TRO
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.45Å | |
| N | H | sing | 1.01Å | 1.02Å | |
| N | H2 | sing | 1.01Å | 1.02Å | |
| CA | CB | sing | 1.53Å | 1.52Å | |
| CA | C | sing | 1.51Å | 1.52Å | |
| CA | HA | sing | 1.09Å | 1.12Å | |
| CB | CG | sing | 1.51Å | 1.50Å | |
| CB | HB2 | sing | 1.09Å | 1.11Å | |
| CB | HB3 | sing | 1.09Å | 1.12Å | |
| CG | CD1 | doub | 1.35Å | 1.53Å | Aromatic |
| CG | CD2 | sing | 1.46Å | 1.51Å | Aromatic |
| CD1 | OD1 | sing | 1.36Å | 1.23Å | |
| CD1 | NE1 | sing | 1.37Å | 1.38Å | Aromatic |
| OD1 | HD1 | sing | 0.97Å | 0.95Å | |
| NE1 | CE2 | sing | 1.38Å | 1.38Å | Aromatic |
| NE1 | HE1 | sing | 0.97Å | 1.02Å | |
| CE2 | CZ2 | doub | 1.39Å | 1.41Å | Aromatic |
| CE2 | CD2 | sing | 1.41Å | 1.41Å | Aromatic |
| CZ2 | CH2 | sing | 1.38Å | 1.38Å | Aromatic |
| CZ2 | HZ2 | sing | 1.08Å | 1.10Å | |
| CH2 | CZ3 | doub | 1.39Å | 1.41Å | Aromatic |
| CH2 | HH2 | sing | 1.08Å | 1.10Å | |
| CZ3 | CE3 | sing | 1.37Å | 1.40Å | Aromatic |
| CZ3 | HZ3 | sing | 1.08Å | 1.10Å | |
| CE3 | CD2 | doub | 1.40Å | 1.40Å | Aromatic |
| CE3 | HE3 | sing | 1.08Å | 1.10Å | |
| C | O | doub | 1.21Å | 1.24Å | |
| C | OXT | sing | 1.34Å | 1.33Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 106.9° | 106.7° |
| CA | N | H2 | 113.1° | 106.7° |
| N | CA | CB | 106.9° | 109.5° |
| N | CA | C | 109.1° | 109.4° |
| N | CA | HA | 111.3° | 109.4° |
| H | N | H2 | 113.2° | 106.7° |
| CB | CA | C | 109.2° | 109.5° |
| CB | CA | HA | 111.2° | 109.5° |
| CA | CB | CG | 113.6° | 109.5° |
| CA | CB | HB2 | 110.7° | 109.5° |
| CA | CB | HB3 | 110.7° | 109.4° |
| C | CA | HA | 109.1° | 109.5° |
| CA | C | O | 120.3° | 120.0° |
| CA | C | OXT | 116.6° | 120.0° |
| CG | CB | HB2 | 110.7° | 109.5° |
| CG | CB | HB3 | 110.7° | 109.5° |
| CB | CG | CD1 | 107.1° | 126.5° |
| CB | CG | CD2 | 111.9° | 126.6° |
| HB2 | CB | HB3 | 99.6° | 109.4° |
| CD1 | CG | CD2 | 103.8° | 107.0° |
| CG | CD1 | OD1 | 126.1° | 125.2° |
| CG | CD1 | NE1 | 105.1° | 109.8° |
| CG | CD2 | CE2 | 108.5° | 106.2° |
| CG | CD2 | CE3 | 132.5° | 133.9° |
| OD1 | CD1 | NE1 | 128.8° | 125.0° |
| CD1 | OD1 | HD1 | 126.0° | 106.8° |
| CD1 | NE1 | CE2 | 115.0° | 109.8° |
| CD1 | NE1 | HE1 | 122.8° | 125.1° |
