TRK
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | C10 | sing | 1.34Å | 1.36Å | |
N | C11 | sing | 1.47Å | 1.47Å | |
C1 | O1 | sing | 1.43Å | 1.47Å | |
C1 | C2 | sing | 1.53Å | 1.52Å | |
C1 | C14 | sing | 1.53Å | 1.54Å | |
O1 | C17 | sing | 1.44Å | 1.44Å | |
C2 | C3 | sing | 1.53Å | 1.55Å | |
C2 | C4 | sing | 1.51Å | 1.54Å | |
O2 | C10 | doub | 1.22Å | 1.25Å | |
O3 | C12 | doub | 1.22Å | 1.31Å | |
C4 | C5 | doub | 1.34Å | 1.34Å | |
O4 | C8 | sing | 1.35Å | 1.30Å | |
C5 | C6 | sing | 1.42Å | 1.47Å | |
C5 | C13 | sing | 1.51Å | 1.55Å | |
O5 | C16 | sing | 1.43Å | 1.46Å | |
O5 | C17 | sing | 1.43Å | 1.44Å | |
C6 | C7 | doub | 1.36Å | 1.33Å | |
O6 | C22 | doub | 1.21Å | 1.21Å | |
C7 | C8 | sing | 1.41Å | 1.48Å | |
C8 | C9 | doub | 1.40Å | 1.47Å | |
C9 | C10 | sing | 1.46Å | 1.47Å | |
C9 | C12 | sing | 1.41Å | 1.46Å | |
C11 | C12 | sing | 1.51Å | 1.51Å | |
C14 | C15 | sing | 1.53Å | 1.53Å | |
C14 | C16 | sing | 1.53Å | 1.54Å | |
C16 | C22 | sing | 1.51Å | 1.53Å | |
C17 | C18 | sing | 1.53Å | 1.52Å | |
C17 | C19 | sing | 1.51Å | 1.55Å | |
C19 | C20 | sing | 1.51Å | 1.50Å | |
C19 | C21 | doub | 1.33Å | 1.38Å | |
C21 | C22 | sing | 1.47Å | 1.50Å | |
N | H | sing | 0.97Å | 1.00Å | |
C11 | H111 | sing | 1.09Å | 1.10Å | |
C11 | H112 | sing | 1.09Å | 1.10Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
C14 | H14 | sing | 1.09Å | 1.10Å | |
C3 | H31C | sing | 1.09Å | 1.10Å | |
C3 | H32C | sing | 1.09Å | 1.10Å | |
C3 | H33C | sing | 1.09Å | 1.10Å | |
C4 | H4 | sing | 1.08Å | 1.08Å | |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C13 | H131 | sing | 1.09Å | 1.10Å | |
C13 | H132 | sing | 1.09Å | 1.10Å | |
C13 | H133 | sing | 1.09Å | 1.10Å | |
C16 | H16 | sing | 1.09Å | 1.10Å | |
C7 | H7 | sing | 1.08Å | 1.08Å | |
C15 | H151 | sing | 1.09Å | 1.10Å | |
C15 | H152 | sing | 1.09Å | 1.10Å | |
C15 | H153 | sing | 1.09Å | 1.10Å | |
C18 | H181 | sing | 1.09Å | 1.10Å | |
C18 | H182 | sing | 1.09Å | 1.10Å | |
C18 | H183 | sing | 1.09Å | 1.10Å | |
C20 | H201 | sing | 1.09Å | 1.10Å | |
C20 | H202 | sing | 1.09Å | 1.10Å | |
C20 | H203 | sing | 1.09Å | 1.10Å | |
C21 | H21 | sing | 1.08Å | 1.08Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C10 | N | C11 | 109.5° | 109.0° |
N | C10 | O2 | 124.4° | 124.7° |
N | C10 | C9 | 115.6° | 110.6° |
C10 | N | H | 125.2° | 125.5° |
N | C11 | C12 | 101.5° | 106.2° |
