TRN
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.45Å | |
| N | H | sing | 1.01Å | 1.02Å | |
| N | H2 | sing | 1.01Å | 1.02Å | |
| CA | CB | sing | 1.53Å | 1.52Å | |
| CA | C | sing | 1.51Å | 1.53Å | |
| CA | HA | sing | 1.09Å | 1.11Å | |
| CB | CG | sing | 1.51Å | 1.48Å | |
| CB | HB2 | sing | 1.09Å | 1.11Å | |
| CB | HB3 | sing | 1.09Å | 1.11Å | |
| CG | CD1 | doub | 1.34Å | 1.38Å | Aromatic |
| CG | CD2 | sing | 1.46Å | 1.43Å | Aromatic |
| CD1 | NE1 | sing | 1.37Å | 1.39Å | Aromatic |
| CD1 | HD1 | sing | 1.08Å | 1.10Å | |
| CD2 | CE2 | sing | 1.41Å | 1.41Å | Aromatic |
| CD2 | CE3 | doub | 1.40Å | 1.40Å | Aromatic |
| NE1 | CE2 | sing | 1.37Å | 1.37Å | Aromatic |
| NE1 | HE1 | sing | 0.97Å | 1.02Å | |
| CE2 | NZ2 | doub | 1.33Å | 1.35Å | Aromatic |
| CE3 | CZ3 | sing | 1.38Å | 1.39Å | Aromatic |
| CE3 | HE3 | sing | 1.08Å | 1.10Å | |
| NZ2 | CH2 | sing | 1.32Å | 1.36Å | Aromatic |
| CH2 | CZ3 | doub | 1.39Å | 1.41Å | Aromatic |
| CH2 | HH2 | sing | 1.08Å | 1.10Å | |
| CZ3 | HZ3 | sing | 1.08Å | 1.10Å | |
| C | O | doub | 1.21Å | 1.23Å | |
| C | OXT | sing | 1.34Å | 1.33Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 109.6° | 106.7° |
| CA | N | H2 | 112.1° | 106.7° |
| N | CA | CB | 109.6° | 109.5° |
| N | CA | C | 109.5° | 109.5° |
| N | CA | HA | 109.8° | 109.4° |
| H | N | H2 | 112.2° | 106.7° |
| CB | CA | C | 110.6° | 109.5° |
| CB | CA | HA | 108.7° | 109.4° |
| CA | CB | CG | 112.5° | 109.5° |
| CA | CB | HB2 | 111.1° | 109.4° |
| CA | CB | HB3 | 111.1° | 109.5° |
| C | CA | HA | 108.7° | 109.5° |
| CA | C | O | 121.2° | 120.0° |
| CA | C | OXT | 116.0° | 120.0° |
| CG | CB | HB2 | 111.1° | 109.5° |
| CG | CB | HB3 | 111.0° | 109.5° |
| CB | CG | CD1 | 127.3° | 126.6° |
| CB | CG | CD2 | 126.4° | 126.6° |
| HB2 | CB | HB3 | 99.3° | 109.5° |
| CD1 | CG | CD2 | 106.1° | 106.9° |
| CG | CD1 | NE1 | 109.9° | 109.9° |
| CG | CD1 | HD1 | 124.9° | 125.1° |
| CG | CD2 | CE2 | 107.5° | 106.2° |
| CG | CD2 | CE3 | 134.3° | 134.3° |
| NE1 | CD1 | HD1 | 125.2° | 125.0° |
| CD1 | NE1 | CE2 | 108.8° | 110.0° |
| CD1 | NE1 | HE1 | 126.0° | 124.9° |
| CE2 | CD2 | CE3 | 118.2° | 119.4° |
| CD2 | CE2 | NE1 | 107.7° | 107.0° |
| CD2 | CE2 | NZ2 | 126.6° | 119.9° |
| CD2 | CE3 | CZ3 | 117.2° | 118.1° |
| CD2 | CE3 | HE3 | 121.8° | 121.0° |
| CE2 | NE1 | HE1 | 125.2° | 125.0° |
| NE1 | CE2 | NZ2 | 125.7° | 133.2° |
| CE2 | NZ2 | CH2 | 113.4° | 121.7° |
| CZ3 | CE3 | HE3 | 121.0° | 121.0° |
| CE3 | CZ3 | CH2 | 120.1° | 119.4° |
| CE3 | CZ3 | HZ3 | 119.0° | 120.3° |
| NZ2 | CH2 | CZ3 | 124.5° | 121.5° |
| NZ2 | CH2 | HH2 | 115.8° | 119.3° |
| CZ3 | CH2 | HH2 | 119.7° | 119.2° |
| CH2 | CZ3 | HZ3 | 120.8° | 120.3° |
| O | C | OXT | 122.8° | 119.9° |
| C | OXT | HXT | 116.0° | 120.1° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 125.2° | 113.7° |
| N | CA | CB | C | 120.8° | 120.1° |
| N | CA | CB | HA | 120.0° | 120.0° |
| N | CA | C | HA | 119.9° | 120.0° |
| N | CA | CB | CG | 174.8° | 59.9° |
| N | CA | CB | HB2 | 60.0° | 60.0° |
| N | CA | CB | HB3 | 49.6° | 180.0° |
| N | CA | C | O | 131.1° | 30.0° |
