sing | 1.38Å | 1.37Å | |
OH | HH | sing | 0.96Å | 0.95Å | |
C3' | C2' | sing | 1.39Å | 1.44Å | Aromatic |
C3' | C4' | doub | 1.40Å | 1.43Å | Aromatic |
C3' | H3' | sing | 1.09Å | 1.08Å | |
C2' | C1' | doub | 1.39Å | 1.44Å | Aromatic |
C2' | H2' | sing | 1.09Å | 1.08Å | |
C1' | C6' | sing | 1.39Å | 1.43Å | Aromatic |
C1' | C2 | sing | 1.51Å | 1.51Å | |
C6' | C5' | doub | 1.40Å | 1.43Å | Aromatic |
C6' | H6' | sing | 1.09Å | 1.08Å | |
C5' | C4' | sing | 1.39Å | 1.46Å | Aromatic |
C5' | H5' | sing | 1.09Å | 1.08Å | |
C4' | O1 | sing | 1.36Å | 1.38Å | |
C2 | C1 | sing | 1.53Å | 1.53Å | |
C2 | H21 | sing | 1.10Å | 1.10Å | |
C2 | H22 | sing | 1.10Å | 1.10Å | |
C1 | H11 | sing | 1.10Å | 1.10Å | |
C1 | H12 | sing | 1.10Å | 1.10Å | |
O1 | HO1 | sing | 0.97Å | 0.95Å | |
OXT | HXT | sing | 0.98Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 118.0° |
CA | N | H2 | 109.5° | 118.0° |
N | CA | CB | 107.0° | 110.2° |
N | CA | C | 115.1° | 106.3° |
N | CA | HA | 105.9° | 109.6° |
H | N | H2 | 109.4° | 122.6° |
CB | CA | C | 104.3° | 112.9° |
CB | CA | HA | 116.4° | 109.5° |
CA | CB | CG | 120.4° | 112.2° |
CA | CB | HB2 | 103.4° | 111.1° |
CA | CB | HB3 | 106.0° | 110.3° |
C | CA | HA | 108.6° | 108.3° |
CA | C | O | 121.2° | 125.2° |
CA | C | OXT | 43.3° | 112.0° |
CG | CB | HB2 | 103.5° | 108.6° |
CG | CB | HB3 | 106.0° | 107.5° |
CB | CG | CD1 | 121.3° | 117.2° |
CB | CG | CD2 | 116.2° | 122.8° |
HB2 | CB | HB3 | 118.5° | 107.0° |
O | C | OXT | 93.7° | 122.7° |
C | OXT | HXT | 43.3° | 114.8° |
CD1 | CG | CD2 | 122.5° | 120.0° |
CG | CD1 | OD1 | 119.7° | 122.0° |
CG | CD1 | CE1 | 119.6° | 117.7° |
CG | CD2 | CE2 | 117.1° | 122.4° |
CG | CD2 | HD2 | 121.5° | 120.7° |
OD1 | CD1 | CE1 | 120.6° | 120.3° |
CD1 | CE1 | CZ | 118.7° | 122.0° |
CD1 | CE1 | HE1 | 120.7° | 117.1° |
CZ | CE1 | HE1 | 120.6° | 121.0° |
CE1 | CZ | CE2 | 121.2° | 120.6° |
CE1 | CZ | OH | 121.4° | 120.7° |
CE2 | CD2 | HD2 | 121.5° | 116.9° |
CD2 | CE2 | NE2 | 121.9° | 122.0° |
CD2 | CE2 | CZ | 120.9° | 117.2° |
NE2 | CE2 | CZ | 117.2° | 120.8° |
CE2 | NE2 | C1 | 127.6° | 114.3° |
CE2 | CZ | OH | 117.5° | 118.7° |
NE2 | C1 | C2 | 108.2° | 109.9° |
NE2 | C1 | H11 | 110.2° | 108.3° |
NE2 | C1 | H12 | 109.9° | 109.6° |
CZ | OH | HH | 109.5° | 109.8° |
C2' | C3' | C4' | 120.0° | 120.0° |
C2' | C3' | H3' | 120.0° | 119.7° |
C3' | C2' | C1' | 119.8° | 119.4° |
C3' | C2' | H2' | 120.1° | 119.5° |
C4' | C3' | H3' | 120.0° | 120.3° |
C3' | C4' | C5' | 120.4° | 120.0° |
C3' | C4' | O1 | 120.0° | 120.0° |
C1' | C2' | H2' | 120.1° | 121.2° |
C2' | C1' | C6' | 120.7° | 121.3° |
C2' | C1' | C2 | 119.5° | 119.4° |
C6' | C1' | C2 | 119.9° | 119.4° |
C1' | C6' | C5' | 120.0° | 119.4° |
C1' | C6' | H6' | 120.0° | 121.2° |
C1' | C2 | C1 | 112.7° | 113.0° |
C1' | C2 | H21 | 107.7° | 109.8° |