C11 | N | H | 125.3° | 125.5° |
N | C11 | H111 | 112.2° | 110.1° |
N | C11 | H112 | 112.2° | 110.1° |
O1 | C1 | C2 | 106.7° | 109.5° |
O1 | C1 | C14 | 111.3° | 109.0° |
C1 | O1 | C17 | 114.0° | 112.5° |
O1 | C1 | H1 | 111.5° | 109.6° |
C2 | C1 | C14 | 113.3° | 109.6° |
C1 | C2 | C3 | 109.4° | 109.5° |
C1 | C2 | C4 | 110.4° | 109.5° |
C2 | C1 | H1 | 109.4° | 109.5° |
C1 | C2 | H2 | 108.0° | 109.5° |
C1 | C14 | C15 | 111.4° | 109.4° |
C1 | C14 | C16 | 114.3° | 109.7° |
C14 | C1 | H1 | 104.7° | 109.7° |
C1 | C14 | H14 | 105.4° | 109.5° |
O1 | C17 | O5 | 110.1° | 108.3° |
O1 | C17 | C18 | 107.1° | 109.7° |
O1 | C17 | C19 | 110.6° | 108.2° |
C3 | C2 | C4 | 106.6° | 109.5° |
C3 | C2 | H2 | 111.7° | 109.4° |
C2 | C3 | H31C | 109.5° | 109.5° |
C2 | C3 | H32C | 109.5° | 109.5° |
C2 | C3 | H33C | 109.5° | 109.5° |
C2 | C4 | C5 | 122.6° | 120.0° |
C4 | C2 | H2 | 110.7° | 109.5° |
C2 | C4 | H4 | 118.7° | 120.0° |
O2 | C10 | C9 | 119.8° | 124.7° |
O3 | C12 | C9 | 122.2° | 127.1° |
O3 | C12 | C11 | 123.9° | 127.1° |
C4 | C5 | C6 | 118.0° | 120.0° |
C4 | C5 | C13 | 121.8° | 120.0° |
C5 | C4 | H4 | 118.7° | 120.0° |
O4 | C8 | C7 | 123.7° | 120.0° |
O4 | C8 | C9 | 115.2° | 120.0° |
C8 | O4 | HO4 | 109.5° | 114.0° |
C6 | C5 | C13 | 120.1° | 120.0° |
C5 | C6 | C7 | 119.8° | 120.0° |
C5 | C6 | H6 | 120.1° | 120.0° |
C5 | C13 | H131 | 109.5° | 109.5° |
C5 | C13 | H132 | 109.5° | 109.4° |
C5 | C13 | H133 | 109.5° | 109.5° |
C16 | O5 | C17 | 112.7° | 113.2° |
O5 | C16 | C14 | 109.5° | 109.5° |
O5 | C16 | C22 | 108.6° | 107.6° |
O5 | C16 | H16 | 109.7° | 109.7° |
O5 | C17 | C18 | 109.4° | 109.7° |
O5 | C17 | C19 | 110.0° | 110.4° |
C6 | C7 | C8 | 121.4° | 120.0° |
C7 | C6 | H6 | 120.1° | 120.0° |
C6 | C7 | H7 | 119.3° | 120.0° |
O6 | C22 | C16 | 118.4° | 121.2° |
O6 | C22 | C21 | 122.1° | 121.1° |
C7 | C8 | C9 | 120.9° | 120.0° |
C8 | C7 | H7 | 119.3° | 120.0° |
C8 | C9 | C10 | 128.7° | 125.8° |
C8 | C9 | C12 | 131.8° | 125.9° |
C10 | C9 | C12 | 99.4° | 108.4° |
C9 | C12 | C11 | 113.9° | 105.9° |
C12 | C11 | H111 | 112.2° | 110.1° |
C12 | C11 | H112 | 112.2° | 110.1° |
C15 | C14 | C16 | 111.7° | 109.4° |
C15 | C14 | H14 | 108.4° | 109.4° |
C14 | C15 | H151 | 109.5° | 109.5° |
C14 | C15 | H152 | 109.5° | 109.5° |
C14 | C15 | H153 | 109.5° | 109.5° |
C14 | C16 | C22 | 108.3° | 110.0° |
C16 | C14 | H14 | 105.1° | 109.4° |