| N | CA | C | OXT | 48.6° | 149.9° |
| H | N | CA | CB | 180.0° | 53.7° |
| H | N | CA | C | 58.5° | 173.8° |
| H | N | CA | HA | 60.7° | 66.2° |
| H2 | N | CA | CB | 54.7° | 60.0° |
| H2 | N | CA | C | 176.2° | 60.0° |
| H2 | N | CA | HA | 64.5° | 180.0° |
| CB | CA | C | HA | 119.2° | 119.9° |
| CA | CB | CG | HB2 | 125.3° | 119.9° |
| CA | CB | CG | HB3 | 125.2° | 120.1° |
| CA | CB | HB2 | HB3 | 117.0° | 120.0° |
| CA | CB | CG | CD1 | 82.1° | 90.0° |
| CA | CB | CG | CD2 | 93.7° | 90.3° |
| CB | CA | C | O | 108.0° | 90.1° |
| CB | CA | C | OXT | 72.3° | 90.0° |
| C | CA | CB | CG | 53.9° | 180.0° |
| C | CA | CB | HB2 | 179.2° | 60.0° |
| C | CA | CB | HB3 | 71.3° | 59.9° |
| CA | C | O | OXT | 179.7° | 179.9° |
| CA | C | OXT | HXT | 179.9° | 180.0° |
| HA | CA | CB | CG | 65.3° | 60.1° |
| HA | CA | CB | HB2 | 60.0° | 180.0° |
| HA | CA | CB | HB3 | 169.5° | 60.0° |
| HA | CA | C | O | 11.2° | 149.9° |
| HA | CA | C | OXT | 168.5° | 30.0° |
| CG | CB | HB2 | HB3 | 116.9° | 120.0° |
| CB | CG | CD1 | CD2 | 176.5° | 179.7° |
| CB | CG | CD1 | NE1 | 175.8° | 180.0° |
| CB | CG | CD1 | HD1 | 4.2° | 0.1° |
| CB | CG | CD2 | CE2 | 175.9° | 179.9° |
| CB | CG | CD2 | CE3 | 3.9° | 0.7° |
| HB2 | CB | CG | CD1 | 43.2° | 30.0° |
| HB2 | CB | CG | CD2 | 141.1° | 149.7° |
| HB3 | CB | CG | CD1 | 152.7° | 150.0° |
| HB3 | CB | CG | CD2 | 31.6° | 29.7° |
| CG | CD1 | NE1 | HD1 | 180.0° | 179.9° |
| CD1 | CG | CD2 | CE2 | 0.6° | 0.3° |
| CD1 | CG | CD2 | CE3 | 179.6° | 179.5° |
| CG | CD1 | NE1 | CE2 | 0.6° | 0.1° |
| CG | CD1 | NE1 | HE1 | 179.4° | 179.9° |
| CD2 | CG | CD1 | NE1 | 0.7° | 0.2° |
| CD2 | CG | CD1 | HD1 | 179.3° | 179.8° |
| CG | CD2 | CE2 | CE3 | 179.8° | 179.3° |
| CG | CD2 | CE2 | NE1 | 0.3° | 0.3° |
| CG | CD2 | CE2 | NZ2 | 180.0° | 179.8° |
| CG | CD2 | CE3 | CZ3 | 179.8° | 179.6° |
| CG | CD2 | CE3 | HE3 | 0.2° | 0.7° |
| CD1 | NE1 | CE2 | CD2 | 0.2° | 0.2° |
| CD1 | NE1 | CE2 | HE1 | 180.0° | 179.8° |
| CD1 | NE1 | CE2 | NZ2 | 179.6° | 180.0° |
| HD1 | CD1 | NE1 | CE2 | 179.5° | 180.0° |
| HD1 | CD1 | NE1 | HE1 | 0.6° | 0.2° |
| CD2 | CE2 | NE1 | NZ2 | 179.8° | 179.9° |
| CD2 | CE2 | NE1 | HE1 | 179.8° | 179.6° |
| CE2 | CD2 | CE3 | CZ3 | 0.0° | 0.5° |
| CE2 | CD2 | CE3 | HE3 | 180.0° | 179.8° |
| CD2 | CE2 | NZ2 | CH2 | 0.1° | 0.2° |
| CE3 | CD2 | CE2 | NE1 | 179.9° | 179.6° |
| CE3 | CD2 | CE2 | NZ2 | 0.1° | 0.5° |
| CD2 | CE3 | CZ3 | HE3 | 180.0° | 179.7° |
| CD2 | CE3 | CZ3 | CH2 | 0.1° | 0.3° |
| CD2 | CE3 | CZ3 | HZ3 | 179.9° | 179.8° |
| NE1 | CE2 | NZ2 | CH2 | 179.8° | 179.9° |
| HE1 | NE1 | CE2 | NZ2 | 0.4° | 0.2° |
| CE2 | NZ2 | CH2 | CZ3 | 0.0° | 0.0° |
| CE2 | NZ2 | CH2 | HH2 | 180.0° | 180.0° |
| CE3 | CZ3 | CH2 | NZ2 | 0.1° | 0.0° |
| CE3 | CZ3 | CH2 | HZ3 | 180.0° | 180.0° |
| CE3 | CZ3 | CH2 | HH2 | 180.0° | 179.9° |
| HE3 | CE3 | CZ3 | CH2 | 179.9° | 180.0° |
| HE3 | CE3 | CZ3 | HZ3 | 0.1° | 0.1° |
| NZ2 | CH2 | CZ3 | HH2 | 180.0° | 179.9° |
| NZ2 | CH2 | CZ3 | HZ3 | 179.9° | 180.0° |
| HH2 | CH2 | CZ3 | HZ3 | 0.1° | 0.0° |
| O | C | OXT | HXT | 0.4° | 0.1° |
