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TT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
PO1Psing1.62Å1.50Å
PO2Pdoub1.50Å1.50Å
PO5'sing1.62Å1.60Å
POXTsing1.62Å1.60Å
O1PH1Psing0.98Å0.95Å
O5'C5'sing1.42Å1.42Å
C5'C4'sing1.52Å1.51Å
C5'H5'1sing1.09Å1.12Å
C5'H5'2sing1.09Å1.12Å
C4'O4'sing1.45Å1.47Å
C4'C3'sing1.53Å1.54Å
C4'H4'sing1.10Å1.12Å
O4'C1'sing1.44Å1.43Å
C3'O3'sing1.43Å1.44Å
C3'C2'sing1.52Å1.51Å
C3'H3'sing1.09Å1.12Å
O3'C7sing1.42Å1.38Å
C2'C1'sing1.52Å1.53Å
C2'H2'1sing1.10Å1.12Å
C2'H2'2sing1.09Å1.12Å
C1'N1sing1.47Å1.50Å
C1'H1'sing1.09Å1.12Å
N1C2sing1.41Å1.39Å
N1C6sing1.51Å1.40Å
C2O2doub1.23Å1.22Å
C2N3sing1.40Å1.39Å
N3C4sing1.39Å1.39Å
N3H3sing1.02Å1.02Å
C4O4doub1.24Å1.26Å
C4C5sing1.52Å1.47Å
C5C5Asing1.54Å1.50Å
C5C6sing1.55Å1.32Å
C5C5Tsing1.56Å1.55Å
C5AH5A1sing1.09Å1.12Å
C5AH5A2sing1.09Å1.12Å
C5AH5A3sing1.09Å1.12Å
C6C6Tsing1.56Å1.65Å
C6H6sing1.10Å1.12Å
C7O5Rsing1.43Å1.41Å
C7H7C1sing1.10Å1.12Å
C7H7C2sing1.10Å1.12Å
O5RC5Rsing1.43Å1.42Å
C5RC4Rsing1.53Å1.51Å
C5RH5R1sing1.10Å1.11Å
C5RH5R2sing1.09Å1.11Å
C4RO4Rsing1.45Å1.46Å
C4RC3Rsing1.52Å1.51Å
C4RH4Rsing1.10Å1.12Å
O4RC1Rsing1.44Å1.41Å
C3RO3Rsing1.43Å1.40Å
C3RC2Rsing1.51Å1.52Å
C3RH3Rsing1.09Å1.12Å
O3RHAsing0.97Å0.95Å
C2RC1Rsing1.52Å1.51Å
C2RH2R1sing1.10Å1.12Å
C2RH2R2sing1.09Å1.11Å
C1RN1Tsing1.47Å1.43Å
C1RH1Rsing1.10Å1.11Å
N1TC2Tsing1.41Å1.40Å
N1TC6Tsing1.48Å1.39Å
C2TO2Tdoub1.23Å1.26Å
C2TN3Tsing1.40Å1.35Å
N3TC4Tsing1.39Å1.39Å
N3TH3Tsing1.02Å1.02Å
C4TO4Tdoub1.24Å1.22Å
C4TC5Tsing1.54Å1.45Å
C5MC5Tsing1.52Å1.50Å
C5MH5M1sing1.09Å1.12Å
C5MH5M2sing1.09Å1.12Å
C5MH5M3sing1.09Å1.12Å
C6TC5Tsing1.54Å1.31Å
C6TH6Tsing1.10Å1.12Å
OXTHXTsing0.98Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1PPO2P119.9°115.3°
O1PPO5'110.5°103.7°
O1PPOXT104.3°103.3°
PO1PH1P109.5°119.0°
O2PPO5'115.3°115.0°
O2PPOXT102.5°115.0°
O5'POXT101.4°103.0°
PO5'C5'121.1°118.5°
POXTHXT109.5°119.0°
O5'C5'C4'109.3°108.6°
O5'C5'H5'1112.2°109.3°
O5'C5'H5'2112.3°109.3°
C4'C5'H5'1112.3°110.0°
C4'C5'H5'2112.3°110.0°
C5'C4'O4'109.3°109.2°