C14 | C16 | H16 | 109.9° | 109.6° |
C16 | C22 | C21 | 118.8° | 117.7° |
C22 | C16 | H16 | 110.8° | 110.3° |
C18 | C17 | C19 | 109.6° | 110.5° |
C17 | C18 | H181 | 109.5° | 109.5° |
C17 | C18 | H182 | 109.5° | 109.4° |
C17 | C18 | H183 | 109.5° | 109.5° |
C17 | C19 | C20 | 117.4° | 119.3° |
C17 | C19 | C21 | 122.0° | 121.5° |
C20 | C19 | C21 | 120.6° | 119.2° |
C19 | C20 | H201 | 109.5° | 109.5° |
C19 | C20 | H202 | 109.5° | 109.4° |
C19 | C20 | H203 | 109.4° | 109.5° |
C19 | C21 | C22 | 117.4° | 119.3° |
C19 | C21 | H21 | 121.3° | 120.3° |
C22 | C21 | H21 | 121.3° | 120.4° |
H111 | C11 | H112 | 106.6° | 110.2° |
H31C | C3 | H32C | 109.5° | 109.4° |
H31C | C3 | H33C | 109.4° | 109.5° |
H32C | C3 | H33C | 109.5° | 109.4° |
H131 | C13 | H132 | 109.4° | 109.5° |
H131 | C13 | H133 | 109.5° | 109.5° |
H132 | C13 | H133 | 109.5° | 109.5° |
H151 | C15 | H152 | 109.5° | 109.4° |
H151 | C15 | H153 | 109.5° | 109.5° |
H152 | C15 | H153 | 109.4° | 109.5° |
H181 | C18 | H182 | 109.5° | 109.5° |
H181 | C18 | H183 | 109.5° | 109.5° |
H182 | C18 | H183 | 109.4° | 109.5° |
H201 | C20 | H202 | 109.5° | 109.5° |
H201 | C20 | H203 | 109.5° | 109.5° |
H202 | C20 | H203 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C10 | N | C11 | H | 180.0° | 179.8° |
N | C10 | O2 | C9 | 175.0° | 179.9° |
N | C10 | C9 | C8 | 179.3° | 180.0° |
N | C10 | C9 | C12 | 3.4° | 0.0° |
C10 | N | C11 | C12 | 1.4° | 0.0° |
C10 | N | C11 | H111 | 118.6° | 119.2° |
C10 | N | C11 | H112 | 121.4° | 119.2° |
C11 | N | C10 | O2 | 178.4° | 179.9° |
N | C11 | C12 | O3 | 179.6° | 180.0° |
C11 | N | C10 | C9 | 3.2° | 0.0° |
N | C11 | C12 | C9 | 0.7° | 0.0° |
N | C11 | C12 | H111 | 120.0° | 119.1° |
N | C11 | C12 | H112 | 120.0° | 119.2° |
N | C11 | H111 | H112 | 123.2° | 121.6° |
O1 | C1 | C2 | C14 | 122.8° | 119.5° |
O1 | C1 | C2 | H1 | 120.8° | 120.2° |
O1 | C1 | C14 | H1 | 120.6° | 120.0° |
O1 | C1 | C2 | C3 | 71.2° | 64.8° |
O1 | C1 | C2 | C4 | 45.8° | 55.2° |
C1 | O1 | C17 | O5 | 59.7° | 62.7° |
O1 | C1 | C14 | C15 | 169.2° | 172.9° |
O1 | C1 | C14 | C16 | 41.4° | 52.8° |
C1 | O1 | C17 | C18 | 178.6° | 177.6° |
C1 | O1 | C17 | C19 | 62.1° | 57.0° |
O1 | C1 | C2 | H2 | 167.0° | 175.2° |
O1 | C1 | C14 | H14 | 73.5° | 67.2° |
C2 | C1 | C14 | H1 | 119.2° | 120.2° |
C2 | C1 | O1 | C17 | 172.4° | 179.2° |
C1 | C2 | C3 | C4 | 119.4° | 120.0° |