| CE2 | NE1 | HE1 | 122.2° | 125.1° |
| NE1 | CE2 | CZ2 | 130.1° | 133.4° |
| NE1 | CE2 | CD2 | 107.6° | 107.2° |
| CZ2 | CE2 | CD2 | 122.3° | 119.4° |
| CE2 | CZ2 | CH2 | 117.5° | 119.8° |
| CE2 | CZ2 | HZ2 | 122.3° | 120.2° |
| CE2 | CD2 | CE3 | 119.0° | 119.9° |
| CH2 | CZ2 | HZ2 | 120.1° | 120.1° |
| CZ2 | CH2 | CZ3 | 121.3° | 120.6° |
| CZ2 | CH2 | HH2 | 118.1° | 119.7° |
| CZ3 | CH2 | HH2 | 120.6° | 119.7° |
| CH2 | CZ3 | CE3 | 121.1° | 120.5° |
| CH2 | CZ3 | HZ3 | 119.8° | 119.7° |
| CE3 | CZ3 | HZ3 | 119.1° | 119.8° |
| CZ3 | CE3 | CD2 | 118.8° | 119.8° |
| CZ3 | CE3 | HE3 | 120.5° | 120.1° |
| CD2 | CE3 | HE3 | 120.7° | 120.1° |
| O | C | OXT | 123.0° | 120.0° |
| C | OXT | HXT | 116.6° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 125.2° | 113.8° |
| N | CA | CB | C | 117.9° | 120.0° |
| N | CA | CB | HA | 121.6° | 119.9° |
| N | CA | C | HA | 121.8° | 120.0° |
| N | CA | CB | CG | 63.4° | 60.0° |
| N | CA | CB | HB2 | 61.8° | 60.1° |
| N | CA | CB | HB3 | 171.3° | 180.0° |
| N | CA | C | O | 21.2° | 30.0° |
| N | CA | C | OXT | 157.6° | 149.9° |
| H | N | CA | CB | 180.0° | 53.8° |
| H | N | CA | C | 62.1° | 173.8° |
| H | N | CA | HA | 58.4° | 66.2° |
| H2 | N | CA | CB | 54.7° | 60.0° |
| H2 | N | CA | C | 172.6° | 60.0° |
| H2 | N | CA | HA | 66.9° | 179.9° |
| CB | CA | C | HA | 121.7° | 120.0° |
| CA | CB | CG | HB2 | 125.3° | 120.1° |
| CA | CB | CG | HB3 | 125.2° | 120.0° |
| CA | CB | HB2 | HB3 | 116.6° | 119.9° |
| CA | CB | CG | CD1 | 89.1° | 90.1° |
| CA | CB | CG | CD2 | 157.8° | 90.3° |
| CB | CA | C | O | 95.3° | 90.0° |
| CB | CA | C | OXT | 85.9° | 90.1° |
| C | CA | CB | CG | 178.7° | 180.0° |
| C | CA | CB | HB2 | 56.1° | 59.9° |
| C | CA | CB | HB3 | 53.4° | 60.0° |
| CA | C | O | OXT | 178.7° | 179.9° |
| CA | C | OXT | HXT | 180.0° | 180.0° |
| HA | CA | CB | CG | 58.2° | 59.9° |
| HA | CA | CB | HB2 | 176.5° | 180.0° |
| HA | CA | CB | HB3 | 67.0° | 60.1° |
| HA | CA | C | O | 143.0° | 149.9° |
| HA | CA | C | OXT | 35.8° | 30.0° |
| CG | CB | HB2 | HB3 | 116.5° | 120.0° |
| CB | CG | CD1 | CD2 | 118.5° | 179.7° |
| CB | CG | CD1 | OD1 | 59.8° | 0.0° |
| CB | CG | CD1 | NE1 | 117.7° | 179.9° |