C5'C4'C3'112.4°112.8°
C5'C4'H4'106.5°108.6°
H5'1C5'H5'298.2°109.7°
O4'C4'C3'105.8°106.5°
O4'C4'H4'113.0°107.3°
C4'O4'C1'109.7°109.0°
C3'C4'H4'109.9°112.1°
C4'C3'O3'110.7°105.6°
C4'C3'C2'101.8°101.9°
C4'C3'H3'114.6°113.1°
O4'C1'C2'105.9°106.2°
O4'C1'N1110.6°112.5°
O4'C1'H1'113.4°106.2°
O3'C3'C2'112.3°114.6°
O3'C3'H3'104.5°108.3°
C3'O3'C7116.5°116.0°
C2'C3'H3'113.1°113.2°
C3'C2'C1'103.2°102.1°
C3'C2'H2'1114.6°109.3°
C3'C2'H2'2114.6°115.6°
O3'C7O5R110.5°110.7°
O3'C7H7C1111.8°108.5°
O3'C7H7C2111.8°111.7°
C1'C2'H2'1114.6°110.6°
C1'C2'H2'2114.6°111.5°
C2'C1'N1115.4°113.6°
C2'C1'H1'108.3°109.4°
H2'1C2'H2'295.9°107.6°
N1C1'H1'103.5°108.6°
C1'N1C2119.3°119.1°
C1'N1C6120.2°116.4°
C2N1C6120.3°122.4°
N1C2O2123.1°124.5°
N1C2N3114.8°116.8°
N1C6C5124.0°113.5°
N1C6C6T115.1°120.3°
N1C6H690.8°109.7°
O2C2N3122.1°118.7°
C2N3C4127.5°129.9°
C2N3H3116.0°115.0°
C4N3H3116.5°115.1°
N3C4O4120.5°121.9°
N3C4C5114.1°114.3°
O4C4C5125.4°123.8°
C4C5C5A105.5°109.6°
C4C5C6118.9°118.5°
C4C5C5T117.7°118.5°
C5AC5C6111.3°107.4°
C5AC5C5T105.3°113.3°
C5C5AH5A1111.5°110.8°
C5C5AH5A2111.5°110.6°
C5C5AH5A3111.3°110.3°
C6C5C5T97.4°87.9°
C5C6C6T79.0°86.1°
C5C6H6122.1°112.7°
C5C5TC4T115.0°119.4°
C5C5TC5M116.4°113.2°
C5C5TC6T83.1°86.5°
H5A1C5AH5A298.8°108.4°
H5A1C5AH5A3111.5°108.3°
H5A2C5AH5A3111.6°108.4°
C6TC6H6130.1°112.8°
C6C6TN1T126.5°119.6°
C6C6TC5T92.9°88.4°
C6C6TH6T115.5°112.2°
O5RC7H7C1111.8°109.7°
O5RC7H7C2111.8°109.0°
C7O5RC5R113.6°111.6°
H7C1C7H7C298.6°107.0°
O5RC5RC4R109.7°110.8°
O5RC5RH5R1112.1°110.2°
O5RC5RH5R2112.1°108.0°
C4RC5RH5R1112.2°108.9°
C4RC5RH5R2112.1°110.1°
C5RC4RO4R121.6°107.9°
C5RC4RC3R105.9°114.8°
C5RC4RH4R101.9°108.7°
H5R1C5RH5R298.3°108.9°
O4RC4RC3R103.1°106.9°
O4RC4RH4R104.8°106.8°
C4RO4RC1R106.4°108.5°
C3RC4RH4R120.8°111.4°
C4RC3RO3R100.2°109.5°
C4RC3RC2R104.0°103.6°
C4RC3RH3R117.9°114.3°
O4RC1RC2R109.8°103.7°
O4RC1RN1T112.5°110.6°
O4RC1RH1R117.8°107.1°
O3RC3RC2R108.1°108.3°
O3RC3RH3R114.3°107.4°
C3RO3RHA100.2°106.5°
C2RC3RH3R111.1°113.6°
C3RC2RC1R93.6°102.1°
C3RC2RH2R1118.4°109.3°
C3RC2RH2R2118.4°113.3°
C1RC2RH2R1118.5°110.7°
C1RC2RH2R2118.5°112.1°
C2RC1RN1T126.9°117.5°
C2RC1RH1R95.8°110.6°
H2R1C2RH2R291.8°109.2°
N1TC1RH1R91.6°106.9°
C1RN1TC2T114.7°117.6°
C1RN1TC6T120.2°118.9°
C2TN1TC6T124.6°122.7°
N1TC2TO2T125.9°123.7°
N1TC2TN3T111.9°116.3°
N1TC6TC5T121.0°115.4°
N1TC6TH6T82.3°110.9°
O2TC2TN3T122.2°120.0°
C2TN3TC4T126.0°129.5°
C2TN3TH3T115.2°115.1°
C4TN3TH3T118.8°115.1°
N3TC4TO4T119.7°121.5°
N3TC4TC5T117.7°114.3°
O4TC4TC5T122.6°124.1°
C4TC5TC5M105.9°109.1°
C4TC5TC6T117.4°116.7°
C5TC5MH5M1109.7°110.5°
C5TC5MH5M2109.7°110.3°
C5TC5MH5M3116.4°111.0°
C5MC5TC6T118.3°110.2°
H5M1C5MH5M2100.5°108.3°
H5M1C5MH5M3109.7°108.3°
H5M2C5MH5M3109.7°108.4°
C5TC6TH6T121.8°108.2°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1PPO2PO5'135.9°120.7°
O1PPO2POXT114.9°120.0°
O1PPO5'OXT110.2°107.4°
O1PPO5'C5'177.1°53.2°
O1PPOXTHXT161.2°78.5°
O2PPO5'OXT109.9°125.8°
O2PPO1PH1P140.0°48.8°
O2PPO5'C5'43.0°180.0°
O2PPOXTHXT73.1°48.0°
O5'PO1PH1P82.2°175.4°
PO5'C5'C4'123.2°180.0°
PO5'C5'H5'12.1°60.1°
PO5'C5'H5'2111.6°60.0°
O5'POXTHXT46.4°173.8°
OXTPO1PH1P26.1°77.5°
OXTPO5'C5'66.9°54.2°
O5'C5'C4'H5'1125.2°119.5°
O5'C5'C4'H5'2125.3°119.5°
O5'C5'H5'1H5'2118.2°119.8°
O5'C5'C4'O4'156.1°61.3°
O5'C5'C4'C3'38.9°179.5°
O5'C5'C4'H4'81.6°55.5°
C4'C5'H5'1H5'2118.2°121.1°
C5'C4'O4'C3'121.2°122.1°
C5'C4'O4'H4'118.4°117.6°
C5'C4'C3'H4'118.5°123.1°
C5'C4'O4'C1'110.7°113.8°
C5'C4'C3'O3'150.6°148.9°
C5'C4'C3'C2'89.8°91.1°
C5'C4'C3'H3'32.7°30.7°
H5'1C5'C4'O4'30.8°58.3°
H5'1C5'C4'C3'86.3°60.0°
H5'1C5'C4'H4'153.2°175.0°
H5'2C5'C4'O4'78.7°179.2°
H5'2C5'C4'C3'164.2°60.9°
H5'2C5'C4'H4'43.7°64.0°
O4'C4'C3'H4'122.3°117.1°
O4'C4'C3'O3'90.2°91.3°
O4'C4'C3'C2'29.4°28.7°
O4'C4'C3'H3'151.9°150.5°
C4'O4'C1'C2'12.8°15.7°
C4'O4'C1'N1138.4°140.6°
C4'O4'C1'H1'105.9°100.7°
C3'C4'O4'C1'10.5°8.4°
C4'C3'O3'C2'113.0°111.3°
C4'C3'O3'H3'123.9°121.4°
C4'C3'C2'H3'123.5°121.7°
C4'C3'O3'C7172.0°167.3°
C4'C3'C2'C1'36.3°36.9°
C4'C3'C2'H2'1161.6°80.2°
C4'C3'C2'H2'289.0°158.2°
H4'C4'O4'C1'130.9°128.6°