C1 | C2 | C3 | H2 | 119.6° | 120.0° |
C1 | C2 | C4 | H2 | 119.6° | 120.0° |
C1 | C2 | C4 | C5 | 97.7° | 126.5° |
C2 | C1 | C14 | C15 | 70.6° | 67.3° |
C2 | C1 | C14 | C16 | 161.6° | 172.6° |
C2 | C1 | C14 | H14 | 46.8° | 52.6° |
C1 | C2 | C3 | H31C | 180.0° | 56.6° |
C1 | C2 | C3 | H32C | 60.0° | 63.4° |
C1 | C2 | C3 | H33C | 60.0° | 176.6° |
C1 | C2 | C4 | H4 | 82.3° | 53.5° |
C14 | C1 | O1 | C17 | 48.4° | 59.4° |
C14 | C1 | C2 | C3 | 166.0° | 175.7° |
C14 | C1 | C2 | C4 | 77.0° | 64.3° |
C1 | C14 | C16 | O5 | 44.9° | 51.7° |
C1 | C14 | C15 | C16 | 129.2° | 120.3° |
C1 | C14 | C15 | H14 | 115.5° | 119.9° |
C1 | C14 | C16 | H14 | 115.0° | 120.1° |
C1 | C14 | C16 | C22 | 73.3° | 66.3° |
C14 | C1 | C2 | H2 | 44.2° | 55.7° |
C1 | C14 | C16 | H16 | 165.5° | 172.2° |
C1 | C14 | C15 | H151 | 180.0° | 53.4° |
C1 | C14 | C15 | H152 | 60.0° | 173.3° |
C1 | C14 | C15 | H153 | 60.0° | 66.7° |
O1 | C17 | O5 | C16 | 64.0° | 61.5° |
O1 | C17 | O5 | C18 | 117.5° | 119.7° |
O1 | C17 | O5 | C19 | 122.1° | 118.3° |
O1 | C17 | C18 | C19 | 120.0° | 119.2° |
O1 | C17 | C19 | C20 | 82.5° | 85.9° |
O1 | C17 | C19 | C21 | 98.9° | 94.1° |
C17 | O1 | C1 | H1 | 68.1° | 60.6° |
O1 | C17 | C18 | H181 | 180.0° | 60.0° |
O1 | C17 | C18 | H182 | 60.0° | 180.0° |
O1 | C17 | C18 | H183 | 60.0° | 60.0° |
C3 | C2 | C4 | H2 | 121.7° | 120.0° |
C3 | C2 | C4 | C5 | 143.5° | 113.5° |
C3 | C2 | C1 | H1 | 49.6° | 55.4° |
C2 | C3 | H31C | H32C | 120.0° | 120.0° |
C2 | C3 | H31C | H33C | 120.0° | 120.1° |
C2 | C3 | H32C | H33C | 120.0° | 120.0° |
C3 | C2 | C4 | H4 | 36.5° | 66.5° |
C2 | C4 | C5 | H4 | 180.0° | 180.0° |
C2 | C4 | C5 | C6 | 176.8° | 174.4° |
C2 | C4 | C5 | C13 | 0.1° | 5.6° |
C4 | C2 | C1 | H1 | 166.6° | 175.4° |
C4 | C2 | C3 | H31C | 60.6° | 63.4° |
C4 | C2 | C3 | H32C | 59.4° | 176.6° |
C4 | C2 | C3 | H33C | 179.4° | 56.6° |
O2 | C10 | C9 | C8 | 3.8° | 0.0° |
O2 | C10 | C9 | C12 | 178.8° | 179.9° |
O2 | C10 | N | H | 1.7° | 0.2° |
O3 | C12 | C9 | C8 | 1.5° | 0.0° |
O3 | C12 | C9 | C10 | 178.8° | 180.0° |
O3 | C12 | C9 | C11 | 178.9° | 180.0° |
O3 | C12 | C11 | H111 | 60.4° | 60.9° |
O3 | C12 | C11 | H112 | 59.6° | 60.9° |
C4 | C5 | C6 | C13 | 176.9° | 180.0° |
C4 | C5 | C6 | C7 | 157.1° | 180.0° |
C5 | C4 | C2 | H2 | 21.9° | 6.5° |
C4 | C5 | C6 | H6 | 22.9° | 0.0° |
C4 | C5 | C13 | H131 | 180.0° | 87.8° |
C4 | C5 | C13 | H132 | 60.0° | 152.2° |