| CB | CG | CD2 | CE2 | 114.5° | 179.9° |
| CB | CG | CD2 | CE3 | 65.0° | 0.8° |
| HB2 | CB | CG | CD1 | 145.6° | 30.0° |
| HB2 | CB | CG | CD2 | 32.5° | 149.7° |
| HB3 | CB | CG | CD1 | 36.2° | 150.0° |
| HB3 | CB | CG | CD2 | 77.0° | 29.7° |
| CG | CD1 | OD1 | NE1 | 177.0° | 179.9° |
| CG | CD1 | OD1 | HD1 | 180.0° | 89.9° |
| CG | CD1 | NE1 | CE2 | 0.7° | 0.0° |
| CG | CD1 | NE1 | HE1 | 179.3° | 180.0° |
| CD1 | CG | CD2 | CE2 | 0.7° | 0.4° |
| CD1 | CG | CD2 | CE3 | 179.8° | 179.5° |
| CD2 | CG | CD1 | OD1 | 178.4° | 179.7° |
| CD2 | CG | CD1 | NE1 | 0.8° | 0.2° |
| CG | CD2 | CE2 | NE1 | 0.3° | 0.3° |
| CG | CD2 | CE2 | CZ2 | 179.3° | 179.9° |
| CG | CD2 | CE2 | CE3 | 179.6° | 179.3° |
| CG | CD2 | CE3 | CZ3 | 179.1° | 179.6° |
| CG | CD2 | CE3 | HE3 | 0.9° | 0.7° |
| OD1 | CD1 | NE1 | CE2 | 178.1° | 179.9° |
| OD1 | CD1 | NE1 | HE1 | 1.9° | 0.0° |
| NE1 | CD1 | OD1 | HD1 | 3.1° | 90.0° |
| CD1 | NE1 | CE2 | HE1 | 180.0° | 180.0° |
| CD1 | NE1 | CE2 | CZ2 | 179.8° | 180.0° |
| CD1 | NE1 | CE2 | CD2 | 0.2° | 0.2° |
| NE1 | CE2 | CZ2 | CD2 | 179.5° | 179.7° |
| NE1 | CE2 | CZ2 | CH2 | 179.6° | 180.0° |
| NE1 | CE2 | CZ2 | HZ2 | 0.4° | 0.1° |
| NE1 | CE2 | CD2 | CE3 | 179.9° | 179.7° |
| HE1 | NE1 | CE2 | CZ2 | 0.2° | 0.0° |
| HE1 | NE1 | CE2 | CD2 | 179.8° | 179.8° |
| CE2 | CZ2 | CH2 | HZ2 | 180.0° | 180.0° |
| CE2 | CZ2 | CH2 | CZ3 | 0.0° | 0.0° |
| CE2 | CZ2 | CH2 | HH2 | 180.0° | 180.0° |
| CZ2 | CE2 | CD2 | CE3 | 0.3° | 0.5° |
| CD2 | CE2 | CZ2 | CH2 | 0.1° | 0.2° |
| CD2 | CE2 | CZ2 | HZ2 | 179.9° | 179.8° |
| CE2 | CD2 | CE3 | CZ3 | 0.3° | 0.6° |
| CE2 | CD2 | CE3 | HE3 | 179.7° | 179.8° |
| CZ2 | CH2 | CZ3 | HH2 | 180.0° | 180.0° |
| CZ2 | CH2 | CZ3 | CE3 | 0.0° | 0.0° |
| CZ2 | CH2 | CZ3 | HZ3 | 180.0° | 180.0° |
| HZ2 | CZ2 | CH2 | CZ3 | 179.9° | 179.9° |
| HZ2 | CZ2 | CH2 | HH2 | 0.1° | 0.1° |
| CH2 | CZ3 | CE3 | HZ3 | 180.0° | 180.0° |
| CH2 | CZ3 | CE3 | CD2 | 0.2° | 0.3° |
| CH2 | CZ3 | CE3 | HE3 | 179.8° | 180.0° |
| HH2 | CH2 | CZ3 | CE3 | 180.0° | 180.0° |
| HH2 | CH2 | CZ3 | HZ3 | 0.0° | 0.0° |
| CZ3 | CE3 | CD2 | HE3 | 180.0° | 179.7° |
| HZ3 | CZ3 | CE3 | CD2 | 179.8° | 179.7° |
| HZ3 | CZ3 | CE3 | HE3 | 0.2° | 0.0° |
| O | C | OXT | HXT | 1.3° | 0.1° |