C1' | C2 | H22 | 108.4° | 108.5° |
C5' | C6' | H6' | 120.0° | 119.4° |
C6' | C5' | C4' | 119.2° | 120.0° |
C6' | C5' | H5' | 120.4° | 119.7° |
C4' | C5' | H5' | 120.4° | 120.4° |
C5' | C4' | O1 | 119.5° | 120.0° |
C4' | O1 | HO1 | 109.5° | 110.3° |
C1 | C2 | H21 | 107.7° | 110.1° |
C1 | C2 | H22 | 108.4° | 109.3° |
C2 | C1 | H11 | 110.2° | 109.6° |
C2 | C1 | H12 | 109.9° | 111.7° |
H21 | C2 | H22 | 112.0° | 105.9° |
H11 | C1 | H12 | 108.4° | 107.7° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 165.9° |
N | CA | CB | C | 122.3° | 118.6° |
N | CA | CB | HA | 118.1° | 120.6° |
N | CA | C | HA | 118.4° | 117.7° |
N | CA | CB | CG | 37.9° | 179.4° |
N | CA | CB | HB2 | 152.5° | 57.5° |
N | CA | CB | HB3 | 82.2° | 60.9° |
N | CA | C | O | 29.0° | 32.2° |
N | CA | C | OXT | 28.8° | 147.5° |
H | N | CA | CB | 125.3° | 155.3° |
H | N | CA | C | 10.0° | 32.7° |
H | N | CA | HA | 110.0° | 84.2° |
H2 | N | CA | CB | 114.8° | 38.1° |
H2 | N | CA | C | 129.9° | 160.7° |
H2 | N | CA | HA | 10.0° | 82.4° |
CB | CA | C | HA | 124.7° | 121.4° |
CA | CB | CG | HB2 | 114.7° | 123.2° |
CA | CB | CG | HB3 | 120.0° | 121.4° |
CA | CB | HB2 | HB3 | 116.8° | 120.4° |
CB | CA | C | O | 87.9° | 88.6° |
CB | CA | C | OXT | 145.6° | 91.6° |
CA | CB | CG | CD1 | 86.8° | 86.8° |
CA | CB | CG | CD2 | 93.2° | 93.2° |
C | CA | CB | CG | 160.2° | 60.7° |
C | CA | CB | HB2 | 85.2° | 61.1° |
C | CA | CB | HB3 | 40.2° | 179.5° |
CA | C | O | OXT | 35.6° | 179.7° |
CA | C | OXT | HXT | 180.0° | 179.7° |
HA | CA | CB | CG | 80.3° | 60.0° |
HA | CA | CB | HB2 | 34.4° | 178.2° |
HA | CA | CB | HB3 | 159.7° | 59.7° |
HA | CA | C | O | 147.4° | 150.0° |
HA | CA | C | OXT | 89.7° | 29.8° |
CG | CB | HB2 | HB3 | 116.9° | 115.7° |
CB | CG | CD1 | CD2 | 180.0° | 179.9° |
CB | CG | CD1 | OD1 | 0.1° | 0.0° |
CB | CG | CD1 | CE1 | 180.0° | 180.0° |
CB | CG | CD2 | CE2 | 180.0° | 179.9° |
CB | CG | CD2 | HD2 | 0.1° | 0.1° |
HB2 | CB | CG | CD1 | 27.8° | 149.9° |
HB2 | CB | CG | CD2 | 152.2° | 30.0° |
HB3 | CB | CG | CD1 | 153.2° | 34.6° |
HB3 | CB | CG | CD2 | 26.8° | 145.4° |
O | C | OXT | HXT | 46.4° | 0.0° |
CG | CD1 | OD1 | CE1 | 179.9° | 180.0° |
CG | CD1 | CE1 | CZ | 0.0° | 0.0° |
CG | CD1 | CE1 | HE1 | 180.0° | 180.0° |
CD1 | CG | CD2 | CE2 | 0.1° | 0.0° |
CD1 | CG | CD2 | HD2 | 179.9° | 180.0° |
CD2 | CG | CD1 | OD1 | 180.0° | 179.9° |
CD2 | CG | CD1 | CE1 | 0.0° | 0.0° |
CG | CD2 | CE2 | HD2 | 180.0° | 180.0° |
CG | CD2 | CE2 | NE2 | 179.7° | 179.9° |
CG | CD2 | CE2 | CZ | 0.0° | 0.0° |
OD1 | CD1 | CE1 | CZ | 179.9° | 179.9° |
OD1 | CD1 | CE1 | HE1 | 0.1° | 0.0° |
CD1 | CE1 | CZ | HE1 | 180.0° | 180.0° |
CD1 | CE1 | CZ | CE2 | 0.0° | 0.0° |
CD1 | CE1 | CZ | OH | 179.8° | 180.0° |
CE1 | CZ | CE2 | CD2 | 0.0° | 0.0° |
CE1 | CZ | CE2 | NE2 | 179.7° | 179.9° |