C4 | C5 | C13 | H133 | 60.0° | 32.2° |
O4 | C8 | C7 | C6 | 3.2° | 0.0° |
O4 | C8 | C7 | C9 | 175.5° | 179.9° |
O4 | C8 | C9 | C10 | 3.0° | 0.0° |
O4 | C8 | C9 | C12 | 179.5° | 180.0° |
O4 | C8 | C7 | H7 | 176.8° | 180.0° |
C5 | C6 | C7 | H6 | 180.0° | 180.0° |
C5 | C6 | C7 | C8 | 175.5° | 180.0° |
C6 | C5 | C4 | H4 | 3.2° | 5.7° |
C6 | C5 | C13 | H131 | 3.2° | 92.1° |
C6 | C5 | C13 | H132 | 116.8° | 27.8° |
C6 | C5 | C13 | H133 | 123.2° | 147.8° |
C5 | C6 | C7 | H7 | 4.6° | 0.0° |
C13 | C5 | C6 | C7 | 26.0° | 0.0° |
C13 | C5 | C4 | H4 | 179.9° | 174.4° |
C13 | C5 | C6 | H6 | 154.0° | 180.0° |
C5 | C13 | H131 | H132 | 120.0° | 119.9° |
C5 | C13 | H131 | H133 | 120.0° | 120.0° |
C5 | C13 | H132 | H133 | 120.0° | 120.0° |
O5 | C16 | C22 | O6 | 157.8° | 143.6° |
O5 | C16 | C14 | C15 | 172.5° | 171.8° |
O5 | C16 | C14 | C22 | 118.2° | 118.0° |
O5 | C16 | C14 | H16 | 120.6° | 120.5° |
O5 | C16 | C22 | H16 | 120.6° | 119.6° |
C16 | O5 | C17 | C18 | 178.4° | 178.8° |
C16 | O5 | C17 | C19 | 58.1° | 56.8° |
O5 | C16 | C22 | C21 | 30.9° | 36.3° |
O5 | C16 | C14 | H14 | 70.2° | 68.3° |
C17 | O5 | C16 | C14 | 56.1° | 57.4° |
C17 | O5 | C16 | C22 | 61.9° | 62.2° |
O5 | C17 | C18 | C19 | 120.6° | 121.9° |
O5 | C17 | C19 | C20 | 155.6° | 155.7° |
O5 | C17 | C19 | C21 | 22.9° | 24.3° |
C17 | O5 | C16 | H16 | 176.9° | 177.8° |
O5 | C17 | C18 | H181 | 60.6° | 58.8° |
O5 | C17 | C18 | H182 | 179.3° | 61.2° |
O5 | C17 | C18 | H183 | 59.4° | 178.8° |
C6 | C7 | C8 | H7 | 180.0° | 179.9° |
C6 | C7 | C8 | C9 | 178.6° | 180.0° |
O6 | C22 | C16 | C14 | 83.4° | 97.2° |
O6 | C22 | C16 | C21 | 171.3° | 179.9° |
O6 | C22 | C21 | C19 | 169.9° | 172.5° |
O6 | C22 | C16 | H16 | 37.3° | 23.9° |
O6 | C22 | C21 | H21 | 10.1° | 7.5° |
C7 | C8 | C9 | C10 | 178.8° | 180.0° |
C7 | C8 | C9 | C12 | 4.7° | 0.1° |
C8 | C7 | C6 | H6 | 4.5° | 0.0° |
C7 | C8 | O4 | HO4 | 176.7° | 180.0° |
C8 | C9 | C10 | C12 | 177.4° | 180.0° |
C8 | C9 | C12 | C11 | 179.6° | 180.0° |
C9 | C8 | C7 | H7 | 1.4° | 0.1° |
C9 | C8 | O4 | HO4 | 1.0° | 0.0° |
C10 | C9 | C12 | C11 | 2.3° | 0.0° |
C9 | C10 | N | H | 176.8° | 179.8° |
C9 | C12 | C11 | H111 | 120.7° | 119.1° |
C9 | C12 | C11 | H112 | 119.2° | 119.2° |
C12 | C11 | N | H | 178.6° | 179.8° |
C12 | C11 | H111 | H112 | 123.2° | 121.7° |
C15 | C14 | C16 | H14 | 117.3° | 119.9° |