H4'C4'C3'O3'32.1°25.8°
H4'C4'C3'C2'151.7°145.8°
H4'C4'C3'H3'85.8°92.3°
O4'C1'C2'C3'31.3°33.3°
O4'C1'C2'N1122.6°124.2°
O4'C1'C2'H1'122.0°114.2°
O4'C1'C2'H2'1156.6°83.0°
O4'C1'C2'H2'294.0°157.3°
O4'C1'N1H1'121.7°117.3°
O4'C1'N1C259.8°39.4°
O4'C1'N1C6124.7°156.7°
O3'C3'C2'H3'118.1°124.8°
O3'C3'C2'C1'82.1°76.6°
O3'C3'C2'H2'143.1°166.3°
O3'C3'C2'H2'2152.6°44.7°
C3'O3'C7O5R86.8°104.7°
C3'O3'C7H7C1147.9°134.8°
C3'O3'C7H7C238.5°17.0°
C2'C3'O3'C759.0°56.0°
C3'C2'C1'H2'1125.3°116.3°
C3'C2'C1'H2'2125.3°124.0°
C3'C2'H2'1H2'2120.5°126.3°
C3'C2'C1'N1153.9°157.5°
C3'C2'C1'H1'90.7°80.9°
H3'C3'O3'C764.1°71.3°
H3'C3'C2'C1'159.8°158.7°
H3'C3'C2'H2'174.9°41.5°
H3'C3'C2'H2'234.5°80.1°
O3'C7O5RH7C1125.3°119.8°
O3'C7O5RH7C2125.3°123.3°
O3'C7H7C1H7C2117.7°120.8°
O3'C7O5RC5R38.9°74.8°
C1'C2'H2'1H2'2120.5°122.0°
C2'C1'N1H1'118.2°122.0°
C2'C1'N1C2179.9°81.2°
C2'C1'N1C64.6°82.6°
H2'1C2'C1'N180.8°41.2°
H2'1C2'C1'H1'34.6°162.8°
H2'2C2'C1'N128.7°78.5°
H2'2C2'C1'H1'144.1°43.1°
C1'N1C2C6175.5°162.9°
C1'N1C2O21.1°9.4°
C1'N1C2N3179.5°170.7°
C1'N1C6C5176.6°174.7°
C1'N1C6C6T89.8°75.1°
C1'N1C6H646.1°58.3°
H1'C1'N1C262.0°156.7°
H1'C1'N1C6113.6°39.4°
N1C2O2N3179.4°179.9°
N1C2N3C40.8°5.4°
N1C2N3H3179.2°177.7°
C2N1C6C57.9°22.0°
C2N1C6C6T85.7°121.6°
C2N1C6H6138.4°105.0°
C6N1C2O2174.5°172.3°
C6N1C2N35.0°7.8°
N1C6C5C44.4°24.7°
N1C6C5C5A118.5°149.5°
N1C6C5C6T113.0°121.4°
N1C6C5H6116.3°125.4°
N1C6C5C5T131.8°96.8°
N1C6C6TH6114.5°132.0°
N1C6C6TN1T11.9°28.7°
N1C6C6TC5T144.7°89.9°
N1C6C6TH6T87.8°161.0°
O2C2N3C4179.7°174.5°
O2C2N3H30.3°2.4°
C2N3C4H3180.0°176.9°
C2N3C4O4175.6°178.0°
C2N3C4C53.9°1.7°
N3C4O4C5179.5°179.7°
N3C4C5C5A127.0°137.8°
N3C4C5C61.2°14.1°
N3C4C5C5T115.9°90.1°
H3N3C4O44.4°1.1°
H3N3C4C5176.1°178.7°
O4C4C5C5A52.5°42.5°
O4C4C5C6178.3°166.1°
O4C4C5C5T64.6°89.6°
C4C5C5AC6130.3°129.9°
C4C5C5AC5T125.2°134.8°
C4C5C6C5T127.4°121.5°
C4C5C5AH5A1175.0°124.9°
C4C5C5AH5A275.6°114.9°
C4C5C5AH5A349.7°4.9°
C4C5C6C6T108.6°146.2°
C4C5C6H6120.7°100.7°
C4C5C5TC4T12.5°27.7°
C4C5C5TC5M137.1°102.9°
