Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

TRV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C1sing1.43Å1.42Å
C8NC7Nsing1.53Å1.54Å
C1C2sing1.53Å1.54Å
C7NC6Nsing1.53Å1.50Å
C6NC5Nsing1.53Å1.54Å
C5NC4Nsing1.53Å1.53Å
C2NC3Nsing1.53Å1.54Å
C2NC1Nsing1.51Å1.51Å
O5C2sing1.44Å1.45Å
O5C5sing1.45Å1.44Å
C4NC3Nsing1.53Å1.53Å
C2O2sing1.43Å1.48Å
C2C3sing1.54Å1.58Å
O6C1Nsing1.34Å1.38Å
O6C6sing1.45Å1.46Å
C1NO1Ndoub1.21Å1.21Å
C5C6sing1.53Å1.51Å
C5C4sing1.55Å1.51Å
C3O3sing1.43Å1.42Å
C3C4sing1.55Å1.50Å
C4O4sing1.43Å1.44Å
C1H11sing1.09Å1.10Å
C1H12sing1.09Å1.10Å
C3H3sing1.09Å1.10Å
C4H4sing1.09Å1.10Å
C5H5sing1.09Å1.10Å
C6H61sing1.09Å1.10Å
C6H62sing1.09Å1.10Å
O1HO1sing0.97Å0.95Å
O3HO3sing0.97Å0.95Å
O4HO4sing0.97Å0.95Å
C2NH22sing1.09Å1.10Å
C2NH23sing1.09Å1.10Å
C3NH24sing1.09Å1.10Å
C3NH25sing1.09Å1.10Å
C4NH26sing1.09Å1.10Å
C4NH27sing1.09Å1.10Å
C5NH28sing1.09Å1.10Å
C5NH29sing1.09Å1.10Å
C6NH30sing1.09Å1.10Å
C6NH31sing1.09Å1.10Å
C7NH32sing1.09Å1.10Å
C7NH33sing1.09Å1.10Å
C8NH34sing1.09Å1.10Å
C8NH35sing1.09Å1.10Å
C8NH36sing1.09Å1.10Å
O2HO2sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2111.2°109.5°
O1C1H11109.1°109.4°
O1C1H12109.1°109.5°
C1O1HO1109.5°114.0°
C8NC7NC6N113.1°109.5°
C8NC7NH32108.6°109.4°
C8NC7NH33108.6°109.5°
C7NC8NH34109.5°109.5°
C7NC8NH35109.5°109.5°
C7NC8NH36109.4°109.5°
C1C2O5111.9°109.9°
C1C2O2108.9°109.8°
C1C2C3115.5°109.9°
C2C1H11109.0°109.4°
C2C1H12109.1°109.5°
C7NC6NC5N111.9°109.5°
C7NC6NH30108.9°109.5°
C7NC6NH31108.9°109.5°
C6NC7NH32108.5°109.4°
C6NC7NH33108.5°109.5°
C6NC5NC4N114.4°109.4°
C6NC5NH28108.2°109.5°
C6NC5NH29108.2°109.4°
C5NC6NH30108.9°109.5°
C5NC6NH31108.8°109.5°
C5NC4NC3N107.9°109.4°
C5NC4NH26109.9°109.5°
C5NC4NH27109.9°109.4°
C4NC5NH28108.2°109.5°
C4NC5NH29108.2°109.5°
C3NC2NC1N104.7°109.5°
C2NC3NC4N118.7°109.4°
C3NC2NH22110.7°109.4°
C3NC2NH23110.6°109.5°
C2NC3NH24107.1°109.4°
C2NC3NH25107.1°109.4°
C2NC1NO6117.0°120.0°
C2NC1NO1N122.3°120.0°
C1NC2NH22110.7°109.4°
C1NC2NH23110.6°109.5°
C2O5C5107.7°106.8°
O5C2O2111.2°109.9°
O5C2C3104.2°107.5°
O5C5C6115.7°110.6°
O5C5C4106.0°103.5°
O5C5H5105.3°110.7°
C4NC3NH24107.1°109.6°
C4NC3NH25107.1°109.5°
C3NC4NH26109.9°109.5°
C3NC4NH27109.8°109.5°
O2C2C3104.9°109.9°
C2O2HO2109.5°114.0°
C2C3O3112.8°110.5°
C2C3C4102.1°104.2°
C2C3H3109.3°110.5°
C1NO6C6107.7°117.0°
O6C1NO1N120.2°120.0°
O6C6C5123.5°109.5°
O6C6H61105.9°109.5°
O6C6H62105.8°109.5°