C15 | C14 | C16 | C22 | 54.4° | 53.8° |
C15 | C14 | C1 | H1 | 48.6° | 53.0° |
C15 | C14 | C16 | H16 | 66.9° | 67.7° |
C14 | C15 | H151 | H152 | 120.0° | 120.0° |
C14 | C15 | H151 | H153 | 120.0° | 120.1° |
C14 | C15 | H152 | H153 | 120.0° | 120.1° |
C14 | C16 | C22 | H16 | 120.7° | 121.1° |
C14 | C16 | C22 | C21 | 87.9° | 82.9° |
C16 | C14 | C1 | H1 | 79.2° | 67.1° |
C16 | C14 | C15 | H151 | 50.8° | 66.9° |
C16 | C14 | C15 | H152 | 170.8° | 53.0° |
C16 | C14 | C15 | H153 | 69.2° | 173.1° |
C16 | C22 | C21 | C19 | 1.1° | 7.4° |
C22 | C16 | C14 | H14 | 171.7° | 173.6° |
C16 | C22 | C21 | H21 | 178.9° | 172.6° |
C18 | C17 | C19 | C20 | 35.3° | 34.2° |
C18 | C17 | C19 | C21 | 143.2° | 145.8° |
C17 | C18 | H181 | H182 | 120.0° | 120.0° |
C17 | C18 | H181 | H183 | 120.0° | 120.0° |
C17 | C18 | H182 | H183 | 120.0° | 120.0° |
C17 | C19 | C20 | C21 | 178.6° | 180.0° |
C17 | C19 | C21 | C22 | 5.5° | 0.9° |
C19 | C17 | C18 | H181 | 60.0° | 179.2° |
C19 | C17 | C18 | H182 | 60.0° | 60.8° |
C19 | C17 | C18 | H183 | 180.0° | 59.2° |
C17 | C19 | C20 | H201 | 180.0° | 90.1° |
C17 | C19 | C20 | H202 | 60.0° | 150.0° |
C17 | C19 | C20 | H203 | 60.0° | 30.0° |
C17 | C19 | C21 | H21 | 174.5° | 179.1° |
C20 | C19 | C21 | C22 | 176.0° | 179.1° |
C19 | C20 | H201 | H202 | 120.0° | 120.0° |
C19 | C20 | H201 | H203 | 120.0° | 120.0° |
C19 | C20 | H202 | H203 | 120.0° | 120.0° |
C20 | C19 | C21 | H21 | 4.0° | 0.9° |
C19 | C21 | C22 | H21 | 180.0° | 180.0° |
C21 | C19 | C20 | H201 | 1.4° | 89.9° |
C21 | C19 | C20 | H202 | 121.4° | 30.0° |
C21 | C19 | C20 | H203 | 118.6° | 150.0° |
C21 | C22 | C16 | H16 | 151.4° | 156.0° |
H | N | C11 | H111 | 61.4° | 60.6° |
H | N | C11 | H112 | 58.6° | 61.0° |
H1 | C1 | C2 | H2 | 72.2° | 64.6° |
H1 | C1 | C14 | H14 | 165.9° | 172.9° |
H2 | C2 | C3 | H31C | 60.4° | 176.6° |
H2 | C2 | C3 | H32C | 179.5° | 56.6° |
H2 | C2 | C3 | H33C | 59.5° | 63.4° |
H2 | C2 | C4 | H4 | 158.1° | 173.5° |
H14 | C14 | C16 | H16 | 50.4° | 52.1° |
H14 | C14 | C15 | H151 | 64.5° | 173.3° |
H14 | C14 | C15 | H152 | 55.5° | 66.8° |
H14 | C14 | C15 | H153 | 175.5° | 53.3° |
H31C | C3 | H32C | H33C | 120.0° | 119.9° |
H6 | C6 | C7 | H7 | 175.5° | 179.9° |
H131 | C13 | H132 | H133 | 119.9° | 120.1° |
H151 | C15 | H152 | H153 | 120.0° | 120.0° |
H181 | C18 | H182 | H183 | 120.0° | 120.1° |
H201 | C20 | H202 | H203 | 120.0° | 120.0° |