C4C5C5TC6T104.6°146.5°
C5AC5C6C5T109.7°113.8°
C5C5AH5A1H5A2117.4°121.5°
C5C5AH5A1H5A3125.1°121.1°
C5C5AH5A2H5A3125.2°121.0°
C5AC5C6C6T128.5°89.1°
C5AC5C6H62.2°24.1°
C5AC5C5TC4T104.7°158.2°
C5AC5C5TC5M19.9°27.5°
C5AC5C5TC6T138.2°83.0°
C6C5C5AH5A154.7°5.1°
C6C5C5AH5A254.7°115.2°
C6C5C5AH5A3180.0°125.0°
C5C6C6TH6122.9°113.0°
C5C6C6TN1T110.6°143.6°
C6C5C5TC4T140.7°93.8°
C6C5C5TC5M94.7°135.6°
C6C5C5TC6T23.6°25.1°
C5C6C6TH6T149.7°84.0°
C5TC5C5AH5A149.7°100.4°
C5TC5C5AH5A2159.2°19.9°
C5TC5C5AH5A375.5°139.7°
C5TC5C6H6111.9°137.8°
C5C5TC6TN1T117.9°147.2°
C5C5TC4TN3T89.0°117.7°
C5C5TC4TO4T90.6°63.7°
C5C5TC4TC5M130.0°132.4°
C5C5TC4TC6T95.3°101.8°
C5C5TC5MC6T96.6°95.0°
C5C5TC5MH5M154.7°141.6°
C5C5TC5MH5M254.8°21.9°
C5C5TC5MH5M3180.0°98.2°
C5C5TC6TH6T141.1°88.0°
H5A1C5AH5A2H5A3117.4°117.4°
C6C6TN1TC1R79.5°105.2°
C6C6TN1TC2T108.9°85.1°
C6C6TN1TC5T121.2°103.5°
C6C6TN1TH6T116.1°133.0°
C6C6TC5TC4T133.2°96.5°
C6C6TC5TC5M97.7°138.4°
C6C6TC5TH6T122.6°112.9°
H6C6C6TN1T126.5°103.4°
H6C6C6TC5T100.8°138.1°
H6C6C6TH6T26.8°29.0°
O5RC7H7C1H7C2117.7°118.2°
C7O5RC5RC4R169.4°158.9°
C7O5RC5RH5R144.1°38.4°
C7O5RC5RH5R265.4°80.4°
H7C1C7O5RC5R86.4°45.0°
H7C2C7O5RC5R164.1°161.9°
O5RC5RC4RH5R1125.3°121.3°
O5RC5RC4RH5R2125.3°119.4°
O5RC5RH5R1H5R2118.1°118.2°
O5RC5RC4RO4R94.7°70.6°
O5RC5RC4RC3R22.2°48.4°
O5RC5RC4RH4R149.4°173.9°
C4RC5RH5R1H5R2118.0°120.1°
C5RC4RO4RC3R118.3°124.0°
C5RC4RO4RH4R114.5°116.7°
C5RC4RC3RH4R114.9°124.1°
C5RC4RO4RC1R109.6°134.2°
C5RC4RC3RO3R155.5°139.9°
C5RC4RC3RC2R92.8°104.8°
C5RC4RC3RH3R30.8°19.3°
H5R1C5RC4RO4R30.6°50.7°
H5R1C5RC4RC3R147.5°169.8°
H5R1C5RC4RH4R85.3°64.8°
H5R2C5RC4RO4R140.1°170.0°
H5R2C5RC4RC3R103.1°70.9°
H5R2C5RC4RH4R24.2°54.5°
O4RC4RC3RH4R116.4°116.3°
O4RC4RC3RO3R75.8°100.5°
O4RC4RC3RC2R36.0°14.8°
O4RC4RC3RH3R159.5°139.0°
C4RO4RC1RC2R22.3°31.0°
C4RO4RC1RN1T169.5°157.9°
C4RO4RC1RH1R85.9°86.0°
C3RC4RO4RC1R8.7°10.2°
C4RC3RO3RC2R108.5°112.3°
C4RC3RO3RH3R127.1°124.7°
C4RC3RC2RH3R127.9°124.6°
C4RC3RO3RHA180.0°142.3°
C4RC3RC2RC1R45.4°32.5°
C4RC3RC2RH2R1170.7°84.7°
C4RC3RC2RH2R279.9°153.3°
H4RC4RO4RC1R136.0°109.1°
H4RC4RC3RO3R40.6°15.8°
H4RC4RC3RC2R152.3°131.1°
H4RC4RC3RH3R84.1°104.7°
O4RC1RC2RC3R42.1°39.3°
O4RC1RC2RN1T141.1°122.4°
O4RC1RC2RH1R122.4°114.5°
O4RC1RC2RH2R1167.4°76.9°
O4RC1RC2RH2R283.1°160.9°
O4RC1RN1TH1R121.2°116.2°
O4RC1RN1TC2T90.8°58.4°
O4RC1RN1TC6T96.8°131.4°
O3RC3RC2RH3R126.3°119.2°
O3RC3RC2RC1R60.4°83.8°
O3RC3RC2RH2R164.8°159.0°
O3RC3RC2RH2R2174.3°37.1°
C2RC3RO3RHA71.5°105.4°
C3RC2RC1RH2R1125.3°116.2°
C3RC2RC1RH2R2125.2°121.6°
C3RC2RH2R1H2R2123.9°124.5°
C3RC2RC1RN1T176.8°161.7°
C3RC2RC1RH1R80.3°75.2°
H3RC3RO3RHA52.9°17.6°
H3RC3RC2RC1R173.3°157.1°
H3RC3RC2RH2R161.4°39.8°
H3RC3RC2RH2R248.0°82.1°
C1RC2RH2R1H2R2124.0°123.9°
C2RC1RN1TH1R98.5°125.0°
C2RC1RN1TC2T128.8°177.2°
C2RC1RN1TC6T43.6°12.6°
H2R1C2RC1RN1T51.5°45.5°
H2R1C2RC1RH1R45.0°168.6°
H2R2C2RC1RN1T58.0°76.7°
H2R2C2RC1RH1R154.4°46.4°
C1RN1TC2TC6T172.0°169.8°
C1RN1TC2TO2T17.7°9.3°
C1RN1TC2TN3T162.1°169.5°
C1RN1TC6TC5T159.2°151.3°
C1RN1TC6TH6T36.6°27.8°
H1RC1RN1TC2T30.3°57.8°
H1RC1RN1TC6T142.1°112.4°
N1TC2TO2TN3T179.7°178.8°
N1TC2TN3TC4T0.7°11.9°
N1TC2TN3TH3T179.3°174.9°
C2TN1TC6TC5T12.4°18.4°
C2TN1TC6TH6T135.0°141.9°
C6TN1TC2TO2T170.3°179.1°
C6TN1TC2TN3T9.9°0.3°
N1TC6TC5TC4T3.3°25.8°
N1TC6TC5TC5M125.7°99.4°
N1TC6TC5TH6T100.9°124.9°
O2TC2TN3TC4T179.0°166.9°
O2TC2TN3TH3T0.9°6.2°
C2TN3TC4TH3T180.0°173.1°
C2TN3TC4TO4T171.8°175.2°
C2TN3TC4TC5T8.7°3.4°
N3TC4TO4TC5T179.5°178.5°
N3TC4TC5TC5M141.1°109.8°
N3TC4TC5TC6T6.4°15.9°
H3TN3TC4TO4T8.2°2.1°
H3TN3TC4TC5T171.3°176.6°
O4TC4TC5TC5M39.4°68.8°
O4TC4TC5TC6T174.1°165.5°
C4TC5TC5MC6T134.2°129.4°
C4TC5TC5MH5M1176.1°6.0°
C4TC5TC5MH5M274.5°113.8°
C4TC5TC5MH5M350.8°126.1°
C4TC5TC6TH6T104.2°150.7°
C5TC5MH5M1H5M2115.5°120.9°
C5TC5MH5M1H5M3129.0°121.7°
C5TC5MH5M2H5M3129.0°121.7°
C5MC5TC6TH6T24.8°25.5°
H5M1C5MH5M2H5M3115.5°117.3°
H5M1C5MC5TC6T41.9°123.4°
H5M2C5MC5TC6T151.4°116.9°
H5M3C5MC5TC6T83.4°3.2°

218196

PDB entries from 2024-04-10

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