C6C5C4119.2°110.7°
C6C5H5104.6°110.6°
C5C6H61105.9°109.5°
C5C6H62105.9°109.4°
C5C4C398.2°102.1°
C5C4O4110.4°110.9°
C5C4H4112.3°110.9°
C4C5H5104.6°110.6°
O3C3C4110.4°110.5°
O3C3H3111.6°110.5°
C3O3HO3109.5°114.0°
C3C4O4109.3°110.9°
C4C3H3110.3°110.6°
C3C4H4112.3°110.9°
O4C4H4113.4°110.8°
C4O4HO4109.5°114.0°
H11C1H12109.5°109.5°
H61C6H62109.5°109.5°
H22C2NH23109.5°109.5°
H24C3NH25109.5°109.4°
H26C4NH27109.5°109.5°
H28C5NH29109.5°109.5°
H30C6NH31109.5°109.4°
H32C7NH33109.4°109.5°
H34C8NH35109.5°109.4°
H34C8NH36109.5°109.5°
H35C8NH36109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2H11120.2°120.0°
O1C1C2H12120.3°120.0°
O1C1C2O556.8°61.7°
O1C1C2O2179.9°59.3°
O1C1C2C362.2°179.7°
O1C1H11H12119.2°120.0°
C8NC7NC6NH32120.6°120.0°
C8NC7NC6NH33120.6°120.0°
C8NC7NC6NC5N179.9°180.0°
C8NC7NC6NH3059.6°60.0°
C8NC7NC6NH3159.7°60.0°
C8NC7NH32H33118.3°120.0°
C7NC8NH34H35120.0°120.0°
C7NC8NH34H36120.0°120.1°
C7NC8NH35H36120.0°120.1°
C1C2O5O2122.1°121.0°
C1C2O5C3125.4°119.5°
C1C2O5C5125.6°93.0°
C1C2O2C3124.2°121.0°
C1C2C3O390.3°123.9°
C1C2C3C4151.3°117.4°
C2C1H11H12119.2°120.0°
C1C2C3H334.5°1.4°
C2C1O1HO1180.0°180.0°
C1C2O2HO2180.0°59.3°
C7NC6NC5NH30120.4°120.0°
C7NC6NC5NH31120.4°120.0°
C7NC6NC5NC4N178.0°180.0°
C7NC6NC5NH2857.2°60.0°
C7NC6NC5NH2961.3°60.0°
C7NC6NH30H31118.9°120.0°
C6NC7NH32H33118.3°120.0°
C6NC7NC8NH34180.0°60.0°
C6NC7NC8NH3560.0°60.0°
C6NC7NC8NH3660.0°180.0°
C6NC5NC4NH28120.7°120.0°
C6NC5NC4NH29120.7°119.9°
C6NC5NC4NC3N175.2°180.0°
C6NC5NC4NH2665.1°60.0°
C6NC5NC4NH2755.4°60.0°
C6NC5NH28H29117.7°120.0°
C5NC6NH30H31118.9°120.0°
C5NC6NC7NH3259.5°60.0°
C5NC6NC7NH3359.4°60.0°
C5NC4NC3NC2N142.1°180.0°
C5NC4NC3NH26119.8°120.0°
C5NC4NC3NH27119.8°119.9°
C5NC4NC3NH2420.8°60.0°
C5NC4NC3NH2596.6°60.1°
C5NC4NH26H27120.8°120.0°
C4NC5NH28H29117.7°120.0°
C4NC5NC6NH3061.7°60.0°
C4NC5NC6NH3157.6°60.0°
C3NC2NC1NH22119.3°120.0°
C3NC2NC1NH23119.2°120.0°
C2NC3NC4NH24121.3°120.0°
C2NC3NC4NH25121.3°120.0°
C3NC2NC1NO6110.2°180.0°
C3NC2NC1NO1N77.7°0.1°
C3NC2NH22H23122.2°120.0°
C2NC3NH24H25115.8°119.9°
C2NC3NC4NH2622.4°60.0°
C2NC3NC4NH2798.1°60.1°
C1NC2NC3NC4N153.5°180.0°
C2NC1NO6O1N172.3°179.9°
C2NC1NO6C6173.5°180.0°
C1NC2NH22H23122.2°120.0°
C1NC2NC3NH2485.2°60.0°
C1NC2NC3NH2532.2°59.9°
O5C2O2C3112.1°118.0°
C2O5C5C6162.8°158.6°
C2O5C5C428.3°40.0°
O5C2C3O3146.6°116.5°
O5C2C3C428.1°2.1°
O5C2C1H11177.0°178.3°