CE1 | CZ | CE2 | OH | 179.8° | 179.9° |
CE1 | CZ | OH | HH | 92.8° | 6.7° |
HE1 | CE1 | CZ | CE2 | 180.0° | 180.0° |
HE1 | CE1 | CZ | OH | 0.2° | 0.1° |
CD2 | CE2 | NE2 | CZ | 179.7° | 179.9° |
CD2 | CE2 | NE2 | C1 | 0.1° | 0.0° |
CD2 | CE2 | CZ | OH | 179.8° | 179.9° |
HD2 | CD2 | CE2 | NE2 | 0.2° | 0.0° |
HD2 | CD2 | CE2 | CZ | 179.9° | 179.9° |
NE2 | CE2 | CZ | OH | 0.1° | 0.0° |
CE2 | NE2 | C1 | C2 | 157.2° | 179.7° |
CE2 | NE2 | C1 | H11 | 82.3° | 59.9° |
CE2 | NE2 | C1 | H12 | 37.1° | 57.2° |
CZ | CE2 | NE2 | C1 | 179.6° | 179.9° |
CE2 | CZ | OH | HH | 87.4° | 173.2° |
NE2 | C1 | C2 | C1' | 114.6° | 61.1° |
NE2 | C1 | C2 | H11 | 120.5° | 118.9° |
NE2 | C1 | C2 | H12 | 120.0° | 121.8° |
NE2 | C1 | C2 | H21 | 126.8° | 62.1° |
NE2 | C1 | C2 | H22 | 5.4° | 178.1° |
NE2 | C1 | H11 | H12 | 120.3° | 118.4° |
C2' | C3' | C4' | H3' | 180.0° | 179.9° |
C3' | C2' | C1' | H2' | 180.0° | 179.9° |
C3' | C2' | C1' | C6' | 0.1° | 0.0° |
C3' | C2' | C1' | C2 | 179.9° | 179.9° |
C2' | C3' | C4' | C5' | 0.1° | 0.1° |
C2' | C3' | C4' | O1 | 180.0° | 179.9° |
C4' | C3' | C2' | C1' | 0.1° | 0.1° |
C4' | C3' | C2' | H2' | 179.9° | 180.0° |
C3' | C4' | C5' | C6' | 0.1° | 0.1° |
C3' | C4' | C5' | O1 | 179.9° | 179.9° |
C3' | C4' | C5' | H5' | 179.9° | 179.9° |
C3' | C4' | O1 | HO1 | 63.2° | 19.8° |
H3' | C3' | C2' | C1' | 179.9° | 180.0° |
H3' | C3' | C2' | H2' | 0.1° | 0.1° |
H3' | C3' | C4' | C5' | 179.9° | 180.0° |
H3' | C3' | C4' | O1 | 0.0° | 0.1° |
C2' | C1' | C6' | C2 | 180.0° | 180.0° |
C2' | C1' | C6' | C5' | 0.1° | 0.0° |
C2' | C1' | C6' | H6' | 179.9° | 180.0° |
C2' | C1' | C2 | C1 | 100.0° | 90.0° |
C2' | C1' | C2 | H21 | 18.7° | 33.3° |
C2' | C1' | C2 | H22 | 140.0° | 148.6° |
H2' | C2' | C1' | C6' | 179.9° | 180.0° |
H2' | C2' | C1' | C2 | 0.1° | 0.0° |
C1' | C6' | C5' | H6' | 180.0° | 180.0° |
C1' | C6' | C5' | C4' | 0.1° | 0.0° |
C1' | C6' | C5' | H5' | 179.9° | 180.0° |
C6' | C1' | C2 | C1 | 80.0° | 90.0° |
C6' | C1' | C2 | H21 | 161.4° | 146.7° |
C6' | C1' | C2 | H22 | 40.0° | 31.3° |
C2 | C1' | C6' | C5' | 180.0° | 180.0° |
C2 | C1' | C6' | H6' | 0.1° | 0.0° |
C1' | C2 | C1 | H21 | 118.6° | 123.2° |
C1' | C2 | C1 | H22 | 120.0° | 120.9° |
C1' | C2 | H21 | H22 | 119.1° | 116.9° |
C1' | C2 | C1 | H11 | 124.9° | 180.0° |
C1' | C2 | C1 | H12 | 5.4° | 60.8° |
C6' | C5' | C4' | H5' | 180.0° | 180.0° |
C6' | C5' | C4' | O1 | 180.0° | 179.9° |
H6' | C6' | C5' | C4' | 179.9° | 180.0° |
H6' | C6' | C5' | H5' | 0.1° | 0.0° |
C5' | C4' | O1 | HO1 | 116.9° | 160.1° |
H5' | C5' | C4' | O1 | 0.0° | 0.1° |
C1 | C2 | H21 | H22 | 119.1° | 118.0° |
C2 | C1 | H11 | H12 | 120.4° | 121.7° |
H21 | C2 | C1 | H11 | 6.3° | 56.8° |
H21 | C2 | C1 | H12 | 113.2° | 176.1° |
H22 | C2 | C1 | H11 | 115.1° | 59.1° |
H22 | C2 | C1 | H12 | 125.4° | 60.1° |