O5C2C1H1263.5°58.3°
O5C2C3H388.7°120.9°
C2O5C5H582.2°78.5°
O5C2O2HO256.2°61.7°
C5O5C2O2112.3°146.1°
C5O5C2C30.2°26.5°
O5C5C6O648.6°70.9°
O5C5C6C4128.3°114.1°
O5C5C6H5115.4°123.0°
O5C5C4H5111.0°118.6°
O5C5C4C345.0°37.0°
O5C5C4O4159.2°155.3°
O5C5C4H473.2°81.2°
O5C5C6H6173.3°169.1°
O5C5C6H62170.5°49.1°
C4NC3NC2NH2287.3°60.0°
C4NC3NC2NH2334.2°60.0°
C4NC3NH24H25115.8°120.1°
C3NC4NH26H27120.7°120.1°
C3NC4NC5NH2854.4°60.0°
C3NC4NC5NH2964.1°60.1°
O2C2C3O329.6°3.0°
O2C2C3C488.8°121.7°
O2C2C1H1159.7°60.7°
O2C2C1H1259.8°179.3°
O2C2C3H3154.4°119.6°
C2C3C4C543.0°20.8°
C2C3O3C4113.4°114.8°
C2C3O3H3123.5°122.6°
C2C3C4H3116.1°118.7°
C2C3C4O4158.0°139.1°
C3C2C1H1158.0°60.3°
C3C2C1H12177.5°59.7°
C2C3C4H475.3°97.4°
C2C3O3HO3180.0°180.0°
C3C2O2HO255.8°179.7°
C1NO6C6C5157.2°180.0°
C1NO6C6H6135.3°60.0°
C1NO6C6H6280.9°60.0°
O6C1NC2NH229.0°60.1°
O6C1NC2NH23130.5°60.0°
C6O6C1NO1N1.2°0.0°
O6C6C5H61121.9°120.0°
O6C6C5H62121.9°120.0°
O6C6C5C4176.9°175.0°
O6C6C5H566.7°52.1°
O6C6H61H62113.7°120.0°
O1NC1NC2NH22163.1°120.0°
O1NC1NC2NH2341.6°120.0°
C6C5C4H5116.4°122.9°
C6C5C4C3177.6°155.5°
C6C5C4O468.2°86.2°
C6C5C4H459.4°37.3°
C5C6H61H62113.7°119.9°
C5C4C3O3163.1°139.5°
C5C4C3O4115.1°118.3°
C5C4C3H4118.2°118.2°
C5C4O4H4127.0°123.6°
C5C4C3H373.2°97.9°
C4C5C6H6155.0°55.0°
C4C5C6H6261.2°65.0°
C5C4O4HO4180.0°174.2°
O3C3C4H3123.8°122.6°
O3C3C4O481.9°102.2°
O3C3C4H444.8°21.3°
C3C4O4H4126.1°123.6°
C3C4C5H566.0°81.6°
C4C3O3HO366.6°65.2°
C3C4O4HO473.1°61.4°
O4C4C3H341.9°20.4°
O4C4C5H548.2°36.6°
H11C1O1HO159.7°60.0°
H12C1O1HO159.8°60.0°
H3C3C4H4168.6°143.9°
H3C3O3HO356.5°57.4°
H4C4C5H5175.8°160.2°
H4C4O4HO453.0°62.2°
H5C5C6H61171.3°67.9°
H5C5C6H6255.1°172.2°
H22C2NC3NH2434.1°179.9°
H22C2NC3NH25151.4°60.0°
H23C2NC3NH24155.6°60.1°
H23C2NC3NH2587.0°180.0°
H24C3NC4NH2698.9°180.0°
H24C3NC4NH27140.6°59.9°
H25C3NC4NH26143.7°60.0°
H25C3NC4NH2723.2°180.0°
H26C4NC5NH28174.2°180.0°
H26C4NC5NH2955.6°59.9°
H27C4NC5NH2865.3°60.0°
H27C4NC5NH29176.1°180.0°
H28C5NC6NH30177.6°180.0°
H28C5NC6NH3163.2°60.0°
H29C5NC6NH3059.0°60.0°
H29C5NC6NH31178.3°180.0°
H30C6NC7NH32179.9°180.0°
H30C6NC7NH3361.0°60.0°
H31C6NC7NH3260.8°60.0°
H31C6NC7NH33179.7°180.0°
H32C7NC8NH3459.4°180.0°
H32C7NC8NH3560.6°60.0°
H32C7NC8NH36179.4°60.0°
H33C7NC8NH3459.5°60.0°
H33C7NC8NH35179.5°180.0°
H33C7NC8NH3660.5°60.0°
H34C8NH35H36120.0°120.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon